BAC Information

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BAC

Clone NameB6Ng01-055J22
Chromosome2 (Build37)
Map Location 112,140,144 - 112,321,565
singlet/doubletdoublet
Overlap geneSlc12a6, Tmem85, EG668839, 2410042D21Rik, 2900064A13Rik, Chrm5
Upstream geneOlfr1279, Olfr1280, Olfr1281, Olfr1282, Olfr1283, Olfr1284, LOC100043465, Olfr1285, Olfr1286, Olfr1287, Olfr1288, Olfr1289, Olfr1290, GA_x5J8B7W4T2P-95628-96096, Olfr1292-ps1, Olfr1293, Olfr1294, Olfr1295, LOC668822, Olfr1297, Olfr1298, Olfr1299, Olfr1300-ps1, Olfr1301, Olfr1302, Olfr1303, Olfr249-ps1, LOC668825, Olfr1305, Olfr1306, LOC668827, Olfr1307, Olfr1308, Olfr1309, LOC433463, Olfr1310, Olfr1311, Olfr1312, Olfr1313, Olfr1314, Olfr1315-ps1, Olfr1316, Olfr1317, Olfr1318, GA_x5J8B7W3P0G-705890-705633, LOC100043187, Agpat7, Nut, Nola3
Downstream geneAven, Ryr3, 4930563P21Rik, Fmn1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-055J22.bB6Ng01-055J22.g
ACCDH878013DH878014
length1,1031,054
definitionDH878013|Mus musculus domesticus DNA, BAC clone: B6Ng01-055J22, 5' end.DH878014|Mus musculus domesticus DNA, BAC clone: B6Ng01-055J22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(112,140,144 - 112,141,252)(112,320,506 - 112,321,565)
sequence
gaattccttagagatgctgggtttgttattgtttgttgttgttgttgttg
tatgcttggttttggcaggtaccaccacctccttgtaaagatgctattgt
tagcgtggatgagttacattggcccagactggatgtgatgaacctgcctt
attagtctaataaatctaatgttcacctaattttcatattggctgctaaa
attctgctttcatttttgagtttcacatagaatttttcagttgttttcct
atccctttttgtttctaaggttttcataatatgatctaaacccctcaaac
tgcccagacatgtgtcctgcttgttttttctctggttttgggacccttat
tgtttttaagggtttaaaaaatcctatctacagctgacactgtgcaggtt
tcatatgatggtagtaagaaaattcccctcgaatcaatcatttagggact
ctatttgtagtcatttcagctttatgaatcatcctcactttttatttatt
gttttttcttaggttgagccacagctttcatgactacttttaacaaaaga
tttgtcacaaagtgaaatatcagcttgtgtgctgtgaatactgtataaat
taaaaatagatacagtacaagtcataatcttgctaaatactgttgccagt
tgtaggctctaagaaaagattagtaagttctaaagagatatttaaagata
ttctaacacattgaaattatatttgataaagcaactcttagtttattgat
cgagtaatgtcaggatggcagtgagaaggtggaggagtcacatcctaaag
cctaaaaccacaggtagagatgatctgaatagccaataataacttaataa
acactttaaatgtttctttgtacttaaattaataaatatttatgaatctt
ccttatagaagcaataggaagtattaacacaggtacactagcttaatggc
tacacagaagcattttcttctgtgcagttgttcttggcatttcctaactt
ctcttttcctttatctttatctgctttgaattggatccatgacctgtgaa
ctgcctcttcgtcccatgttctgccatgctctctggaaggggatgagtcc
tct
gaattctcgaagaactaatacatttttaaaagaatagccctgataaaaat
gttactactgatggcctagcaatttctatggatgaagaatggtttcagtg
ggagaagcagggaatgagagagggcaatgagacaggaagacaaaattcat
ttgttatgtgtgtaaaaatgtcagaatttttcattgaaaaacatgtaatt
gaatttttatagtcaaagtccaaaattcattaggcagaagaattttgcaa
tgataaaaattatatacatatattactatactgttatccaatgcaatgat
gtgtacagatatatttctagaatgttatccaaaatgtattttgccttcta
ccttatacttaccttaagtatttcaacactatgaatagttttgataatta
atttcttcagtggggaaaaaggttcaacaattcagcatcttgttctacgt
gcacttcataattttgttagcaatgatgaaccctaaatgaaaaagaaaac
tatgcagaagtgtgtgtgatgagcggaactgacctgtttgtgtttcttcc
agatactggccaagaagaggggaggtagctccaaacagagagtagcgcca
aaccttggaccaaatctgagtgtaatttcttgagccaggatggaagggga
gtcttatcacaatgaaaccactgtcaacggcaccccagtaaatcaccagg
ctttggaacgccatggactgtgggaagtcattactattgcagctgtgacc
gctgtggtcagtctgatgaccattgtcggcaatgtcttggtcatgatctc
cttcaaagtcaacagtcagctcaagacagttaacaactattacctgctca
gcttggcctgtgcagacctcatcattggcatcttctccatgaacctctac
acgacctacatcctcatgggacgctgggttctcgggagtctggcctgtga
ctttggctgcactcgactttgtagccagcaacccttctgtcatgaacctt
ctgtgatagctttgatcgttacttttccatcacaagaccctgaaaaccga
gcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_112140144_112141252
seq2: B6Ng01-055J22.b_49_1151

seq1  GAATTCCTTAGAGATGCTGGGTTTGTTATTGTTTGTTGTTGTTGTTGTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTAGAGATGCTGGGTTTGTTATTGTTTGTTGTTGTTGTTGTTG  50

seq1  TATGCTTGGTTTTGGCAGGTACCACCACCTCCTTGTAAAGATGCTATTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTTGGTTTTGGCAGGTACCACCACCTCCTTGTAAAGATGCTATTGT  100

seq1  TAGCGTGGATGAGTTACATTGGCCCAGACTGGATGTGATGAACCTGCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCGTGGATGAGTTACATTGGCCCAGACTGGATGTGATGAACCTGCCTT  150

seq1  ATTAGTCTAATAAATCTAATGTTCACCTAATTTTCATATTGGCTGCTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTCTAATAAATCTAATGTTCACCTAATTTTCATATTGGCTGCTAAA  200

seq1  ATTCTGCTTTCATTTTTGAGTTTCACATAGAATTTTTCAGTTGTTTTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGCTTTCATTTTTGAGTTTCACATAGAATTTTTCAGTTGTTTTCCT  250

seq1  ATCCCTTTTTGTTTCTAAGGTTTTCATAATATGATCTAAACCCCTCAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTTTTTGTTTCTAAGGTTTTCATAATATGATCTAAACCCCTCAAAC  300

seq1  TGCCCAGACATGTGTCCTGCTTGTTTTTTCTCTGGTTTTGGGACCCTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCAGACATGTGTCCTGCTTGTTTTTTCTCTGGTTTTGGGACCCTTAT  350

seq1  TGTTTTTAAGGGTTTAAAAAATCCTATCTACAGCTGACACTGTGCAGGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTAAGGGTTTAAAAAATCCTATCTACAGCTGACACTGTGCAGGTT  400

seq1  TCATATGATGGTAGTAAGAAAATTCCCCTCGAATCAATCATTTAGGGACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATGATGGTAGTAAGAAAATTCCCCTCGAATCAATCATTTAGGGACT  450

seq1  CTATTTGTAGTCATTTCAGCTTTATGAATCATCCTCACTTTTTATTTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTGTAGTCATTTCAGCTTTATGAATCATCCTCACTTTTTATTTATT  500

seq1  GTTTTTTCTTAGGTTGAGCCACAGCTTTCATGACTACTTTTAACAAAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTCTTAGGTTGAGCCACAGCTTTCATGACTACTTTTAACAAAAGA  550

seq1  TTTGTCACAAAGTGAAATATCAGCTTGTGTGCTGTGAATACTGTATAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCACAAAGTGAAATATCAGCTTGTGTGCTGTGAATACTGTATAAAT  600

seq1  TAAAAATAGATACAGTACAAGTCATAATCTTGCTAAATACTGTTGCCAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATAGATACAGTACAAGTCATAATCTTGCTAAATACTGTTGCCAGT  650

seq1  TGTAGGCTCTAAGAAAAGATTAGTAAGTTCTAAAGAGATATTTAAAGATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGCTCTAAGAAAAGATTAGTAAGTTCTAAAGAGATATTTAAAGATA  700

seq1  TTCTAACACATTGAAATTATATTTGATAAAGCAACTCTTAGTTTATTGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAACACATTGAAATTATATTTGATAAAGCAACTCTTAGTTTATTGAT  750

seq1  CGAGTAATGTCAGGATGGCAGTGAGAAGGTGGAGGAGTCACATCCTAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGTAATGTCAGGATGGCAGTGAGAAGGTGGAGGAGTCACATCCTAAAG  800

seq1  CCTAAAACCACAGGTAGAGATGATCTGAATAGCCAATAATAACTTAATAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAAACCACAGGTAGAGATGATCTGAATAGCCAATAATAACTTAATAA  850

seq1  ACACTTTAAATGTTTCTTTGTACTTAAATTAATAAATATTTATGAATCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTTAAATGTTTCTTTGTACTTAAATTAATAAATATTTATGAATCTT  900

seq1  CCTTATAGAAGCAATAGGAAGTATTAACACAGGTACACTAGCTTAATGGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATAGAAGCAATAGGAAGTATTAACACAGGTACACTAGCTTAATGGC  950

seq1  TACACAGAAGCATTTTCTTCTGTGCAGTTGTTCTTGGCATTTTCCTAACT  1000
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TACACAGAAGCATTTTCTTCTGTGCAGTTGTTCTTGGCA-TTTCCTAACT  999

seq1  TCTCTCTTCCTTTATCTTTATCTGGCTTTGAATTGGATTCCATGACCTTG  1050
      ||||| ||||||||||||||||| ||||||||||||| ||||||||| ||
seq2  TCTCTTTTCCTTTATCTTTATCT-GCTTTGAATTGGA-TCCATGACC-TG  1046

seq1  TGAGCTGCCTCTTCGTCCCATGTTCTGCCATGCTCTCTGGATAGGGGATG  1100
      ||| ||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TGAACTGCCTCTTCGTCCCATGTTCTGCCATGCTCTCTGGA-AGGGGATG  1095

seq1  AAGTCCTCT  1109
       ||||||||
seq2  -AGTCCTCT  1103

seq1: chr2_112320506_112321565
seq2: B6Ng01-055J22.g_70_1123 (reverse)

seq1  TGGCTCGGTATGTCAGTGGTCTTGTGATGGAAAAGTAACGATCAAAGCTA  50
      ||||||||| | |||| |||||||||||||||||||||||||||||||| 
seq2  TGGCTCGGT-TTTCAG-GGTCTTGTGATGGAAAAGTAACGATCAAAGCT-  47

seq1  ATCACCAGAAGGTTCATGACAGAAGCGTTGCTGGCTACATAGTCGAGTGC  100
      |||| |||||||||||||||||||| ||||||||||||| ||||||||||
seq2  ATCA-CAGAAGGTTCATGACAGAAGGGTTGCTGGCTACAAAGTCGAGTGC  96

seq1  AAGCCAAAGGTCACAGGCCAGACTCCCGAGAACCCAGCGTCCCATGAGGA  150
       ||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  -AGCCAAA-GTCACAGGCCAGACTCCCGAGAACCCAGCGTCCCATGAGGA  144

seq1  TGTAGGTCGTGTAGAGGTTCATGGAGAAGATGCCAATGATGAGGTCTGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGTCGTGTAGAGGTTCATGGAGAAGATGCCAATGATGAGGTCTGCA  194

seq1  CAGGCCAAGCTGAGCAGGTAATAGTTGTTAACTGTCTTGAGCTGACTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCAAGCTGAGCAGGTAATAGTTGTTAACTGTCTTGAGCTGACTGTT  244

seq1  GACTTTGAAGGAGATCATGACCAAGACATTGCCGACAATGGTCATCAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTGAAGGAGATCATGACCAAGACATTGCCGACAATGGTCATCAGAC  294

seq1  TGACCACAGCGGTCACAGCTGCAATAGTAATGACTTCCCACAGTCCATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCACAGCGGTCACAGCTGCAATAGTAATGACTTCCCACAGTCCATGG  344

seq1  CGTTCCAAAGCCTGGTGATTTACTGGGGTGCCGTTGACAGTGGTTTCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTCCAAAGCCTGGTGATTTACTGGGGTGCCGTTGACAGTGGTTTCATT  394

seq1  GTGATAAGACTCCCCTTCCATCCTGGCTCAAGAAATTACACTCAGATTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATAAGACTCCCCTTCCATCCTGGCTCAAGAAATTACACTCAGATTTG  444

seq1  GTCCAAGGTTTGGCGCTACTCTCTGTTTGGAGCTACCTCCCCTCTTCTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAAGGTTTGGCGCTACTCTCTGTTTGGAGCTACCTCCCCTCTTCTTG  494

seq1  GCCAGTATCTGGAAGAAACACAAACAGGTCAGTTCCGCTCATCACACACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTATCTGGAAGAAACACAAACAGGTCAGTTCCGCTCATCACACACA  544

seq1  CTTCTGCATAGTTTTCTTTTTCATTTAGGGTTCATCATTGCTAACAAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGCATAGTTTTCTTTTTCATTTAGGGTTCATCATTGCTAACAAAAT  594

seq1  TATGAAGTGCACGTAGAACAAGATGCTGAATTGTTGAACCTTTTTCCCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAGTGCACGTAGAACAAGATGCTGAATTGTTGAACCTTTTTCCCCA  644

seq1  CTGAAGAAATTAATTATCAAAACTATTCATAGTGTTGAAATACTTAAGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGAAATTAATTATCAAAACTATTCATAGTGTTGAAATACTTAAGGT  694

seq1  AAGTATAAGGTAGAAGGCAAAATACATTTTGGATAACATTCTAGAAATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATAAGGTAGAAGGCAAAATACATTTTGGATAACATTCTAGAAATAT  744

seq1  ATCTGTACACATCATTGCATTGGATAACAGTATAGTAATATATGTATATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTACACATCATTGCATTGGATAACAGTATAGTAATATATGTATATA  794

seq1  ATTTTTATCATTGCAAAATTCTTCTGCCTAATGAATTTTGGACTTTGACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTATCATTGCAAAATTCTTCTGCCTAATGAATTTTGGACTTTGACT  844

seq1  ATAAAAATTCAATTACATGTTTTTCAATGAAAAATTCTGACATTTTTACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAATTCAATTACATGTTTTTCAATGAAAAATTCTGACATTTTTACA  894

seq1  CACATAACAAATGAATTTTGTCTTCCTGTCTCATTGCCCTCTCTCATTCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAACAAATGAATTTTGTCTTCCTGTCTCATTGCCCTCTCTCATTCC  944

seq1  CTGCTTCTCCCACTGAAACCATTCTTCATCCATAGAAATTGCTAGGCCAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCTCCCACTGAAACCATTCTTCATCCATAGAAATTGCTAGGCCAT  994

seq1  CAGTAGTAACATTTTTATCAGGGCTATTCTTTTAAAAATGTATTAGTTCT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGTAACATTTTTATCAGGGCTATTCTTTTAAAAATGTATTAGTTCT  1044

seq1  TCGAGAATTC  1060
      ||||||||||
seq2  TCGAGAATTC  1054