BAC Information

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BAC

Clone NameB6Ng01-054G07
Chromosome2 (Build37)
Map Location 150,974,969 - 150,976,050
singlet/doubletsinglet
Overlap genenone
Upstream geneEG245174, 3300002I08Rik, LOC100043832, OTTMUSG00000015730, LOC668924, OTTMUSG00000015743, LOC545472, Cst7, 2310001A20Rik, Acss1, Vsx1, Entpd6, LOC100043605, Pygb, Abhd12, Gins1, LOC668925, 4930519N13Rik, LOC668926, Nanp, LOC433486, LOC381390
Downstream gene4930442J19Rik, LOC100043839, LOC100043840, 4921509C19Rik, Nsfl1c, Fkbp1a, Sdcbp2, Snph, LOC668929, BC052486, 5430405G05Rik, Psmf1, Rspo4, Angpt4, 5430432M24Rik, 2310046K01Rik, Scrt2, Srxn1, Tcf15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-054G07.bB6Ng01-054G07.g
ACCDH877147DH877148
length1,0711,174
definitionDH877147|Mus musculus domesticus DNA, BAC clone: B6Ng01-054G07, 5' end.DH877148|Mus musculus domesticus DNA, BAC clone: B6Ng01-054G07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccataggctgtttaagcaaatggtatgtgtcgtccaatattgtca
ccaaaataaattgtccacaagggtctaaagctcagaaatattttagtgga
agtcaaagaaatataaaaatttattgattacagattgtgcaaaaaaaata
tctgggttcagaagctagcaactttcaattggagcctcctgtattgtgct
gcagaactctctgaagttgtagggtgtggtgaccacactattgatatgta
gaccttaggagttatcctgtattacgaggaaaggaagccttcctttccag
ggaaaataactataaagacatgaagcaagagacttttgtggaaagtactc
tgtaaaattcaagctgtttccagaaaaatttaaaataattgtcaatttgt
gaactgtataccctgaacaaacacaaacagtacaggacattgtgagcttt
gaatgtctaaactatgaaaattaaggttgtagcaattcttttagatagaa
tacagacagccataaagaccacactggaatggtcctcatggtcctcatgg
gatataagcagggagagagaaaaggaattttacaggagaaaggattttga
tggaagcatatctgaggttgaggcaacagtcaccctgggaagacagctct
ggtatagccaaataaaaaccctaagcctgggctggggatcaattcttgat
acacatagggccaagcatgaaccaacaaaaggctctaaggagggaatcta
atgtgcttacccttcctaccttcagtttgcccaatcatactgaaaatctg
gagaaagcaaaaggagtataatgaggcagagtatgccacctaccacggac
tgctggaacaagaggagaaactcccattggcaaaacttccccagcttgtc
cactaagcacacttcatgagcacgcagtggagagacagagagcagtgaca
cttttatgagagctctaccagaaagtctttagagcatcagcactgggact
ttactcagcatcatctatggatatgtcagctagttctgagaatcagaaac
agttgtcctcactgtgtgttt
gaattctctatttagctctgtactccactttttaatagggttatttggtt
ctctggagtctgccgtcttgagttctttgtatattttggatattagccct
ctatcagatgtagggttggtaaatatcttttccaaatctatgggttgcca
tttttttctattgatagtgccccttgcttgacagaagctttttcaatttt
atgaggtcccatttgtcaattcttgatcttagagcataagccattggtgt
tctgttcaggaacttttcccctgtgcctatgtgttcaaggcttttccccc
actttctcttctattagattcggtttatatggttttatgtggaggtcctt
gatctacctggacttgaactttgtgcaaggaaataggtatggattgattt
gcgttcttctacatgcagaccaccaatcgaaccatttgttgaaaatgctg
tcttttttccactgaatggttttggcttctttatcaaagatcaaatgacc
acaggtgtgtgggttcatttatgaatctttgattttattccattagtcta
attgcctatttctgtacaaataccatgtagtttttttttttccatcacta
ttgctctgtagtatagcttgaggtcagggatagtgattctctcagaagta
tttttattgttgagaatagtttttgctatcctgggttttttgttctttca
aatgaatttgagaattgttctttttaactttatgaagaattgagttggaa
ttttgattccatcagtaccaatcagaagatcaaaaactcaggtgacagca
gatgttgatgaggatgtagagaaagaggacactcctccattgttggtggg
attacaaactggtacaaccactctggaaattagtatagtggttcctcaga
aattgacatagtatactgagggcccagctgtactactcctgggattatac
ctaagatgttccactgtataggacacaagctccactatattctagagcct
tattataataacgaagctggaacatcaaatgtccttcacgagatgatcgg
agatgtgggggctataccaggattctccattgattaaaccatacttctga
tttcgcatgagactaaaatctcgtgagtacgacaaagaaccccgtatatc
tctgtagatatacacccaacgtcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_150974969_150976050
seq2: B6Ng01-054G07.b_46_1116 (reverse)

seq1  AAACACACAGTGAGGACACCTTGTTTCTGAATCTCAGAACTAGCCTTGGA  50
      |||||||||||||||||| | ||||||||| |||||||||||||    ||
seq2  AAACACACAGTGAGGACAAC-TGTTTCTGATTCTCAGAACTAGC---TGA  46

seq1  CATATCCATAGATGAATGCTGGGTAAAGTCCCAGTGCTGGATGCTCTAAA  100
      |||||||||||||| |||||| |||||||||||||||| |||||||||||
seq2  CATATCCATAGATG-ATGCTGAGTAAAGTCCCAGTGCT-GATGCTCTAAA  94

seq1  GACTTTCTGGTAGAGCTCTCATAAAAAGTGTCACTGCTCTCTGTCTCCTC  150
      |||||||||||||||||||||| ||||||||||||||||||||||| |||
seq2  GACTTTCTGGTAGAGCTCTCAT-AAAAGTGTCACTGCTCTCTGTCT-CTC  142

seq1  CACTGCGTTGCTCATGAAGTGTGCTTAGTGGACAAGCTGGGGGAAGTTTT  200
      ||||||| |||||||||||||||||||||||||||||| ||||||| |||
seq2  CACTGCG-TGCTCATGAAGTGTGCTTAGTGGACAAGCT-GGGGAAG-TTT  189

seq1  TGCCAATGGGAGTTTCTCCTCTTGTTCCAGCAGTCCGTGGTAGGTGGCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAATGGGAGTTTCTCCTCTTGTTCCAGCAGTCCGTGGTAGGTGGCAT  239

seq1  ACTCTGCCTCATTATACTCCTTTTGCCTTCTCCAGATTTTCAGTATGATT  300
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  ACTCTGCCTCATTATACTCCTTTTGCTTTCTCCAGATTTTCAGTATGATT  289

seq1  GGGCAAACTGAAGGTAGGAAGGGTAAGCACATTAGATTCCCTCCTTAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAAACTGAAGGTAGGAAGGGTAAGCACATTAGATTCCCTCCTTAGAG  339

seq1  CCTTTTGTTGGTTCATGCTTGGCCCTATGTGTATCAAGAATTGATCCCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTGTTGGTTCATGCTTGGCCCTATGTGTATCAAGAATTGATCCCCA  389

seq1  GCCCAGGCTTAGGGTTTTTATTTGGCTATACCAGAGCTGTCTTCCCAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGGCTTAGGGTTTTTATTTGGCTATACCAGAGCTGTCTTCCCAGGG  439

seq1  TGACTGTTGCCTCAACCTCAGATATGCTTCCATCAAAATCCTTTCTCCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGTTGCCTCAACCTCAGATATGCTTCCATCAAAATCCTTTCTCCTG  489

seq1  TAAAATTCCTTTTCTCTCTCCCTGCTTATATCCCATGAGGACCATGAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTCCTTTTCTCTCTCCCTGCTTATATCCCATGAGGACCATGAGGA  539

seq1  CCATTCCAGTGTGGTCTTTATGGCTGTCTGTATTCTATCTAAAAGAATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCCAGTGTGGTCTTTATGGCTGTCTGTATTCTATCTAAAAGAATTG  589

seq1  CTACAACCTTAATTTTCATAGTTTAGACATTCAAAGCTCACAATGTCCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAACCTTAATTTTCATAGTTTAGACATTCAAAGCTCACAATGTCCTG  639

seq1  TACTGTTTGTGTTTGTTCAGGGTATACAGTTCACAAATTGACAATTATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTTTGTGTTTGTTCAGGGTATACAGTTCACAAATTGACAATTATTT  689

seq1  TAAATTTTTCTGGAAACAGCTTGAATTTTACAGAGTACTTTCCACAAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTTTCTGGAAACAGCTTGAATTTTACAGAGTACTTTCCACAAAAG  739

seq1  TCTCTTGCTTCATGTCTTTATAGTTATTTTCCCTGGAAAGGAAGGCTTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTGCTTCATGTCTTTATAGTTATTTTCCCTGGAAAGGAAGGCTTCC  789

seq1  TTTCCTCGTAATACAGGATAACTCCTAAGGTCTACATATCAATAGTGTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCGTAATACAGGATAACTCCTAAGGTCTACATATCAATAGTGTGG  839

seq1  TCACCACACCCTACAACTTCAGAGAGTTCTGCAGCACAATACAGGAGGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCACACCCTACAACTTCAGAGAGTTCTGCAGCACAATACAGGAGGCT  889

seq1  CCAATTGAAAGTTGCTAGCTTCTGAACCCAGATATTTTTTTTGCACAATC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTGAAAGTTGCTAGCTTCTGAACCCAGATATTTTTTTTGCACAATC  939

seq1  TGTAATCAATAAATTTTTATATTTCTTTGACTTCCACTAAAATATTTCTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATCAATAAATTTTTATATTTCTTTGACTTCCACTAAAATATTTCTG  989

seq1  AGCTTTAGACCCTTGTGGACAATTTATTTTGGTGACAATATTGGACGACA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTAGACCCTTGTGGACAATTTATTTTGGTGACAATATTGGACGACA  1039

seq1  CATACCATTTGCTTAAACAGCCTATGGAATTC  1082
      ||||||||||||||||||||||||||||||||
seq2  CATACCATTTGCTTAAACAGCCTATGGAATTC  1071