BAC Information

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BAC

Clone NameB6Ng01-054E22
Chromosome2 (Build37)
Map Location 73,272,657 - 73,330,546
singlet/doubletdoublet
Overlap geneWipf1
Upstream geneB230120H23Rik, Cdca7, LOC383712, LOC635960, LOC100039928, 6430710C18Rik, Sp3, Hspe1-ps5, Gtpbp9, LOC620110, Sp9, 1700023B02Rik, Scrn3, Gpr155
Downstream geneChrna1, Chn1, Atf2, Atp5g3, LOC667729, LOC100040172
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-054E22.bB6Ng01-054E22.g
ACCDH877085DH877086
length3951,129
definitionDH877085|Mus musculus domesticus DNA, BAC clone: B6Ng01-054E22, 5' end.DH877086|Mus musculus domesticus DNA, BAC clone: B6Ng01-054E22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(73,272,657 - 73,273,057)(73,329,393 - 73,330,546)
sequence
actgtgtaaaccaggctggcctcgaactcagaaatcaacctttctgataa
catgacagagggaagcaactgggccttactcacagatgttcagaaatgta
gatcataagatggttaatttgcaaataccaaaaaatttacaaaatctctg
atgaattaagttaaccacactgaaactcaaacaaggaactaactaggaaa
aaaaaaagagccacccttttggaaagtgggaggaatcttgctaggacatc
atggtgagccctaaaatggaatgttctgtgcagggtggataacaatgatg
gaacgagagacatcacttgaaataaacgaacgtcactcgccttcacacga
tgagtcttggaagccatttcgaactgatgtggagggtgggggtgg
gaattccataatactgtgatgctatgtatgcaaaagacctgtaaggtaaa
aaagagagaataaaaaaatacatatataaaaaaaaaacaaaaagaaaaag
acaaggaaaaaagcctgacccaacattgtgaggcagtgacccaacaaaga
ctcccttgagcttgctttctgttggcatttactcctgggcatgccctacc
ctgaggaacagtttgtgtccccagtgagactcctttggagaacactaaat
tctaattttcaatttgctagtcattatcatttggagctagtatctgggtt
agggatggggcatgtgtccttcatcctctcagctctagggccccccctgg
aggagacctgtgtagcagcatggcttttctgtgtccctagccattctttt
tatgaacaaagaaactcctcatttcccttctatcttgattagccataaag
atgaacaaacagcttggttatttgcaatccagttccgtaaggttgaaaga
agccaacttggtgtatggcgtcaggccctgtggcatgccagatagtgagc
cagctagggagggagggagggctctgactttgggagcagatggtccaaag
cctgataattccagcttccattacattgcaaccacacaaacaacgttcca
ctgtgtggggcaccatcaggagaactttgtcaacctttcaacttcccttt
aactgctccaagggctcacagattccgtgcatgtagtcttttcgaatgag
tgggaaggggaaagcctttacatgatgtaatgccccaaaaatccccccac
agtttctgagggaagcagttgctctctgtctgtctggacaagctgacttc
agtgggacgctttttcctagacaacccagggcaatgtgcatggacggact
ctggctctcctctctcggagcctgaacagcaagaggactgttgcacgtgc
acaggaagtgacacttgatgctgtcagagcttgtatcaatcctaggtcac
acttattaactggttggggaaatcctttattctgaaagtgctctctcatt
gggacgataacctgaataataaatgattacttatgctaacaaagacggtt
atctaggcagctatcgattcttggcagtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_73272657_73273057
seq2: B6Ng01-054E22.b_44_444

seq1  GAATTCACTGTGTAAACCAGGCTGGCCTCGAACTCAGAAATCAACCTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGTGTAAACCAGGCTGGCCTCGAACTCAGAAATCAACCTTTC  50

seq1  TGATAACATGACAGAGGGAAGCAACTGGGCCTTACTCACAGATGTTCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAACATGACAGAGGGAAGCAACTGGGCCTTACTCACAGATGTTCAGA  100

seq1  AATGTAGATCATAAGATGGTTAATTTGCAAATACCAAAAAATTTACAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAGATCATAAGATGGTTAATTTGCAAATACCAAAAAATTTACAAAA  150

seq1  TCTCTGATGAATTAAGTTAACCACACTGAAACTCAAACAAGGAACTAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGATGAATTAAGTTAACCACACTGAAACTCAAACAAGGAACTAACT  200

seq1  AGGAAAAAAAAAAGAGCCACCCTTTTGGAAAGTGGGAGGAATCTTGCTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAAAAAAAGAGCCACCCTTTTGGAAAGTGGGAGGAATCTTGCTAG  250

seq1  GACATCATGGTGAGCCCTAAAATGGAATGTTCTGTGCAGGGTGGATAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATCATGGTGAGCCCTAAAATGGAATGTTCTGTGCAGGGTGGATAACA  300

seq1  ATGATGGAACGAGAGACATCACTTGAAATAAACGAACGTCACTCGCCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGGAACGAGAGACATCACTTGAAATAAACGAACGTCACTCGCCTTC  350

seq1  ACACGATGAGTCTTGGAAGCCATTTCGAACTGATGTGGAGGGTGGGGGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGATGAGTCTTGGAAGCCATTTCGAACTGATGTGGAGGGTGGGGGTG  400

seq1  G  401
      |
seq2  G  401

seq1: chr2_73329393_73330546
seq2: B6Ng01-054E22.g_65_1193 (reverse)

seq1  GACTGCCAAGAATCGATAGACTG-CTAGATAACAGTGCTTTTGTTTAAGC  49
      ||||||||||||||||||| ||| ||||||||| ||   ||||||  |||
seq2  GACTGCCAAGAATCGATAG-CTGCCTAGATAACCGT--CTTTGTT--AGC  45

seq1  ATAAGTAGATCAATTTTAATTATTCAGGTTTATCGTCCCAAATGGAGAGA  99
      ||||||| ||||   || |||||||||| ||||||||||||   ||||||
seq2  ATAAGTA-ATCA---TTTATTATTCAGG-TTATCGTCCCAA--TGAGAGA  88

seq1  GCCACCTTTCAAGAATTAAAGGGATTTCCCCCAAACCAGTAAATAAGTGG  149
      ||   ||||| |||||  || ||||||||||  ||||||| |||||||| 
seq2  GC--ACTTTC-AGAAT--AAAGGATTTCCCC--AACCAGTTAATAAGTG-  130

seq1  TGGACCTAGGATTTGATACCAAAGCTTCTGACAGCATCCAGTGTCACTTC  199
        ||||||||| |||||||  |||| |||||||||||| |||||||||||
seq2  -TGACCTAGGA-TTGATAC--AAGC-TCTGACAGCATCAAGTGTCACTTC  175

seq1  CTGTGCACGTGCAAACAGTCCTCTTGCTGTTCAGGCTCCGAGAGAGGAGA  249
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CTGTGCACGTGC-AACAGTCCTCTTGCTGTTCAGGCTCCGAGAGAGGAGA  224

seq1  GCCAGAGTCCGTCCATGCACATTGCCCTGGGTTGTCTAGGAAAAAGCGTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAGTCCGTCCATGCACATTGCCCTGGGTTGTCTAGGAAAAAGCGTC  274

seq1  CCACTGAAGTCAGCTTGTCCAGACAGACAGAGAGCAACTGCTTCCCTCAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGAAGTCAGCTTGTCCAGACAGACAGAGAGCAACTGCTTCCCTCAG  324

seq1  AAACTGTGGGGGGATTTTTGGGGCATTACATCATGTAAAGGCTTTCCCCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGTGGGGGGATTTTTGGGGCATTACATCATGTAAAGGCTTTCCCCT  374

seq1  TCCCACTCATTCGAAAAGACTACATGCACGGAATCTGTGAGCCCTTGGAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACTCATTCGAAAAGACTACATGCACGGAATCTGTGAGCCCTTGGAG  424

seq1  CAGTTAAAGGGAAGTTGAAAGGTTGACAAAGTTCTCCTGATGGTGCCCCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTAAAGGGAAGTTGAAAGGTTGACAAAGTTCTCCTGATGGTGCCCCA  474

seq1  CACAGTGGAACGTTGTTTGTGTGGTTGCAATGTAATGGAAGCTGGAATTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTGGAACGTTGTTTGTGTGGTTGCAATGTAATGGAAGCTGGAATTA  524

seq1  TCAGGCTTTGGACCATCTGCTCCCAAAGTCAGAGCCCTCCCTCCCTCCCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCTTTGGACCATCTGCTCCCAAAGTCAGAGCCCTCCCTCCCTCCCT  574

seq1  AGCTGGCTCACTATCTGGCATGCCACAGGGCCTGACGCCATACACCAAGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGCTCACTATCTGGCATGCCACAGGGCCTGACGCCATACACCAAGT  624

seq1  TGGCTTCTTTCAACCTTACGGAACTGGATTGCAAATAACCAAGCTGTTTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTCTTTCAACCTTACGGAACTGGATTGCAAATAACCAAGCTGTTTG  674

seq1  TTCATCTTTATGGCTAATCAAGATAGAAGGGAAATGAGGAGTTTCTTTGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCTTTATGGCTAATCAAGATAGAAGGGAAATGAGGAGTTTCTTTGT  724

seq1  TCATAAAAAGAATGGCTAGGGACACAGAAAAGCCATGCTGCTACACAGGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAAAAGAATGGCTAGGGACACAGAAAAGCCATGCTGCTACACAGGT  774

seq1  CTCCTCCAGGGGGGGCCCTAGAGCTGAGAGGATGAAGGACACATGCCCCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCAGGGGGGGCCCTAGAGCTGAGAGGATGAAGGACACATGCCCCA  824

seq1  TCCCTAACCCAGATACTAGCTCCAAATGATAATGACTAGCAAATTGAAAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTAACCCAGATACTAGCTCCAAATGATAATGACTAGCAAATTGAAAA  874

seq1  TTAGAATTTAGTGTTCTCCAAAGGAGTCTCACTGGGGACACAAACTGTTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAATTTAGTGTTCTCCAAAGGAGTCTCACTGGGGACACAAACTGTTC  924

seq1  CTCAGGGTAGGGCATGCCCAGGAGTAAATGCCAACAGAAAGCAAGCTCAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGGTAGGGCATGCCCAGGAGTAAATGCCAACAGAAAGCAAGCTCAA  974

seq1  GGGAGTCTTTGTTGGGTCACTGCCTCACAATGTTGGGTCAGGCTTTTTTC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTCTTTGTTGGGTCACTGCCTCACAATGTTGGGTCAGGCTTTTTTC  1024

seq1  CTTGTCTTTTTCTTTTTGTTTTTTTTTTATATATGTATTTTTTTATTCTC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCTTTTTCTTTTTGTTTTTTTTTTATATATGTATTTTTTTATTCTC  1074

seq1  TCTTTTTTACCTTACAGGTCTTTTGCATACATAGCATCACAGTATTATGG  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTTACCTTACAGGTCTTTTGCATACATAGCATCACAGTATTATGG  1124

seq1  AATTC  1154
      |||||
seq2  AATTC  1129