BAC Information

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BAC

Clone NameB6Ng01-054H03
Chromosome2 (Build37)15 (Build37)
Map Location 142,776,983 - 142,777,69882,613,668 - 82,614,200
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-054H03.bB6Ng01-054H03.g
ACCDH877187DH877188
length1,028527
definitionDH877187|Mus musculus domesticus DNA, BAC clone: B6Ng01-054H03, 5' end.DH877188|Mus musculus domesticus DNA, BAC clone: B6Ng01-054H03, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(142,776,983 - 142,777,698)(82,613,668 - 82,614,200)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttctggctgtcttcttttaggtttgttgaaagattactttcttgctt
tttctaaggtgtggtttctgtccttttattgttttttttttcctgttatt
atcctttgaagggctggattcgtagaaagataatgtgtgaatttggtttt
gtcatggactactttggtttcttcatctatggtaattgaaagtttggctg
gttatagtagcctgggctggcatttgtgttctcttagtgtctgtataaca
tctgtccaggatcttctggctttcatagtctctggtgaaaagtctggtgt
aattctgataggcctgcctttatatgttacttgacctttttcccttattg
cttttaatattctatctttgtttagtgtatttgttgttctgattattatg
tgttgggaagaatttcttttctggtccagtctatttggagttctgtaggc
ttcttgtatgttcatgggcatctctttctttaggtttggaaagttttctt
ctataattttgttgaagatatttgctggccctttaagttgaaaatcttca
ttctcatctactcttattatccgttgttttggtcgtctcattgtgtcctg
gatttcctggatgttttgagttaggatctttttgcattttgcattttctt
tgattgttgtcctgatgttctctatgtaatcttctgcacctgaaattctc
tcttccatctctgtattctgtgctgatgctcgcatctatggttcagattt
cttcctagggttctatctcagcgtgcct
atttacctgatgtaggaaaaatccagcctgagtcggcccatcccccactg
gggccagcacccagcctgcaccactgcttctctttgataatatcatgtat
gacacaaacagagatgagaggccgaatgtgttgtcccagcactgacacac
aggtttaatcatcaggcaccggaagttactctggaagtatcctggagcaa
atcaggaggaacccagcatcttgagtctgtcagtgacctgagcaaatttt
cttgctaatctcacactgacatgatccatcatgtggtgtcccgcctccca
tgcaggtctcctttcaggccaacttgaggcttgagaaggtctcttgtctt
tcccctaaactatggtgccattgtagggaactactctaggcagggccaag
aggcatggacaggaagacggagcagacatggggtgggaggttggggggag
agttcaggccagcaataagcatggagtcacccacagcctcattaactcaa
aggtggtcagtgctgggatggcatggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776983_142777698
seq2: B6Ng01-054H03.b_43_298 (reverse)

seq1  GAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATGGG  50
                                                        
seq2  --------------------------------------------------  0

seq1  ACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAG  100
                                                        
seq2  --------------------------------------------------  0

seq1  ACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATC  150
                                                        
seq2  --------------------------------------------------  0

seq1  AGATAGGGGACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGACT  200
                                                        
seq2  --------------------------------------------------  0

seq1  TCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCACAAAACCATCCA  250
                                                        
seq2  --------------------------------------------------  0

seq1  GTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGT  300
                                                        
seq2  --------------------------------------------------  0

seq1  TATCATGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACTAAG  350
                                                        
seq2  --------------------------------------------------  0

seq1  GTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAA  400
                                                        
seq2  --------------------------------------------------  0

seq1  ACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGG  450
                                                        
seq2  --------------------------------------------------  0

seq1  AAAAATTCCTGAACAGAAGAGCAATGGCTTGTGCTGTAAGATCGAGAATT  500
                |||||||| |||||||||||||||||||||||||||||| 
seq2  ----------GAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATC  40

seq1  GACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACAC  90

seq1  TGTCTATAAGACAAAAAGACCACCAACAGACTGGGAAAGGATCTTTACCT  600
       ||| ||||||||||||||||||||||||| |||||||||||||||||||
seq2  CGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTACCT  140

seq1  ATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAAG  190

seq1  AAGGTGGACCTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGA  700
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGA  240

seq1  ACTGAACAAAGAATTC  716
      ||||||||||||||||
seq2  ACTGAACAAAGAATTC  256

seq1: chr15_82613668_82614200
seq2: B6Ng01-054H03.g_66_598 (reverse)

seq1  ACCATGCCATCCCAGCACTGACCACCTTTGAGTTACTGGGGCTGTGGGTG  50
      ||||||||||||||||||||||||||||||||||| || |||||||||||
seq2  ACCATGCCATCCCAGCACTGACCACCTTTGAGTTAATGAGGCTGTGGGTG  50

seq1  ACTCCATGCTTATTGCTGGCCTGAACTCTCCCCCCAACCTCCCACCCCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCATGCTTATTGCTGGCCTGAACTCTCCCCCCAACCTCCCACCCCAT  100

seq1  GTCTGCTCCGTCTTCCTGTCCATGCCTCTTGGCCCTGCCTAGAGTAGTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGCTCCGTCTTCCTGTCCATGCCTCTTGGCCCTGCCTAGAGTAGTTC  150

seq1  CCTACAATGGCACCATAGTTTAGGGGAAAGACAAGAGACCTTCTCAAGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACAATGGCACCATAGTTTAGGGGAAAGACAAGAGACCTTCTCAAGCC  200

seq1  TCAAGTTGGCCTGAAAGGAGACCTGCATGGGAGGCGGGACACCACATGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTTGGCCTGAAAGGAGACCTGCATGGGAGGCGGGACACCACATGAT  250

seq1  GGATCATGTCAGTGTGAGATTAGCAAGAAAATTTGCTCAGGTCACTGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCATGTCAGTGTGAGATTAGCAAGAAAATTTGCTCAGGTCACTGACA  300

seq1  GACTCAAGATGCTGGGTTCCTCCTGATTTGCTCCAGGATACTTCCAGAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCAAGATGCTGGGTTCCTCCTGATTTGCTCCAGGATACTTCCAGAGT  350

seq1  AACTTCCGGTGCCTGATGATTAAACCTGTGTGTCAGTGCTGGGACAACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCCGGTGCCTGATGATTAAACCTGTGTGTCAGTGCTGGGACAACAC  400

seq1  ATTCGGCCTCTCATCTCTGTTTGTGTCATACATGATATTATCAAAGAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCGGCCTCTCATCTCTGTTTGTGTCATACATGATATTATCAAAGAGAA  450

seq1  GCAGTGGTGCAGGCTGGGTGCTGGCCCCAGTGGGGGATGGGCCGACTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGGTGCAGGCTGGGTGCTGGCCCCAGTGGGGGATGGGCCGACTCAG  500

seq1  GCTGGATTTTTCCTACATCAGGTAAATGAATTC  533
      |||||||||||||||||||||||||||||||||
seq2  GCTGGATTTTTCCTACATCAGGTAAATGAATTC  533