BAC Information

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BAC

Clone NameB6Ng01-054H11
Chromosome2 (Build37)
Map Location 124,695,212 - 124,797,488
singlet/doubletdoublet
Overlap genenone
Upstream gene4930517E11Rik, LOC100043360, Sema6d, LOC100043367, LOC100043369
Downstream geneSlc24a5, Myef2, LOC100043375, Slc12a1, Dut, A530010F05Rik, LOC100043698, Fbn1, Cep152, Shc4, Eid1, 3110001I20Rik, Cops2, Galk2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-054H11.bB6Ng01-054H11.g
ACCDH877201DH877202
length1,039215
definitionDH877201|Mus musculus domesticus DNA, BAC clone: B6Ng01-054H11, 5' end.DH877202|Mus musculus domesticus DNA, BAC clone: B6Ng01-054H11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(124,695,212 - 124,696,254)(124,797,274 - 124,797,488)
sequence
gaattccttaaaatacaaggtaagctgtctctgccaacaccaagggatgc
ttatggttatttccattctggttggagaaacagaatggtttccatgtatt
tgactggtatgctcatgctcacaccatattgaatcgtgactttggggtaa
gaaaatgaagaccaagaaggaaatggcatgagttcaccagagaaatacgc
gggaatccagttcaaaagtgtccaagagaattctagtattccaggatggt
gaggtggaggtaggaagcattgcatcttacgcaagccagagcaatcagtt
gtggcaaatgatgtggagagattgagagatccaagtacagagaactgacc
actgaacttggcatctggaaacgccagttgtcttaacagagcagtttcac
tggtatattgaaagctgaaagaggcatgttcaactgaaaactttagacaa
attaaacttaacagaatttaatggagcagagagtggttctcaaattgggc
ttctttctgaagcagaagaggtggggagagccccccccccccgtgctttg
cccaggattgtgaatagagacagctggaatggttagctcagccgttgcct
ggtttgaacagggtctgattagtcagctacccatgactgacgggtgccct
gccactgtcaagggctgaggcacaactatttgttacaaaagtgtagtcgc
agcttgtttttaaattagtctaatactacaccatattgcagctcattaca
tagggggaaagtactggggcatccttagaccagttttaggctaacaggta
gaagagaggggcattagagcaagctaacagggattgaaatcaaacttctt
tgttggggctctaatgggcagagcatttgtaaagttagactgagggaatg
ggagagaagatgtttaaaggtagtgttggagtctgaaagactggataaaa
acatctttccttccagtacctacatgctaagtttctggagacataaggaa
caggcaggaaagtgtgaaaaatacatccattacttactg
aatggaggagtgtgtggtcgtctttaggttagctttttgtggtttgccat
atgcatgggtgtgaagcatcccctcgatgggatgcccaatgagcaatttg
aggagtctgagaaaggaagaaagtctcacgactttcgtgaaagtgaaaat
taagtgctctttttcttctgcttgaaagagattgtgtgtgtgtgtgtgtg
tgtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_124695212_124696254
seq2: B6Ng01-054H11.b_37_1075

seq1  GAATTCCTTAAAATACAAGGTAAGCTGTCTCTGCCAACACCAAGGGATGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTAAAATACAAGGTAAGCTGTCTCTGCCAACACCAAGGGATGC  50

seq1  TTATGGTTATTTCCATTCTGGTTGGAGAAACAGAATGGTTTCCATGTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGTTATTTCCATTCTGGTTGGAGAAACAGAATGGTTTCCATGTATT  100

seq1  TGACTGGTATGCTCATGCTCACACCATATTGAATCGTGACTTTGGGGTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGGTATGCTCATGCTCACACCATATTGAATCGTGACTTTGGGGTAA  150

seq1  GAAAATGAAGACCAAGAAGGAAATGGCATGAGTTCACCAGAGAAATACGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGAAGACCAAGAAGGAAATGGCATGAGTTCACCAGAGAAATACGC  200

seq1  GGGAATCCAGTTCAAAAGTGTCCAAGAGAATTCTAGTATTCCAGGATGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATCCAGTTCAAAAGTGTCCAAGAGAATTCTAGTATTCCAGGATGGT  250

seq1  GAGGTGGAGGTAGGAAGCATTGCATCTTACGCAAGCCAGAGCAATCAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGGAGGTAGGAAGCATTGCATCTTACGCAAGCCAGAGCAATCAGTT  300

seq1  GTGGCAAATGATGTGGAGAGATTGAGAGATCCAAGTACAGAGAACTGACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCAAATGATGTGGAGAGATTGAGAGATCCAAGTACAGAGAACTGACC  350

seq1  ACTGAACTTGGCATCTGGAAACGCCAGTTGTCTTAACAGAGCAGTTTCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAACTTGGCATCTGGAAACGCCAGTTGTCTTAACAGAGCAGTTTCAC  400

seq1  TGGTATATTGAAAGCTGAAAGAGGCATGTTCAACTGAAAACTTTAGACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATATTGAAAGCTGAAAGAGGCATGTTCAACTGAAAACTTTAGACAA  450

seq1  ATTAAACTTAACAGAATTTAATGGAGCAGAGAGTGGTTCTCAAATTGGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAACTTAACAGAATTTAATGGAGCAGAGAGTGGTTCTCAAATTGGGC  500

seq1  TTCTTTCTGAAGCAGAAGAGGTGGGGAGAGCCCCCCCCCCCCGTGCTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTGAAGCAGAAGAGGTGGGGAGAGCCCCCCCCCCCCGTGCTTTG  550

seq1  CCCAGGATTGTGAATAGAGACAGCTGGAATGGTTAGCTCAGCCGTTGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGATTGTGAATAGAGACAGCTGGAATGGTTAGCTCAGCCGTTGCCT  600

seq1  GGTTTGAACAGGGTCTGATTAGTCAGCTACCCATGACTGACGGGTGCCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGAACAGGGTCTGATTAGTCAGCTACCCATGACTGACGGGTGCCCT  650

seq1  GCCACTGTCAAGGGCTGAGGCACAACTATTTGTTACAAAAGTGTAGTCGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTGTCAAGGGCTGAGGCACAACTATTTGTTACAAAAGTGTAGTCGC  700

seq1  AGCTTGTTTTTAAATTAGTCTAATACTACACCATATTGCAGCTCATTACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGTTTTTAAATTAGTCTAATACTACACCATATTGCAGCTCATTACA  750

seq1  TAGGGGGAAAGTACTGGGGCATCCTTAGACCAGTTTTAGGCTAACAGGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGGGAAAGTACTGGGGCATCCTTAGACCAGTTTTAGGCTAACAGGTA  800

seq1  GAAGAGAGGGGCATTAGAGCAAGCTAACAGGGATTGAAATCAAACTTCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGAGGGGCATTAGAGCAAGCTAACAGGGATTGAAATCAAACTTCTT  850

seq1  TGTT-GGGCTCTAATGGGCAGAGCATTTGTAAAGTTAGACTGAGGGAATG  899
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGGGCTCTAATGGGCAGAGCATTTGTAAAGTTAGACTGAGGGAATG  900

seq1  GGAGAGAAGATGTTTAAAGGTAAGTGTTGGAGTCTGAAAGAACTGGATAA  949
      ||||||||||||||||||||| |||||||||||||||||| |||||||||
seq2  GGAGAGAAGATGTTTAAAGGT-AGTGTTGGAGTCTGAAAG-ACTGGATAA  948

seq1  AAACATCCTTTCCTTCCATGTACCTACATGCTAAGTTTCT-GAGACATAG  998
      |||||| ||||||||||| ||||||||||||||||||||| |||||||| 
seq2  AAACAT-CTTTCCTTCCA-GTACCTACATGCTAAGTTTCTGGAGACATAA  996

seq1  GAAACAGGCAGGGAAAGATGAAAATATTACATTCATTACTTACTG  1043
      | |||||||||| ||   |||||  | ||||| ||||||||||||
seq2  GGAACAGGCAGGAAAGTGTGAAA--AATACATCCATTACTTACTG  1039

seq1: chr2_124797274_124797488
seq2: B6Ng01-054H11.g_71_285 (reverse)

seq1  ACACACACACACACACACACACACACACACACAATCTCTTTCAAGCAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACAATCTCTTTCAAGCAGAA  50

seq1  GAAAAAGAGCACTTAATTTTCACTTTCACGAAAGTCGTGAGACTTTCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAGAGCACTTAATTTTCACTTTCACGAAAGTCGTGAGACTTTCTTC  100

seq1  CTTTCTCAGACTCCTCAAATTGCTCATTGGGCATCCCATCGAGGGGATGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCAGACTCCTCAAATTGCTCATTGGGCATCCCATCGAGGGGATGC  150

seq1  TTCACACCCATGCATATGGCAAACCACAAAAAGCTAACCTAAAGACGACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACACCCATGCATATGGCAAACCACAAAAAGCTAACCTAAAGACGACC  200

seq1  ACACACTCCTCCATT  215
      |||||||||||||||
seq2  ACACACTCCTCCATT  215