BAC Information

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BAC

Clone NameB6Ng01-058G20
Chromosome2 (Build37)
Map Location 142,776,206 - 142,776,764
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-058G20.bB6Ng01-058G20.g
ACCDH880008DH880009
length1,2551,027
definitionDH880008|Mus musculus domesticus DNA, BAC clone: B6Ng01-058G20, 5' end.DH880009|Mus musculus domesticus DNA, BAC clone: B6Ng01-058G20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttaagggatttttgtgttttttctttaagggcttctacttgtt
tagcagtgttttcctgtaattctttaagggatttttgtgcttactgttta
aggccctctatctgtttagcagtgttctcctgtatttctttaagtgagtt
attaatttccttcttaaaatcctttaccaacatcatgagatatgatttta
aatctgaatcttgcttttcaggtgtgttggtgtatcccagacttgctgag
gtggaagttctgggttctgatgatggtgagcagtctttgtttctgttagt
aagattcgtatgtttgccttttgccatctgataatctcaggcattagttg
ttatagctgtctctggctggagcttgttcctcctgtgattctgttagcct
ctgtcaagcactcctgggagtccaactctctactgggtctcagtggtcag
agtactctctgcaggccacctctcctctgatgggggaggagcacagatgt
ctggagctcagaactgcatcctggctgaagatgatggcccaaaatggggc
ctgtccaagaagctatgttgcttcaatctgcagtctctctttcatagcca
ggtctctgaaggacccgggatacaggatggctctctcacctcatgactta
tttttaatattttgtgctctttgactatgctcaacttccaaagaatattt
tgtacgttttgaaacaatttagtattcaacattagatataggatcgtcaa
ttatggatagtattaaatattcattaatgatatttttaaggaatgaaagg
atatgaatataacattgaacaaacttttgtatattatttaattttcaaat
gctcaatattattaatgtttgttgtataaattgcatttaaataattaaat
taagaatattaattaattaattattatgtgatatctctgacttttaactg
ttctgaattctgaagctgacagctgtgcaatctaatacttctttgcttat
tctttcacaaaaaaacactgggttcatcatctttacacttatgcttcatt
ttactaataattcgagtttataaatggggagacatactcttactgttctg
tttaaaactaccttttatttttgttgcttagactgagactaatctgagtc
ctgtggaaactacttttaacgtttggtctctcaaatcggaacgaccttct
ttattccaatctgctggtgaccgacgaacgactgctcctgcttactaact
tcatc
gaattctttgttcagctctgagccccattttttaatggggttatttgatt
ttctggagttcaccttcttgagttctttatatatattggatattagtccc
ctatctgatttgggataagtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgacggtgtcttttgctttgcagaagctttgaaatttta
tgaggtcccatttattgattcttgatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctgtacccatatcttcgaggcttttccctac
tttctcctctataatttgcagtgtctctagttttatgtggagtttcttaa
tccacttagatttgacgttagtacaaggagatagaaatggatcaattcgc
attcttctacatgataactgccagttgtggcagcactatttgttgaaaat
gctgtcttttttccaatggatggttttagctcccttgtcaaagatcaagt
gaccataggtgtgtgggttcatctctgggtcttcaattctgttccattgg
tctacttttctgtcactataccagtaccatgcagttttgatcacaattgc
tctgtagtacagttttaggtctggcatggtgattccaccagaggttcttt
tacccttgagaagagtttttgctatcctcagttttttgttattccagatg
aatctgcagattgccctttctaattctttgaagaattgagttggaatttt
gatggggattgcattgaatttgtagattgcatttggcaagatagccattt
ttactatgttgatcctgccatccatgagcatgggagatcttttccatctt
ctgagatcttctttaattcttctttagagacttgaagttttatatacaga
tgtttcacttccttagttagagtcacgccaaggtaatttatatatttgtg
actattgaggagggtgttgtttccttaatttctttcttcagcttgttatc
cttttgtatacagaagccaatgacttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776206_142776764
seq2: B6Ng01-058G20.g_542_1094 (reverse)

seq1  CAAGTCAATGGCCTTTCTCTATAC-AAAGAATAAACAGGCTG-AGAAAGA  48
      ||||||| ||||  |||| ||||| |||| || |||| |||| |||||||
seq2  CAAGTCATTGGC--TTCTGTATACAAAAGGAT-AACAAGCTGAAGAAAGA  47

seq1  AATTAGGGAAACAACACCCTTCTCAATAGTCACAAATAATATAAAATATC  98
      ||||| |||||||||||||| |||||||||||||||| ||||||| || |
seq2  AATTAAGGAAACAACACCCTCCTCAATAGTCACAAAT-ATATAAATTACC  96

seq1  TCGGCGTGACTCTAACTAAGGAAGTGAAAGATCTGTATGATAAAAACTTC  148
      | ||||||||||||||||||||||||||| |||||||| || ||||||||
seq2  TTGGCGTGACTCTAACTAAGGAAGTGAAACATCTGTAT-AT-AAAACTTC  144

seq1  AAGTCTCTGAAGAAAGAAATTAAAGAAGATCTCAGAAGATGG-AAGGATC  197
      |||||||| |||||   ||||||||||||||||||||||||| || ||||
seq2  AAGTCTCTAAAGAA--GAATTAAAGAAGATCTCAGAAGATGGAAAAGATC  192

seq1  TCCCATGCTCATGGATTGGCAGGATCAACATTGTAAAAATGGCTATCTTG  247
      ||||||||||||||| ||||||||||||||| ||||||||||||||||||
seq2  TCCCATGCTCATGGA-TGGCAGGATCAACATAGTAAAAATGGCTATCTTG  241

seq1  CCAAAAGCAATCTACAGATTCAATGCAATCCCCATCAAAATTCCAACTCA  297
      ||||| |||||||||| |||||||||||||||||||||||||||||||||
seq2  CCAAATGCAATCTACAAATTCAATGCAATCCCCATCAAAATTCCAACTCA  291

seq1  ATTCTTCAACGAATTAGAAGGAGCAATTTGCAAATTCATCTGGAATAACA  347
      ||||||||| ||||||||| | ||||| |||| |||||||||||||||||
seq2  ATTCTTCAAAGAATTAGAAAGGGCAATCTGCAGATTCATCTGGAATAACA  341

seq1  AAAAACCTAGGATAGCAAAAAGTCTTCTCAAGGATAAAAGAACCTCTGGT  397
      ||||||  ||||||||||||| ||||||||||| ||||||||||||||||
seq2  AAAAACTGAGGATAGCAAAAACTCTTCTCAAGGGTAAAAGAACCTCTGGT  391

seq1  GGAATCACCATGCCTGACCTAAAGCTTTACTACAGAGCAATTGTGATAAA  447
      |||||||||||||| |||||||| || |||||||||||||||||||| ||
seq2  GGAATCACCATGCCAGACCTAAAACTGTACTACAGAGCAATTGTGATCAA  441

seq1  AACTGCATGGTACTGGTATAGAGACAGACAAGTAGACCAATGGAATAGAA  497
      ||||||||||||||||||||| |||||| |||||||||||||||| ||||
seq2  AACTGCATGGTACTGGTATAGTGACAGAAAAGTAGACCAATGGAACAGAA  491

seq1  TTGAAGACCCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGAC  547
      ||||||||||||| |||||||||||||||||||||||||||||||| |||
seq2  TTGAAGACCCAGAGATGAACCCACACACCTATGGTCACTTGATCTTTGAC  541

seq1  AAGGGAGCTAAA  559
      ||||||||||||
seq2  AAGGGAGCTAAA  553