BAC Information

Click to search

BAC

Clone NameB6Ng01-057C19
Chromosome2 (Build37)
Map Location 87,121,582 - 87,122,023
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr1052, Olfr1053-ps1, Olfr1054, Olfr1055, Olfr1056, Olfr1057, GA_x5J8B7TRQ4E-1174-939, Olfr1058, Olfr1059-ps1, Olfr1515, Olfr1062, Olfr1063-ps1, Olfr1064-ps1, Olfr1065, Olfr1066, Olfr1069-ps1, Olfr1070-ps1, Olfr228, Olfr1073-ps1, Olfr1075-ps1, GA_x5J8B7W4CQV-104617-103730, Olfr1076, LOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805, Olfr1079, Olfr1080, Olfr1081-ps1, Olfr1082, GA_x5J8B7W4CQV-18360-18784, Olfr1083, Olfr1084, Olfr1085, Olfr1086, Olfr1087, Olfr1088-ps1, Olfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302, Olfr1093, Olfr141, Olfr1094, Olfr1095, Olfr1096-ps1, Olfr1097, Olfr1098, Olfr1099, Olfr1100, Olfr1101, Olfr1102, Olfr1103-ps1, Olfr1104, Olfr1105, Olfr1106, Olfr1107, GA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259, LOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115, Olfr1521-ps1, LOC100041923
Downstream geneOlfr1117-ps1, GA_x5J8B7TY7N2-4-429, LOC668424, Olfr1118, Olfr1119-ps1, Olfr1120, Olfr1121, Olfr1122, LOC668432, Olfr1123, Olfr1125, Olfr1126, Pramel7, Pramel6, LOC668439, Olfr1127-ps1, Olfr253-ps1, Olfr1128, LOC100042038, LOC668445, LOC668447, Olfr1129, Olfr1130, Olfr1131, Olfr1132, LOC100042076, Olfr1133, Olfr1134, Olfr1135, Olfr1136, Olfr1137, Olfr1138, GA_x5J8B7W3Y5M-1033291-1033773, Olfr1140, Olfr1141, Olfr152, Olfr1142-ps1, Olfr1143, GA_x5J8B7W3Y5M-1094074-1093275, Olfr1145, Olfr1146-ps1, Olfr1147-ps1, Olfr1148, Olfr1149-ps1, Olfr1150-ps1, Olfr1151, Olfr1152, Olfr1153, Olfr1154, Olfr1155, Olfr1156, Olfr1157, Olfr74, Olfr1158, Olfr1159-ps1, Olfr1160, Olfr1161, Olfr73, Olfr1162, Olfr1163, Olfr1164, Olfr1165, Olfr1166, Olfr1167, Olfr1168, Olfr1169-ps1, Olfr1170, Olfr1171-ps1, Olfr1172-ps1, Olfr1173
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057C19.bB6Ng01-057C19.g
ACCDH879122DH879123
length1,052436
definitionDH879122|Mus musculus domesticus DNA, BAC clone: B6Ng01-057C19, 5' end.DH879123|Mus musculus domesticus DNA, BAC clone: B6Ng01-057C19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctttgtaattgggttacctcactcaggatgatgccctccaggtc
catccatttggctaggaatttcataaattcattctttttaatagctgagt
agtactccattgtgtaaatgtaccacattttctgtatccattcctctgtt
gagggtaatctgggttctttccatcttctggctattgtaaataaggctgc
tatgaacatagtggagcatgtgtccttctaaccggttggaatgtcttctg
gatgtattcccaggagaggtattgggggatcctctggtattactatgtcc
aattttctgagtaactgccagactgatttccagagtggttgtacaagctt
gcaatcccaccaacaatgtaggagtgttcctctttctccacatccttgcc
agcttctgctgtcacctgaatagttcatcttagccattctgactaatgtg
aggtggaatcttagtgttgttttgatttgcatttccctgatgattaagga
tgttgaacatttttttcaggtgcttctctgccattcggtattcctcaggt
gacaactctttgttcagctctgagctcctttttttaatggggttatttga
ttttctggagcctaacttcttgagttctttatatatattggaaattagtc
ccctatctgatttaggatagttaaagatcctttctcaatctgttggtggt
ctttttgtcttgttgacggtgtcttttgccttgcagaagctttgcaattt
tatgaggtcccatttgtcgattctcaatcttactgcacaagccagtgctg
ttctattcagaacttttccctgtaccatatcttcgaggcttttccctact
tctcctctacacttttcaggtctctggttttatgtggagttccttaatcc
acttagatttgaccttagtacagcagatagtatagatcaattacatcttt
ctacatgataacagtcagttgtgcagcccatttttaaaaagcggcttttt
tccacggaggtttactcccttgtcaaaacaaatgacaagggtgtgggtct
at
tacttctgaaaatggcttatgctcctctaaatatggaagacagagcgctc
agtgtgtagggcagaatacacggctcaatgtccttttagacaagatggct
tgactttgagtcaggagaatcataaaggaaacaatgtcatgccactacaa
tcctcaactgttacagattgaaatactgcatcaccttctactaagtaaaa
ctaagcaattaaatatcatttcactttttttttttttttaaagcatgagg
tagtttaatgacggagcttcgggccaacacatatctcccataggagacag
aggtgtcgaccacatggtgaagccataatggcggagctccggttcgaaac
atatctcacgcaggagacagtggtttcgaccccgaggcttggaagctagg
gttttttatagaaaaggtgtggggatgggggaggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_87121582_87122023
seq2: B6Ng01-057C19.g_67_508

seq1  GAATTCTACTTCTGAAAATGGCTTATGCTCCTCTAAATATGGAAGACAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACTTCTGAAAATGGCTTATGCTCCTCTAAATATGGAAGACAGA  50

seq1  GCGCTCAGTGTGTAGGGCAGAATACACGGCTCAATGTCCTTTTAGACAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCTCAGTGTGTAGGGCAGAATACACGGCTCAATGTCCTTTTAGACAAG  100

seq1  ATGGCTTGACTTTGAGTCAGGAGAATCATAAAGGAAACAATGTCATGCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTTGACTTTGAGTCAGGAGAATCATAAAGGAAACAATGTCATGCCA  150

seq1  CTACAATCCTCAACTGTTACAGATTGAAATACTGCATCACCTTCTACTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAATCCTCAACTGTTACAGATTGAAATACTGCATCACCTTCTACTAA  200

seq1  GTAAAACTAAGCAATTAAATATCATTTCACTTTTTTTTTTTTTTTAAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAACTAAGCAATTAAATATCATTTCACTTTTTTTTTTTTTTTAAAGC  250

seq1  ATGAGGTAGTTTAATGACGGAGCTTCGGGCCAACACATATCTCCCATAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGTAGTTTAATGACGGAGCTTCGGGCCAACACATATCTCCCATAGG  300

seq1  AGACAGAGGTGTCGACCACATGGTGAAGCCATAATGGCGGAGCTCCGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGAGGTGTCGACCACATGGTGAAGCCATAATGGCGGAGCTCCGGTT  350

seq1  CGAAACATATCTCACGCAGGAGACAGTGGTTTCGACCCCGAGGCTTGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAACATATCTCACGCAGGAGACAGTGGTTTCGACCCCGAGGCTTGGAA  400

seq1  GCTAGGGTTTTTTATAGAAAAGGTGTGGGGATGGGGGAGGAA  442
      ||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGGGTTTTTTATAGAAAAGGTGTGGGGATGGGGGAGGAA  442