BAC Information

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BAC

Clone NameB6Ng01-055C12
Chromosome2 (Build37)8 (Build37)
Map Location 142,776,661 - 142,777,22274,282,771 - 74,283,895
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-055C12.bB6Ng01-055C12.g
ACCDH877696DH877697
length1,0271,106
definitionDH877696|Mus musculus domesticus DNA, BAC clone: B6Ng01-055C12, 5' end.DH877697|Mus musculus domesticus DNA, BAC clone: B6Ng01-055C12, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(142,776,661 - 142,777,222)(74,282,771 - 74,283,895)
sequence
ctaaggatttcaatgcactcctcttatatggagaggtcctcggaattgtt
tgttcaggtgtgagcccattttttaatggggttatttgattttctgaagt
ccaccttcttgagttctttatatatgttggatattagtcccctatctgat
ttaggagaggtaaagatcctttcccaatctgttggtggtctttttgtctt
attgactgtgtcttttgccttgcagaaactttggagtttcattaggtccc
atttgtcaattctcaatcttacagcacaagccattgctgttttattcagg
aatttttcccctgtgcccatgtcttcaaggcttttccccactttctcctc
tataagtttcagtgtctctggttttatgtgaagttccttgatccacttag
atttgaccttagtacaaggagataagtatggattgattcgcattcttcta
catgataacaaccagttgtgccagcaccatttgttgaaaatgctgtcttt
cttccactggatggttttagctcccttgtcgaagatcaagtgaccatagg
tgtgtgggttcatttatgggtcttcaattctattccattggtctacttgt
ctgtctccataccagtaccatgcagtttttatcacaattgctctgtagta
aagctttaggtcaggcatggtgattccaccagaggttcttttatccttga
gaagactttttgctatcctaggttttttgttattccagatgaatttgcaa
attgctccttctaattcgttgaagaattgagttggaattttgatggggat
tgcattgaatctgtagattgcttttggcaagatagccatttttacaatgt
tgatcctgccaatccatgagcatgggagatctttccatcttctgagatct
tctttagtttcttctcagggacttgaagtttttatcatacagatctttca
ctttccttagttagagtcacgccgagatatttatatatttgtgactgtga
gaaggtgtgtttccctaattctttctc
gaattcattagagcagaaggagaaagaaataagaaagtcagctataatag
aataattatgcacaccagggccaactgaaaagcagtcatgcacaaatgaa
tcagctgttgttcagggctatgtttaggggaaatgggaacaactgttttt
ttttttttttaaacaaagagttgccatgggttactaagatgtctctactt
cggcctactgcacgcaatccctgtcattgtatgctgttcccagcacacac
acgcatcctcacacacacataactgcatccacacacatgcactgtcacat
gcacacacagacacaaacacatacacatgcatcctcagacacacatgcat
gtgcccacacacatgcacatacacacgcaccctcagacacatgcgcacaa
acagacacatgcgcacaaacatataggtaaatactgaagagcaagtgaga
atcagggcgaagctcagtagcagagcagctgcccaggatgtgtgggcctt
gggcaccgtgctggcaaacgtgtgggcacagaagtggctcagtattgttg
cagaggacccacctgccagtgttctcgtgggccagctcacaattatctgt
agttccattgccaagtgttctgaccctctctttcagtcttcatggtcacc
gcactcgtgttcacaatcccatacatatctacatgcttatgcacgtagtt
aaaataaatttttagtgccaaaagtaccaaaccctagaaagaacagtcaa
atgtccccatgtctggacacagattggtcccttggggctagaaagaggaa
gcttggtcaccagctgagaagtaccagacaatgaggggctctatgggctt
ccagggaggtcaagtctgagccatgctctgcagacccagccaatttcaca
caaattacaaagatcatacaagatcccagctagccgaacagctcagagaa
ggtgctcgctgccacacctgatgctctgcattgctctcaagtcccacatg
aaagagaaactgctgctgagctgtctctgacttcagagttgtgactgtct
cccaagatataaataagcactaaaaaaagaagaacaatgaaccttgaaag
atggcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776661_142777222
seq2: B6Ng01-055C12.b_59_619 (reverse)

seq1  GGTACTGGTATAGAGACAGACAAGTAGACCAATGGAATAGAATTGAAGAC  50
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GGTACTGGTATGGAGACAGACAAGTAGACCAATGGAATAGAATTGAAGAC  50

seq1  CCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  100
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  100

seq1  TAAAACCATCCAGAGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  150
      ||||||||||||| ||||||||||||||||||||||||| ||||||||||
seq2  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAAATGGTGCTGGC  150

seq1  ACAACTGGTTGTTATCATGTAGAAGAATGGGAATCGATCCATACTTATCT  200
      ||||||||||||||||||||||||||||| ||||| ||||||||||||||
seq2  ACAACTGGTTGTTATCATGTAGAAGAATGCGAATCAATCCATACTTATCT  200

seq1  CCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  250

seq1  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  300
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGACA  300

seq1  TGGGCACAGGGGACAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTA  350
      ||||||||||||| ||||||||||| | ||||||||||||||||||||||
seq2  TGGGCACAGGGGAAAAATTCCTGAATAAAACAGCAATGGCTTGTGCTGTA  350

seq1  AGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  400
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  400

seq1  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  450
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GGCAAAAGACACAGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  450

seq1  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  500
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GGATCTTTACCTCTCCTAAATCAGATAGGGGACTAATATCCAACATATAT  500

seq1  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAA  550

seq1  ATGGGGCTCACA  562
      || |||||||||
seq2  AT-GGGCTCACA  561

seq1: chr8_74282771_74283895
seq2: B6Ng01-055C12.g_68_1173

seq1  GAATTCATTAGAGCAGAAGGAGAAAGAAATAAGAAAGTCAGCTATAATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTAGAGCAGAAGGAGAAAGAAATAAGAAAGTCAGCTATAATAG  50

seq1  AATAATTATGCACACCAGGGCCAACTGAAAAGCAGTCATGCACAAATGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTATGCACACCAGGGCCAACTGAAAAGCAGTCATGCACAAATGAA  100

seq1  TCAGCTGTTGTTCAGGGCTATGTTTAGGGGAAATGGGAACAACTGTTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTGTTGTTCAGGGCTATGTTTAGGGGAAATGGGAACAACTGTTTTT  150

seq1  TTTTTTTTTTAAACAAAGAGTTGCCATGGGTTACTAAGATGTCTCTACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTAAACAAAGAGTTGCCATGGGTTACTAAGATGTCTCTACTT  200

seq1  CGGCCTACTGCACGCAATCCCTGTCATTGTATGCTGTTCCCAGCACACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCCTACTGCACGCAATCCCTGTCATTGTATGCTGTTCCCAGCACACAC  250

seq1  ACGCATCCTCACACACACATAACTGCATCCACACACATGCACTGTCACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCATCCTCACACACACATAACTGCATCCACACACATGCACTGTCACAT  300

seq1  GCACACACAGACACAAACACATACACATGCATCCTCAGACACACATGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACACAGACACAAACACATACACATGCATCCTCAGACACACATGCAT  350

seq1  GTGCCCACACACATGCACATACACACGCACCCTCAGACACATGCGCACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCCACACACATGCACATACACACGCACCCTCAGACACATGCGCACAA  400

seq1  ACAGACACATGCGCACAAACATATAGGTAAATACTGAAGAGCAAGTGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACACATGCGCACAAACATATAGGTAAATACTGAAGAGCAAGTGAGA  450

seq1  ATCAGGGCGAAGCTCAGTAGCAGAGCAGCTGCCCAGGATGTGTGGGCCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGGCGAAGCTCAGTAGCAGAGCAGCTGCCCAGGATGTGTGGGCCTT  500

seq1  GGGCACCGTGCTGGCAAACGTGTGGGCACAGAAGTGGCTCAGTATTGTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCACCGTGCTGGCAAACGTGTGGGCACAGAAGTGGCTCAGTATTGTTG  550

seq1  CAGAGGACCCACCTGCCAGTGTTCTCGTGGGCCAGCTCACAATTATCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGACCCACCTGCCAGTGTTCTCGTGGGCCAGCTCACAATTATCTGT  600

seq1  AGTTCCATTGCCAAGTGTTCTGACCCTCTCTTTCAGTCTTCATGGTCACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCATTGCCAAGTGTTCTGACCCTCTCTTTCAGTCTTCATGGTCACC  650

seq1  GCACTCGTGTTCACAATCCCATACATATCTACATGCTTATGCACGTAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTCGTGTTCACAATCCCATACATATCTACATGCTTATGCACGTAGTT  700

seq1  AAAATAAATTTTTAGTGCCAAAAGTACCAAACCCTAGAAAGAACAGTCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAATTTTTAGTGCCAAAAGTACCAAACCCTAGAAAGAACAGTCAA  750

seq1  ATGTCCCCATGTCTGGACACAGATTGGTCCCTTGGGGCTAGAAAGAGGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCCCATGTCTGGACACAGATTGGTCCCTTGGGGCTAGAAAGAGGAA  800

seq1  GCTTGGTCACCAGCTGAGAAGTACCAGACAATGAGGGGCTCTATGGGCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGTCACCAGCTGAGAAGTACCAGACAATGAGGGGCTCTATGGGCTT  850

seq1  CCAGGGAGGTCAAGTCTGAGCCATGCTCTGCAGACCCAGCCAATTTCACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGAGGTCAAGTCTGAGCCATGCTCTGCAGACCCAGCCAATTTCACA  900

seq1  CAAATTACAAAGATCATACAAGATCCCAGCTAGCCGAACAGCTCAGGAGA  950
      ||||||||||||||||||||||||||||||||||||||||||||| ||| 
seq2  CAAATTACAAAGATCATACAAGATCCCAGCTAGCCGAACAGCTCA-GAG-  948

seq1  AAGGTGCTCGCTGCCACACCTGATGCTCTTGCATTTGCTCTCCAAGTCCC  1000
      |||||||||||||||||||||||||||| |||| ||||||| ||||| ||
seq2  AAGGTGCTCGCTGCCACACCTGATGCTC-TGCA-TTGCTCT-CAAGT-CC  994

seq1  CACATGATAGAAGGAAAACTGGCTGCTTGGAGCTGTCCTCTGACTTCCAG  1050
      |||||||   |||  ||||| ||||||  ||||||| ||||||||| |||
seq2  CACATGA---AAGAGAAACT-GCTGCT--GAGCTGT-CTCTGACTT-CAG  1036

seq1  AGTTTGTGACGTGTCTCCCAAGATATAAATTAAAGCCACTTAAAAATAGA  1100
      || ||||||| |||||||||||||||||||  ||| ||| |||||| |||
seq2  AG-TTGTGAC-TGTCTCCCAAGATATAAAT--AAG-CAC-TAAAAAAAGA  1080

seq1  AG-ACCATGACACTTGAAAGATGGCC  1125
      || || ||||  ||||||||||||||
seq2  AGAACAATGAACCTTGAAAGATGGCC  1106