BAC Information

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BAC

Clone NameB6Ng01-056H02
Chromosome2 (Build37)
Map Location 111,997,223 - 111,998,027
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC623301, 4930430A15Rik, Olfr1275, Olfr1276, Olfr1277, Olfr1278, Olfr1279, Olfr1280, Olfr1281, Olfr1282, Olfr1283, Olfr1284, LOC100043465, Olfr1285, Olfr1286, Olfr1287, Olfr1288, Olfr1289, Olfr1290, GA_x5J8B7W4T2P-95628-96096, Olfr1292-ps1, Olfr1293, Olfr1294, Olfr1295, LOC668822, Olfr1297, Olfr1298, Olfr1299, Olfr1300-ps1, Olfr1301, Olfr1302, Olfr1303, Olfr249-ps1, LOC668825, Olfr1305, Olfr1306, LOC668827, Olfr1307, Olfr1308, Olfr1309, LOC433463, Olfr1310, Olfr1311, Olfr1312, Olfr1313, Olfr1314, Olfr1315-ps1, Olfr1316, Olfr1317, Olfr1318
Downstream geneGA_x5J8B7W3P0G-705890-705633, LOC100043187, Agpat7, Nut, Nola3, Slc12a6, Tmem85, EG668839, 2410042D21Rik, 2900064A13Rik, Chrm5, Aven, Ryr3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-056H02.b
ACCDH878597
length806
definitionDH878597|Mus musculus domesticus DNA, BAC clone: B6Ng01-056H02, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgaatttatccagcttaaaaaaatatttattttgtttatttct
gttgctgtacagataccgaacaattctcaaggcttgaactgaggttgctg
tgcagtttagaagcgctacctctgtctctgaggactagtgtcaaagagaa
gtttctaacatttgagataacaacacgtgttcagtgtgtgaggttccaga
agttgccatctcttccataaaagacacaacatctgatgtaaactatattt
taggatgaatttactgctttttaatatgttcagcattcaaaagttcttta
gcaaaatctaatcagatctgcagagaatacttgatgaggtacttcacagt
agcttttttattttattttattttattttattttattttattttatttta
tcttattttattttattttatttaatttttgagacagggtttctctgtgt
agccctggctgtcctggaactcactttgtagactaggctggcctcgaact
cagaaatctacctgcctctgccgcccaagtgctgggattaaaggcatgtg
tcaccatgcccggctcacagtagctttttaaaacactaagttgaagagac
ttttgaaactttttaagcactaaataaaaatatttaattaaaatatattc
agttaaactacagatacatatttaatttcttctcataccctcttatgtct
gacaactcttcactatcaaattaaaggcctcatcttcttttattattttt
cacatagacataaattttacacacacgtacagacatatatatctatatgt
ttatac
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_111997223_111998027
seq2: B6Ng01-056H02.b_39_844 (reverse)

seq1  GTATATACATATAGATATATATGTCTGTACGTGTGTGTAAAATTTATGTC  50
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAAACATATAGATATATATGTCTGTACGTGTGTGTAAAATTTATGTC  50

seq1  TATGTG-AAAATAATAAAAGAAGATGAGGCCTTTAATTTGATAGTGAAGA  99
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGAAAAATAATAAAAGAAGATGAGGCCTTTAATTTGATAGTGAAGA  100

seq1  GTTGTCAGACATAAGAGGGTATGAGAAGAAATTAAATATGTATCTGTAGT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTCAGACATAAGAGGGTATGAGAAGAAATTAAATATGTATCTGTAGT  150

seq1  TTAACTGAATATATTTTAATTAAATATTTTTATTTAGTGCTTAAAAAGTT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTGAATATATTTTAATTAAATATTTTTATTTAGTGCTTAAAAAGTT  200

seq1  TCAAAAGTCTCTTCAACTTAGTGTTTTAAAAAGCTACTGTGAGCCGGGCA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAGTCTCTTCAACTTAGTGTTTTAAAAAGCTACTGTGAGCCGGGCA  250

seq1  TGGTGACACATGCCTTTAATCCCAGCACTTGGGCGGCAGAGGCAGGTAGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGACACATGCCTTTAATCCCAGCACTTGGGCGGCAGAGGCAGGTAGA  300

seq1  TTTCTGAGTTCGAGGCCAGCCTAGTCTACAAAGTGAGTTCCAGGACAGCC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGAGTTCGAGGCCAGCCTAGTCTACAAAGTGAGTTCCAGGACAGCC  350

seq1  AGGGCTACACAGAGAAACCCTGTCTCAAAAATTAAATAAAATAAAATAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTACACAGAGAAACCCTGTCTCAAAAATTAAATAAAATAAAATAAA  400

seq1  ATAAGATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAA  450

seq1  AAAGCTACTGTGAAGTACCTCATCAAGTATTCTCTGCAGATCTGATTAGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTACTGTGAAGTACCTCATCAAGTATTCTCTGCAGATCTGATTAGA  500

seq1  TTTTGCTAAAGAACTTTTGAATGCTGAACATATTAAAAAGCAGTAAATTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTAAAGAACTTTTGAATGCTGAACATATTAAAAAGCAGTAAATTC  550

seq1  ATCCTAAAATATAGTTTACATCAGATGTTGTGTCTTTTATGGAAGAGATG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTAAAATATAGTTTACATCAGATGTTGTGTCTTTTATGGAAGAGATG  600

seq1  GCAACTTCTGGAACCTCACACACTGAACACGTGTTGTTATCTCAAATGTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTTCTGGAACCTCACACACTGAACACGTGTTGTTATCTCAAATGTT  650

seq1  AGAAACTTCTCTTTGACACTAGTCCTCAGAGACAGAGGTAGCGCTTCTAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACTTCTCTTTGACACTAGTCCTCAGAGACAGAGGTAGCGCTTCTAA  700

seq1  ACTGCACAGCAACCTCAGTTCAAGCCTTGAGAATTGTTCGGTATCTGTAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCACAGCAACCTCAGTTCAAGCCTTGAGAATTGTTCGGTATCTGTAC  750

seq1  AGCAACAGAAATAAACAAAATAAATATTTTTTTAAGCTGGATAAATTCAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACAGAAATAAACAAAATAAATATTTTTTTAAGCTGGATAAATTCAA  800

seq1  GAATTC  805
      ||||||
seq2  GAATTC  806