BAC Information

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BAC

Clone NameB6Ng01-057C23
Chromosome2 (Build37)
Map Location 114,406,152 - 114,534,865
singlet/doubletdoublet
Overlap geneAtpbd4, LOC100043219
Upstream geneFmn1, Grem1, LOC100043520, Scg5, Arhgap11a, LOC100043526, Gja9, A530058N18Rik, Actc1, Aqr, Zfp770
Downstream geneLOC100043222, LOC100043232, LOC100043236, BC052040
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057C23.bB6Ng01-057C23.g
ACCDH879130DH879131
length1,1481,032
definitionDH879130|Mus musculus domesticus DNA, BAC clone: B6Ng01-057C23, 5' end.DH879131|Mus musculus domesticus DNA, BAC clone: B6Ng01-057C23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(114,406,152 - 114,407,323)(114,533,831 - 114,534,865)
sequence
gaattctcctaaagatgtgtagtgtttcattttccatctccccaaatatt
ttatctgcctagctatccaactgtctaaattggtgtgactacataggctt
tcttcaatttcacattctcacttcttatccagctatcttagggttcagca
aaaagaaaattagtgataatgctttcaatttaattagtatattacataca
ctgtaattattagcgggaaatgttatattaatgaatgtaaaagttagcag
taaattaccttgtagccattatcaatttcccaagctactgctccttaaga
taaccctctccctatggtccttccggtaatttctctttgcctgataaaca
tgatgattaaatagcacacagagtaaacctttgatactttttaaattaaa
tccatgcccagcctaagggctgtgtctgatttcaactaaatgtgtcagtt
aatcagataaaaaattatcagcaactcaaagaaacagcagccttaggctt
catcagagccagggaaggctgaacaaagtaagacattcagacaatatcac
attatgtgcaaaggttactgataaggctagaactaaactgagctgcctac
caatgaagcaatgtctgaaaagaatgttatgctcaacatctaaattacct
tttccatttttaagaaaatttgtaatgtcgagaaagactaagactattta
tccatatacatataaacatgtaaacagcacaggtatgtaaacaattcact
atagaacaggtttagagcaagggattcttaaaaagggtcttcacagtgag
atttccctgaaaagcacttcagaccactgtagcttacactaggcacactg
aagcctggtactctgtgggttgttggaaaggtccatgtgaatttagtcac
gaatctgcaaagctctacctagtaccacaaatgaaccacatataactcca
tcaggtttcttcatatcttagatagacaataactacagcaatactctagt
tattagatgtttatctgtacaatgagaatggatcatttgcagtttacaag
taaacaatgtacgctatccagtcagactgtttccataagagggttgaaag
cctactctattccatgtttcgaaaatccttaactttcgaaaatttaca
gaattccttttctgacttagtttctaaggtaaaaaggagtgtgctgtggt
caggaaacatgtggactgctctttgatatcttcaatacattttaagcttt
agtttccataatgtttagaatgagtactaccaaactgtgtgtatgtatct
gggcaggggtgaaggtgctagtggggattaaagataacactttttgtgat
cctgtaattatatgtagagaaaacttaactgtacatttaactctgtttag
tggcgagttctttagcctttgctttttccagcttggcaatgtgagccaca
gacttaggacccaggacattgcctctccagtggcatcaaatcacatcata
tctgttgtggtagtttgtcctaatagctttcaccagcttagctagagcac
ttttgtcttcctagttaacccttgtaaaagcaacagtggtgtatgtcttc
ctgtggaccaggctccccagtctggctttttacttgatggtgcagtatgg
gacccccatcttttgacacagggcaggcaggaaaacgaccagctcaatgg
ggtctacccacaggcaatcgctaccagctgagccttcttgttctccacca
aagtggtgactgtattgactcctggccagaggacagctggtctcttagtt
gggacatctcctttgccagcagctttcttctgagcaccaccactagtctt
tgcttctgctttgtccctggcctgtactcatgggcaagcataagtgggta
tgttgatatttgcctgtccagggcctgggtaaactagttagtggcaggag
gtactttgattccgtacagaggatggccctttgttgcagcagcctgatgt
accagggccatttggcgaagtgtgtgagacctcttttgggctggatgctc
tgcccaatgccgaatttcttgggtctttctcaaaggatcgaccaccttgg
catactgtttcttcaggacatcggggattggggcatcttctccctttgtc
ctcttccttgggaatcttgattggtaggagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_114406152_114407323
seq2: B6Ng01-057C23.b_47_1194

seq1  GAATTCTCCTAAAGATGTGTAGTGTTTCATTTTCCATCTCCCCAAATATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTAAAGATGTGTAGTGTTTCATTTTCCATCTCCCCAAATATT  50

seq1  TTATCTGCCTAGCTATCCAACTGTCTAAATTGGTGTGACTACATAGGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTGCCTAGCTATCCAACTGTCTAAATTGGTGTGACTACATAGGCTT  100

seq1  TCTTCAATTTCACATTCTCACTTCTTATCCAGCTATCTTAGGGTTCAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAATTTCACATTCTCACTTCTTATCCAGCTATCTTAGGGTTCAGCA  150

seq1  AAAAGAAAATTAGTGATAATGCTTTCAATTTAATTAGTATATTACATACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAATTAGTGATAATGCTTTCAATTTAATTAGTATATTACATACA  200

seq1  CTGTAATTATTAGCGGGAAATGTTATATTAATGAATGTAAAAGTTAGCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAATTATTAGCGGGAAATGTTATATTAATGAATGTAAAAGTTAGCAG  250

seq1  TAAATTACCTTGTAGCCATTATCAATTTCCCAAGCTACTGCTCCTTAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTACCTTGTAGCCATTATCAATTTCCCAAGCTACTGCTCCTTAAGA  300

seq1  TAACCCTCTCCCTATGGTCCTTCCGGTAATTTCTCTTTGCCTGATAAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCCTCTCCCTATGGTCCTTCCGGTAATTTCTCTTTGCCTGATAAACA  350

seq1  TGATGATTAAATAGCACACAGAGTAAACCTTTGATACTTTTTAAATTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGATTAAATAGCACACAGAGTAAACCTTTGATACTTTTTAAATTAAA  400

seq1  TCCATGCCCAGCCTAAGGGCTGTGTCTGATTTCAACTAAATGTGTCAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGCCCAGCCTAAGGGCTGTGTCTGATTTCAACTAAATGTGTCAGTT  450

seq1  AATCAGATAAAAAATTATCAGCAACTCAAAGAAACAGCAGCCTTAGGCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGATAAAAAATTATCAGCAACTCAAAGAAACAGCAGCCTTAGGCTT  500

seq1  CATCAGAGCCAGGGAAGGCTGAACAAAGTAAGACATTCAGACAATATCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGAGCCAGGGAAGGCTGAACAAAGTAAGACATTCAGACAATATCAC  550

seq1  ATTATGTGCAAAGGTTACTGATAAGGCTAGAACTAAACTGAGCTGCCTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGTGCAAAGGTTACTGATAAGGCTAGAACTAAACTGAGCTGCCTAC  600

seq1  CAATGAAGCAATGTCTGAAAAGAATGTTATGCTCAACATCTAAATTACCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAAGCAATGTCTGAAAAGAATGTTATGCTCAACATCTAAATTACCT  650

seq1  TTTCCATTTTTAAGAAAATTTGTAATGTCGAGAAAGACTAAGACTATTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATTTTTAAGAAAATTTGTAATGTCGAGAAAGACTAAGACTATTTA  700

seq1  TCCATATACATATAAACATGTAAACAGCACAGGTATGTAAACAATTCACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATATACATATAAACATGTAAACAGCACAGGTATGTAAACAATTCACT  750

seq1  ATAGAACAGGTTTAGAGCAAGGGATTCTTAAAAAGGGTCTTCACAGTGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAACAGGTTTAGAGCAAGGGATTCTTAAAAAGGGTCTTCACAGTGAG  800

seq1  ATTTCCCTGAAAAAGCACTTCAGACCACTGTAGCTTACACTAGGCACACT  850
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCCTG-AAAAGCACTTCAGACCACTGTAGCTTACACTAGGCACACT  849

seq1  GAAGCCTGGTACTCTGTGGTTTGTTGGAAAGGTCCATGTGAATTTAAGGT  900
      ||||||||||||||||||| ||||||||||||||||||||||||||  ||
seq2  GAAGCCTGGTACTCTGTGGGTTGTTGGAAAGGTCCATGTGAATTTA--GT  897

seq1  CACGAATCTGCAAAGCTCTACCTAGTACCACAAATGAACCACATATAACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGAATCTGCAAAGCTCTACCTAGTACCACAAATGAACCACATATAACT  947

seq1  CCATCAGTTTTCTTTCATATCTTAGATAGACAATAACTACAGCAATACTC  1000
      ||||||| |||| |||||||||||||||||||||||||||||||||||||
seq2  CCATCAGGTTTC-TTCATATCTTAGATAGACAATAACTACAGCAATACTC  996

seq1  TAAGTTAATTAAGATTGTTTTAATCTGTAACAATGAGAAATGAATCATTT  1050
      | |||||  | ||| |||||  |||||| |||||||| |||| |||||||
seq2  T-AGTTA--TTAGA-TGTTT--ATCTGT-ACAATGAG-AATGGATCATTT  1038

seq1  GCAGTATTACCAGTAAAACAATGTACGCTATCCAAGTCCAGACTGTTTTC  1100
      ||||| |||| ||| |||||||||||||||||| ||| |||||||||| |
seq2  GCAGT-TTACAAGT-AAACAATGTACGCTATCC-AGT-CAGACTGTTTCC  1084

seq1  ATAAGAGGGTTGAAAAGGCCCTACTCTAATTCCATGTTCTGAAAGATCCT  1150
      |||||||||||||||    |||||||| ||||||||||  |||| |||||
seq2  ATAAGAGGGTTGAAA---GCCTACTCT-ATTCCATGTTTCGAAA-ATCCT  1129

seq1  TAAACTTTCAGAAAATATTACA  1172
      | ||||||| |||||| |||||
seq2  T-AACTTTC-GAAAAT-TTACA  1148

seq1: chr2_114533831_114534865
seq2: B6Ng01-057C23.g_66_1097 (reverse)

seq1  TCCTCCATCCAATCAAGATTCCCAAAGGAAAGAAGGACAAAGGGAGAAGA  50
      ||||||  ||||||||||||||| ||||||   |||||||||||||||||
seq2  TCCTCCTACCAATCAAGATTCCC-AAGGAA--GAGGACAAAGGGAGAAGA  47

seq1  TGCCCC-ATCCCCGATGTCCTGAAGAAACAGTATGCCAAGGTGGTCGATC  99
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCAATCCCCGATGTCCTGAAGAAACAGTATGCCAAGGTGGTCGATC  97

seq1  CTTTGAGAAAAGACCCAAGAAATTCGGCATTGGGCAGAGCATCCAGCCCA  149
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAG-AAAGACCCAAGAAATTCGGCATTGGGCAGAGCATCCAGCCCA  146

seq1  AAAGAGGTCTCACACACTTCGCCAAATGGCCCTGGTACATCAGGCTGCTG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGGTCTCACACACTTCGCCAAATGGCCCTGGTACATCAGGCTGCTG  196

seq1  CAACAAAGGGCCATCCTCTGTACGGAATCAAAGTACCTCCTGCCACTAAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAAGGGCCATCCTCTGTACGGAATCAAAGTACCTCCTGCCACTAAC  246

seq1  TAGTTTACCCAGGCCCTGGACAGGCAAATATCAACATACCCACTTATGCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTACCCAGGCCCTGGACAGGCAAATATCAACATACCCACTTATGCT  296

seq1  TGCCCATGAGTACAGGCCAGGGACAAAGCAGAAGCAAAGACTAGTGGTGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCATGAGTACAGGCCAGGGACAAAGCAGAAGCAAAGACTAGTGGTGG  346

seq1  TGCTCAGAAGAAAGCTGCTGGCAAAGGAGATGTCCCAACTAAGAGACCAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAGAAGAAAGCTGCTGGCAAAGGAGATGTCCCAACTAAGAGACCAG  396

seq1  CTGTCCTCTGGCCAGGAGTCAATACAGTCACCACTTTGGTGGAGAACAAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCTCTGGCCAGGAGTCAATACAGTCACCACTTTGGTGGAGAACAAG  446

seq1  AAGGCTCAGCTGGTAGCGATTGCCTGTGGGTAGACCCCATTGAGCTGGTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTCAGCTGGTAGCGATTGCCTGTGGGTAGACCCCATTGAGCTGGTC  496

seq1  GTTTTCCTGCCTGCCCTGTGTCAAAAGATGGGGGTCCCATACTGCACCAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCCTGCCTGCCCTGTGTCAAAAGATGGGGGTCCCATACTGCACCAT  546

seq1  CAAGTAAAAAGCCAGACTGGGGAGCCTGGTCCACAGGAAGACATACACCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTAAAAAGCCAGACTGGGGAGCCTGGTCCACAGGAAGACATACACCA  596

seq1  CTGTTGCTTTTACAAGGGTTAACTAGGAAGACAAAAGTGCTCTAGCTAAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGCTTTTACAAGGGTTAACTAGGAAGACAAAAGTGCTCTAGCTAAG  646

seq1  CTGGTGAAAGCTATTAGGACAAACTACCACAACAGATATGATGTGATTTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGAAAGCTATTAGGACAAACTACCACAACAGATATGATGTGATTTG  696

seq1  ATGCCACTGGAGAGGCAATGTCCTGGGTCCTAAGTCTGTGGCTCACATTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCACTGGAGAGGCAATGTCCTGGGTCCTAAGTCTGTGGCTCACATTG  746

seq1  CCAAGCTGGAAAAAGCAAAGGCTAAAGAACTCGCCACTAAACAGAGTTAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCTGGAAAAAGCAAAGGCTAAAGAACTCGCCACTAAACAGAGTTAA  796

seq1  ATGTACAGTTAAGTTTTCTCTACATATAATTACAGGATCACAAAAAGTGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACAGTTAAGTTTTCTCTACATATAATTACAGGATCACAAAAAGTGT  846

seq1  TATCTTTAATCCCCACTAGCACCTTCACCCCTGCCCAGATACATACACAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTTAATCCCCACTAGCACCTTCACCCCTGCCCAGATACATACACAC  896

seq1  AGTTTGGTAGTACTCATTCTAAACATTATGGAAACTAAAGCTTAAAATGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGGTAGTACTCATTCTAAACATTATGGAAACTAAAGCTTAAAATGT  946

seq1  ATTGAAGATATCAAAGAGCAGTCCACATGTTTCCTGACCACAGCACACTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAGATATCAAAGAGCAGTCCACATGTTTCCTGACCACAGCACACTC  996

seq1  CTTTTTACCTTAGAAACTAAGTCAGAAAAGGAATTC  1035
      ||||||||||||||||||||||||||||||||||||
seq2  CTTTTTACCTTAGAAACTAAGTCAGAAAAGGAATTC  1032