BAC Information

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BAC

Clone NameB6Ng01-057C24
Chromosome2 (Build37)
Map Location 139,582,461 - 139,583,595
singlet/doubletsinglet
Overlap gene5430433G21Rik
Upstream geneLOC628103, C130053K05Rik, LOC100043792
Downstream geneTasp1, LOC672103, LOC269365, Esf1, 2310003L22Rik, Sel1l2, 2900006F19Rik, Flrt3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057C24.bB6Ng01-057C24.g
ACCDH879132DH879133
length1,1261,069
definitionDH879132|Mus musculus domesticus DNA, BAC clone: B6Ng01-057C24, 5' end.DH879133|Mus musculus domesticus DNA, BAC clone: B6Ng01-057C24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctttgctgttctgtgtttgaaaatgtctcatactatgaagtga
agtgttaggaaaatgtattataaacaatgttgccaagtcctggggagatg
agaatagctaccatgtctggcagtcatgggtacctgtggagtctctaatg
ctaatgtaggacactgtggacatccttccagaaagtttagtatgtactaa
gaggttttgttttgttttgttttttgttttacccccctcccatctttttc
agacatggacagctgtgagcgatggatgagctgcaaaagtgagttcttaa
agaaatacatgcacaaggtgatcaacgacctgcccagctgcccctgctcc
taccctactgaggtggcctacagcacagctgacatctttgaccgcatcaa
gcgcaaggacttccgatggaaggatgctagtgggcccaaagagaaactag
agatctacaagcctactgctcggtactgcatccgctctatgctgtccctg
gagagtaccacactggctgcccagcactgttgctatggtgacaacatgca
gctcatcaccaggggcaaaggggcaggcactcccaatctcatcagcaccg
agttctctgctgaactccactacaaagtggatgttctgccctggattatc
tgcaagggtgactggagcagatataatgaggcccggcctcccaataacgg
acagaagtgcacagagagcccttctgatgaggactacatcaaacagttcc
aagaagccagagagtactaaagcaccactggtttggagacacaaatgcac
tgcactgatctgccaactgtcacctggttctttttatccacaatatttgt
atatctgtatattccacatgaatatttttgtaagtataatagggtatgca
ccaggcctggaggaccgctatgtccagtactgacaaaccatgttggaagt
cctcctaatggctgtgtgggatggaagagcacctgggagccatagtgggt
atgactctgtttcccacctccatccagtgcaaaggagcatagagactgag
gttgtacatataaagcagtttatatatatttatattaatacttatataca
aattgtgactaagcttaactttttct
gaattctttgtttaactctgtaccccaattttaatggggttacttgaatt
tctggagtccagcttcttgagctgtttgtatatattggatcttagtcccc
tatcagatttaggattggtaaaaaccctttcccaatctgtgggcagcctt
tttgtcttattgacagtgtcttttgccttacagaagctttgcaattttat
gaggtcccatttgtcaattcttgatcttacagcacaagccattgctgttc
cccctgtgcccatatcttccaggctttcccccattttctcctctataaat
ttcagtgtctcttgttttatgtggagttctttgatccacttagacttgag
ctttgtacaaggagataagaatggatcaattcgcattcttctacatgata
accgccagttgtgctgaaagacccacaacatgaggactcccccactttct
gactcaggagaggcgacgccccaaaatcacccacaagaaatggtcatgct
gcaaattgcaagaggatttttattcaagagcgctctcgggcccacagtca
tacaccacgcaggggtagaggactgtggcgccccgagtagctgagtaagg
gggtatttaaaggaaaaaaccacaactcaaggaggtgggaagggcgttgt
tggaaaataccaaaaataccagttaagagtcacaaggaagtacaaagtca
cagggtgtcacaaggaatacctggtaattgttaactctcaagacagtttc
taaggagcccctaacaatagcacatttgcatagcgggttccggaaatggt
cagggtgactttctttgaatgaatactccttgaactcaggaagtgggtgg
gtggagaaatgtcactatctgttttatgattagcataccttggagcactg
agtttactactctttcagtgccagcaccatttgttgaaaatgctgtcttt
ttccactggatggttttagcctcccttgcaaagatcaagtgaccataggt
gtgtgggtttctttctggatcttcaattccacctcatagaattggcactg
tacagtaccgggcagttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_139582461_139583595
seq2: B6Ng01-057C24.b_38_1163

seq1  GAATTCTCTTTGCTGTTCTGTGTTTGAAAATGTCTCATACTATGAAGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTTGCTGTTCTGTGTTTGAAAATGTCTCATACTATGAAGTGA  50

seq1  AGTGTTAGGAAAATGTATTATAAACAATGTTGCCAAGTCCTGGGGAGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTAGGAAAATGTATTATAAACAATGTTGCCAAGTCCTGGGGAGATG  100

seq1  AGAATAGCTACCATGTCTGGCAGTCATGGGTACCTGTGGAGTCTCTAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAGCTACCATGTCTGGCAGTCATGGGTACCTGTGGAGTCTCTAATG  150

seq1  CTAATGTAGGACACTGTGGACATCCTTCCAGAAAGTTTAGTATGTACTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGTAGGACACTGTGGACATCCTTCCAGAAAGTTTAGTATGTACTAA  200

seq1  GAGGTTTTGTTTTGTTTTGTTTTTTGTTTTACCCCCCTCCCATCTTTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTTTGTTTTGTTTTGTTTTTTGTTTTACCCCCCTCCCATCTTTTTC  250

seq1  AGACATGGACAGCTGTGAGCGATGGATGAGCTGCAAAAGTGAGTTCTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATGGACAGCTGTGAGCGATGGATGAGCTGCAAAAGTGAGTTCTTAA  300

seq1  AGAAATACATGCACAAGGTGATCAACGACCTGCCCAGCTGCCCCTGCTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATACATGCACAAGGTGATCAACGACCTGCCCAGCTGCCCCTGCTCC  350

seq1  TACCCTACTGAGGTGGCCTACAGCACAGCTGACATCTTTGACCGCATCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCTACTGAGGTGGCCTACAGCACAGCTGACATCTTTGACCGCATCAA  400

seq1  GCGCAAGGACTTCCGATGGAAGGATGCTAGTGGGCCCAAAGAGAAACTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCAAGGACTTCCGATGGAAGGATGCTAGTGGGCCCAAAGAGAAACTAG  450

seq1  AGATCTACAAGCCTACTGCTCGGTACTGCATCCGCTCTATGCTGTCCCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTACAAGCCTACTGCTCGGTACTGCATCCGCTCTATGCTGTCCCTG  500

seq1  GAGAGTACCACACTGGCTGCCCAGCACTGTTGCTATGGTGACAACATGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTACCACACTGGCTGCCCAGCACTGTTGCTATGGTGACAACATGCA  550

seq1  GCTCATCACCAGGGGCAAAGGGGCAGGCACTCCCAATCTCATCAGCACCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATCACCAGGGGCAAAGGGGCAGGCACTCCCAATCTCATCAGCACCG  600

seq1  AGTTCTCTGCTGAACTCCACTACAAAGTGGATGTTCTGCCCTGGATTATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTCTGCTGAACTCCACTACAAAGTGGATGTTCTGCCCTGGATTATC  650

seq1  TGCAAGGGTGACTGGAGCAGATATAATGAGGCCCGGCCTCCCAATAACGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGGGTGACTGGAGCAGATATAATGAGGCCCGGCCTCCCAATAACGG  700

seq1  ACAGAAGTGCACAGAGAGCCCTTCTGATGAGGACTACATCAAACAGTTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAGTGCACAGAGAGCCCTTCTGATGAGGACTACATCAAACAGTTCC  750

seq1  AAGAAGCCAGAGAGTACTAAAGCACCACTGGTTTGGAGACACAAATGCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGCCAGAGAGTACTAAAGCACCACTGGTTTGGAGACACAAATGCAC  800

seq1  TGCACTGATCTGCCAACTGTCACCTGGTTCTTTTTATCCACAATATTTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTGATCTGCCAACTGTCACCTGGTTCTTTTTATCCACAATATTTGT  850

seq1  ATATCTGTATATTCCACATGAATATTTTTGTAAGTATAATAGGGGTATGC  900
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ATATCTGTATATTCCACATGAATATTTTTGTAAGTATAATA-GGGTATGC  899

seq1  ACCAGGCCTGGAGGACCGCTATGTCCAGTACTGACAAACCATGTTGGAAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGCCTGGAGGACCGCTATGTCCAGTACTGACAAACCATGTTGGAAG  949

seq1  TCCTCCTAATGGCTGTGTGGGATGGAAGAGGCACCTGGGAGCCATAGTGG  1000
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TCCTCCTAATGGCTGTGTGGGATGGAAGA-GCACCTGGGAGCCATAGTGG  998

seq1  GTATGACTCTG-TTCCCACCTCCATCCAGTGCAGAGGAGCATAGAGACTG  1049
      ||||||||||| ||||||||||||||||||||| ||||||||||||||||
seq2  GTATGACTCTGTTTCCCACCTCCATCCAGTGCAAAGGAGCATAGAGACTG  1048

seq1  AGGTTGTAAACATTATAAGCAGTTTATATATATATAAATATATATAACTT  1099
      |||||||  ||||   ||||||||||||||||| || ||   ||  ||||
seq2  AGGTTGT--ACATATAAAGCAGTTTATATATATTTATAT---TAATACTT  1093

seq1  ATTTAATACAAA-TGTGACTTAAGCTTAACCTTTTCT  1135
      ||   ||||||| |||||| |||||||||| ||||||
seq2  AT---ATACAAATTGTGAC-TAAGCTTAACTTTTTCT  1126