BAC Information

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BAC

Clone NameB6Ng01-055G06
Chromosome2 (Build37)
Map Location 56,633,529 - 56,634,727
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC227920, Nr4a2, LOC100041900, LOC100042910, Gpd2, LOC271788
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-055G06.bB6Ng01-055G06.g
ACCDH877850DH877851
length1,0351,171
definitionDH877850|Mus musculus domesticus DNA, BAC clone: B6Ng01-055G06, 5' end.DH877851|Mus musculus domesticus DNA, BAC clone: B6Ng01-055G06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatctcagatggctgagaagcacctaaaaatgtt
caacatctttaatcatcagggaaattcaaatcaaaacatccctgaggttc
cacctcacaccagtcagaatggctaagatcaaaaactcaggtgacagcag
atgctggcgaggatgtggagaaagaggaacactccattgctggtgagatt
gcaaactggtacaaccactctggaaatcaatctgaaggttcctcagaaaa
ttggacatagtactactagaggatccagcaataccactcatagacatata
cccagaatatgctccaacttgtaataaggacacatacttcactatgttca
tagcagccttatttataatagccagacgctgtaaagaacccagatgttcc
tcaactgaggaatggatacagaaaacctggtacatttacacatggagtac
tactcagctattaaaaacagcgaatttatgaaattcttagacaaatggat
ggatctggaggatatcatcctgagtgaggtaacccaatcacagaagaaca
ctcactgattagtggattttagcccagaagctcagaatccttcttagaat
agggaacaaaatatccatggaaggagttatagagacaaagtgcttgctga
caggagcctgatatagctgtctccggagaggctctaccagtgcctgacaa
atacagaagtggatgctcacagtcattcattggacagagcacagggtccc
caatgaaggagctagagaaaggacccaaggagctgaaggggtttgtagcc
ccataggaggaacaacaatatgaactaactagtatccccacagctccctg
ggactaaacaccaaccaaagaaaatacatggtgggacttacgtctctagc
tgcatatgtaagagaagatggcctagtcagtcatcagtgggagagagccc
ttgatcctgtgaagttatatgcccagtatgagggaatgccagggccagaa
gtgggtatgtgtgggtttgtgagcagggatgggga

gaattctgcagaccacttataaagacttctgtaataataataataataat
atacattttaggcttccctgaaatgtagaatgagagctagtcaaacccag
catatataatataaaaccatgtaatttaaatatatacaatatatttcaat
aatagaatatatttcaacatattgaatataattctaatatattgagatat
atttaaataactcccaaactaataagtaggaatctgacctataggaacaa
attgtagctggcttcagtgcccatgtaacacagaatttgcctcaacagta
agaaccttagcaaatcaggtgcaaataaaaatccattacaaacctttcta
ggtgaaattgttaaataggtcccaagactgaaaacattctcctatacaca
gaaaatccttttgaatcccaattcaaattaatcttaattcacttcattct
atgtaaatcccaatctgaaatttcaatggtgtgatcatttcatttgagaa
gtttgttttgaaaattcattgtttctctcagcaataatggaattcttcct
caaaaaaataagttatattcagaggcagactaagggaaagtatatacctc
ctttctttaaaaatgtccatttttatatgtctaataataataaataaaaa
ttaaatataggacatctatatgaaatgttaacaagacatgttcctgacct
acatgtgtgtgtgtatgtgtgtatatatattaaatatatctcaatatatt
agaattatattcaatatgttgaaatacattctatatatatatgtaactca
ttgaaagagtagtttagtaggaacactagctcgggaatatataatacatt
gattaaaatgtttaaagttgatatttgaactttgtaacctgtcatccaat
atgattatgagttaattctcttggcaaaataccttacaactttggggaga
tttttctgacattgagcaactgaaaagaccatggtaaacaacatttctac
actttagatatgatgcaatgcatgttgctgacttttcctaagatgaaaga
aagcttagtctatagatgatctatctacaagaaagctcacaaaatattca
gttttttcaattatgttgtccaatatctatagagaaaaagaaagtatttt
cttttattctcttgataaata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_56633529_56634727
seq2: B6Ng01-055G06.g_69_1239

seq1  GAATTCTGCAGACCACTTATAAAGACTTCTGTAATAATAATAATAATAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCAGACCACTTATAAAGACTTCTGTAATAATAATAATAATAAT  50

seq1  ATACATTTTAGGCTTCCCTGAAATGTAGAATGAGAGCTAGTCAAACCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATTTTAGGCTTCCCTGAAATGTAGAATGAGAGCTAGTCAAACCCAG  100

seq1  CATATATAATATAAAACCATGTAATTTAAATATATACAATATATTTCAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATAATATAAAACCATGTAATTTAAATATATACAATATATTTCAAT  150

seq1  AATAGAATATATTTCAACATATTGAATATAATTCTAATATATTGAGATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAATATATTTCAACATATTGAATATAATTCTAATATATTGAGATAT  200

seq1  ATTTAAATAACTCCCAAACTAATAAGTAGGAATCTGACCTATAGGAACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAATAACTCCCAAACTAATAAGTAGGAATCTGACCTATAGGAACAA  250

seq1  ATTGTAGCTGGCTTCAGTGCCCATGTAACACAGAATTTGCCTCAACAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAGCTGGCTTCAGTGCCCATGTAACACAGAATTTGCCTCAACAGTA  300

seq1  AGAACCTTAGCAAATCAGGTGCAAATAAAAATCCATTACAAACCTTTCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCTTAGCAAATCAGGTGCAAATAAAAATCCATTACAAACCTTTCTA  350

seq1  GGTGAAATTGTTAAATAGGTCCCAAGACTGAAAACATTCTCCTATACACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAAATTGTTAAATAGGTCCCAAGACTGAAAACATTCTCCTATACACA  400

seq1  GAAAATCCTTTTGAATCCCAATTCAAATTAATCTTAATTCACTTCATTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATCCTTTTGAATCCCAATTCAAATTAATCTTAATTCACTTCATTCT  450

seq1  ATGTAAATCCCAATCTGAAATTTCAATGGTGTGATCATTTCATTTGAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAATCCCAATCTGAAATTTCAATGGTGTGATCATTTCATTTGAGAA  500

seq1  GTTTGTTTTGAAAATTCATTGTTTCTCTCAGCAATAATGGAATTCTTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTTGAAAATTCATTGTTTCTCTCAGCAATAATGGAATTCTTCCT  550

seq1  CAAAAAAATAAGTTATATTCAGAGGCAGACTAAGGGAAAGTATATACCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAAATAAGTTATATTCAGAGGCAGACTAAGGGAAAGTATATACCTC  600

seq1  CTTTCTTTAAAAATGTCCATTTTTATATGTCTAATAATAATAAATAAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTAAAAATGTCCATTTTTATATGTCTAATAATAATAAATAAAAA  650

seq1  TTAAATATAGGACATCTATATGAAATGTTAACAAGACATGTTCCTGACCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATATAGGACATCTATATGAAATGTTAACAAGACATGTTCCTGACCT  700

seq1  ACATGTGTGTGTGTATGTGTGTATATATATTAAATATATCTCAATATATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTGTGTGTGTATGTGTGTATATATATTAAATATATCTCAATATATT  750

seq1  AGAATTATATTCAATATGTTGAAATACATTCTATATATATATGTAACTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTATATTCAATATGTTGAAATACATTCTATATATATATGTAACTCA  800

seq1  TTGAAAGAGTAGTTTAGTAGGAACACTAGCTCGGGAATATATAATACATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAGAGTAGTTTAGTAGGAACACTAGCTCGGGAATATATAATACATT  850

seq1  GATTAAAATG-TTAAAGTTGATATTTGAACTTTGTAACCTGTCAATCCAA  899
      |||||||||| |||||||||||||||||||||||||||||||| ||||||
seq2  GATTAAAATGTTTAAAGTTGATATTTGAACTTTGTAACCTGTC-ATCCAA  899

seq1  TATGATTATGAGTTAATTCTCTTGGCAAAATACCTTACAACTTTGGGGAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATTATGAGTTAATTCTCTTGGCAAAATACCTTACAACTTTGGGGAG  949

seq1  ATTTTTCTTGACAATTGAGCAACTGAAAAGAACCATGGTATACAACATTT  999
      ||||||| |||| ||||||||||||||||| ||||||||| |||||| ||
seq2  ATTTTTC-TGAC-ATTGAGCAACTGAAAAG-ACCATGGTAAACAACA-TT  995

seq1  TCTACACTTTAGATATGATGGCAATGCATGTTGCTTGACCTTTTCCCTAA  1049
      ||||||||||||||||||| |||||||||||||| ||||  ||| |||||
seq2  TCTACACTTTAGATATGAT-GCAATGCATGTTGC-TGAC--TTTTCCTAA  1041

seq1  GATGAGAGATAGCTTTAGTCTATAGATGATCTATCCTTACAAAGAAAGCT  1099
      ||||| ||| ||| |||||||||||||||||||||  ||| |||||||||
seq2  GATGAAAGAAAGC-TTAGTCTATAGATGATCTATC--TAC-AAGAAAGCT  1087

seq1  CAAACAATATATTCAATTTTTTTCAATTTAGTGTTGTCAAATA-CTATAG  1148
      |  |||| |||||| | |||||||||||   ||||||| |||| ||||||
seq2  C--ACAAAATATTC-AGTTTTTTCAATT--ATGTTGTCCAATATCTATAG  1132

seq1  AAGAAGAAGAAAGGTATATTTCTTTATAATCTCTTGGTTATAATATAAAT  1198
       |||| |||||| |||| ||||||| || |||||||        ||||||
seq2  -AGAAAAAGAAA-GTAT-TTTCTTT-TATTCTCTTG--------ATAAAT  1170

seq1  A  1199
      |
seq2  A  1171


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