BAC Information

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BAC

Clone NameB6Ng01-057L24
Chromosome2 (Build37)10 (Build37)
Map Location 142,776,199 - 142,776,837103,094,917 - 103,095,506
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057L24.bB6Ng01-057L24.g
ACCDH879526DH879527
length953590
definitionDH879526|Mus musculus domesticus DNA, BAC clone: B6Ng01-057L24, 5' end.DH879527|Mus musculus domesticus DNA, BAC clone: B6Ng01-057L24, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(142,776,199 - 142,776,837)(103,094,917 - 103,095,506)
sequence
gaattcactttcttctacttgataaccaccagttgtgccagcaccatttg
ttgaaaatgctgtcttttttccactggatggtttttgctcctttgtcgaa
gatcaagtgaccataggtgtgtgggttcatttctgggtcttctattccat
tggtctacttgtctgtcactataccagtaccatgcagtttttatcacaat
tgctctgtagtacagctttaggtcaggcatggtgattccaccagaggttc
ttttatccttgagaagagttttagctatcctaggttttttgttattctag
atgaatttgcagattgccctttctaattcgttgaagaattgagttggaat
tttgatggggattgcattgaatctgtagattgcttttggcaagatagcta
tttttactatattgatcctgccaatccatgagcatgggagatctttccat
cttctgagatcttctttaacttttttcttcagagacttgaagtttttatc
atacagatctttcacttccttagttagagtcatgtcaatgtattttataa
tatttgtgactatttagaagggtgttgtttccctaatttctctcgcagcc
tgtttatcctttgtctacagaaagaccattgacttgtttgagtaaaataa
ctgttttaatcgtaaatgcttatattctgtcgcttcaatttttatcagtt
ttccctagtaaataagatggaacatagttttcctattttcttatgtaaaa
ttgatttgataattcatttagtatatcagggaattgtgaggtagagaaaa
gatcaagagtaaaactgatataaagattctattatgtaagtagctcatga
attagttatattagaaaggcttcatcaccttatggtttaaaatttatgtt
tatatcataatacaaatattcagtagatacgagttgtttctatattattt
taa
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgaattctttatatgtgttggatattagtccc
ctatctgttttaggataggtaaagatcctttcccagtctgttggtggtct
ctttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttcttttttttttttttttttttttttttgtgtgtgcaaatattat
attatacaagccattcctcttattctccgggcagatttaggtagtaagtt
cttgagtgtgacttgatgtgagtattttttagtgaatttattctgtaatc
ctaggaatgagtggcagataatgtgggatgtttttttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776199_142776837
seq2: B6Ng01-057L24.b_58_691 (reverse)

seq1  ACTCAAACAAGTCAATGGCCTTTCTCTATACAAAGAATAAACAGGCTGAG  50
      |||||||||||||||||| |||||| || |||||| |||||||||||| |
seq2  ACTCAAACAAGTCAATGGTCTTTCTGTAGACAAAGGATAAACAGGCTGCG  50

seq1  AAAGAAATTAGGGAAACAACACCCTTCTCAATAGTCACAAATAATATAAA  100
      | |||||||||||||||||||||||||| |||||||||||||| ||||||
seq2  AGAGAAATTAGGGAAACAACACCCTTCTAAATAGTCACAAATATTATAAA  100

seq1  ATATCTCGGCGTGACTCTAACTAAGGAAGTGAAAGATCTGTATGATAAAA  150
      |||  | | | |||||||||||||||||||||||||||||||||||||||
seq2  ATACATTGACATGACTCTAACTAAGGAAGTGAAAGATCTGTATGATAAAA  150

seq1  ACTTCAAGTCTCTGAAGAAAGAAATTAAAGAAGATCTCAGAAGATGGAAG  200
      |||||||||||||||||||| || ||||||||||||||||||||||||| 
seq2  ACTTCAAGTCTCTGAAGAAAAAAGTTAAAGAAGATCTCAGAAGATGGAAA  200

seq1  GATCTCCCATGCTCATGGATTGGCAGGATCAACATTGTAAAAATGGCTAT  250
      |||||||||||||||||||||||||||||||| || |||||||| |||||
seq2  GATCTCCCATGCTCATGGATTGGCAGGATCAATATAGTAAAAATAGCTAT  250

seq1  CTTGCCAAAAGCAATCTACAGATTCAATGCAATCCCCATCAAAATTCCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCAAAAGCAATCTACAGATTCAATGCAATCCCCATCAAAATTCCAA  300

seq1  CTCAATTCTTCAACGAATTAGAAGGAGCAATTTGCAAATTCATCTGGAAT  350
      ||||||||||||||||||||||| | ||||| ||||||||||||| ||||
seq2  CTCAATTCTTCAACGAATTAGAAAGGGCAATCTGCAAATTCATCTAGAAT  350

seq1  AACAAAAAACCTAGGATAGCAAAAAGTCTTCTCAAGGATAAAAGAACCTC  400
      |||||||||||||||||||| |||| ||||||||||||||||||||||||
seq2  AACAAAAAACCTAGGATAGCTAAAACTCTTCTCAAGGATAAAAGAACCTC  400

seq1  TGGTGGAATCACCATGCCTGACCTAAAGCTTTACTACAGAGCAATTGTGA  450
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TGGTGGAATCACCATGCCTGACCTAAAGCTGTACTACAGAGCAATTGTGA  450

seq1  TAAAAACTGCATGGTACTGGTATAGAGACAGACAAGTAGACCAATGGAAT  500
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TAAAAACTGCATGGTACTGGTATAGTGACAGACAAGTAGACCAATGGAAT  500

seq1  AGAATTGAAGACCCAGAAATGAACCCACACACCTATGGTCACTTGATCTT  550
      |     ||||||||||||||||||||||||||||||||||||||||||||
seq2  A-----GAAGACCCAGAAATGAACCCACACACCTATGGTCACTTGATCTT  545

seq1  CGACAAGGGAGCTAAAACCATCCAGAGGAAGAAAGACAGCATTTTCAACA  600
      |||||| ||||| |||||||||||| |||| |||||||||||||||||||
seq2  CGACAAAGGAGCAAAAACCATCCAGTGGAAAAAAGACAGCATTTTCAACA  595

seq1  ATTGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAA  639
      | ||||||||||||||||||| ||||||| |||||||||
seq2  AATGGTGCTGGCACAACTGGTGGTTATCAAGTAGAAGAA  634

seq1: chr10_103094917_103095506
seq2: B6Ng01-057L24.g_69_658

seq1  GAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATT  50

seq1  TTCTGAAGTCCACCTTCTTGAATTCTTTATATGTGTTGGATATTAGTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAGTCCACCTTCTTGAATTCTTTATATGTGTTGGATATTAGTCCC  100

seq1  CTATCTGTTTTAGGATAGGTAAAGATCCTTTCCCAGTCTGTTGGTGGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTGTTTTAGGATAGGTAAAGATCCTTTCCCAGTCTGTTGGTGGTCT  150

seq1  CTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCA  200

seq1  TTAGGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTT  250

seq1  CTGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCAC  300

seq1  TTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCTTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCTTTGA  350

seq1  TCCATTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCGATTCGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCGATTCGC  400

seq1  ATTCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTGTGCAAATATTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTGTGCAAATATTAT  450

seq1  ATTATACAAGCCATTCCTCTTATTCTCCGGGCAGATTTAGGTAGTAAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATACAAGCCATTCCTCTTATTCTCCGGGCAGATTTAGGTAGTAAGTT  500

seq1  CTTGAGTGTGACTTGATGTGAGTATTTTTTAGTGAATTTATTCTGTAATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGTGTGACTTGATGTGAGTATTTTTTAGTGAATTTATTCTGTAATC  550

seq1  CTAGGAATGAGTGGCAGATAATGTGGGATGTTTTTTTTTT  590
      ||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGAATGAGTGGCAGATAATGTGGGATGTTTTTTTTTT  590