BAC Information

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BAC

Clone NameB6Ng01-058G21
Chromosome2 (Build37)
Map Location 143,299,816 - 143,300,348
singlet/doubletsinglet
Overlap geneLOC668915
Upstream geneLOC668913, LOC668914, Kif16b, Snrpb2, Otor
Downstream geneLOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1, 4930517K23Rik, LOC627160, EG433481, Snx5, 8430406I07Rik, Ovol2, Ppia-ps2_1789.1, LOC635097, Csrp2bp, LOC100043552, 6330439K17Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-058G21.bB6Ng01-058G21.g
ACCDH880010DH880011
length1,160527
definitionDH880010|Mus musculus domesticus DNA, BAC clone: B6Ng01-058G21, 5' end.DH880011|Mus musculus domesticus DNA, BAC clone: B6Ng01-058G21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatactggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtgggcactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagataaagtttggagctgagatga
aaggatggaccacgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaca
cagaagtggatgctcacagtcagctaatggatggatcatagggctcccaa
tggaggagctagagaagtagccaagagctaaaggatctgcaaccctatag
tggaacaacattatgaactaaccagtacccggagctcttgacttctagct
gctattaatcaaaagatggctaatccggcttcctggaagagagcccattg
gactgcaacttaatatgccagtcagggaaccagggccaaaggggagtggt
ggcagggaat
tctgaattaactcactgttcaagttcttcttggtcctgttcacagagact
cttatccaatggtcaaagtgtgaacaaatggatttgtatattccatgaaa
aattttaatatgtggacaagtttgaagattgctatataacattgcttctc
cagtggtactgtatacacctgagagtgtgtattggtgaaatacagatggt
gttctctaagtctgctggattcccagttaaaagggcctagcaaacacaga
agtggatgctcacagtcagctaatggatggatcacagggctcccaatgga
ggagctagagaaagtacccaaggagctaaagggatctgcaaccctatagg
tggaacaacattatgaactaaccagtaccccggagctcttgactctagct
gcatatgtatcaaaagatggcctagtcggccatcactggaaagagaggcg
cattggacacgcaaactttatatgccccagtacaggggaacgccagggcc
aaaacgggggagtgggtgggtagggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_143299816_143300348
seq2: B6Ng01-058G21.g_68_600

seq1  GAATTCTCTGAATTAACTCACTGTTCAAGTTCTTCTTGGTCCTGTTCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGAATTAACTCACTGTTCAAGTTCTTCTTGGTCCTGTTCACA  50

seq1  GAGACTCTTATCCAATGGTCAAAGTGTGAACAAATGGATTTGTATATTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTCTTATCCAATGGTCAAAGTGTGAACAAATGGATTTGTATATTCC  100

seq1  ATGAAAAATTTTAATATGTGGACAAGTTTGAAGATTGCTATATAACATTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAAATTTTAATATGTGGACAAGTTTGAAGATTGCTATATAACATTG  150

seq1  CTTCTCCAGTGGTACTGTATACACCTGAGAGTGTGTATTGGTGAAATACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCCAGTGGTACTGTATACACCTGAGAGTGTGTATTGGTGAAATACA  200

seq1  GATGGTGTTCTCTAAGTCTGCTGGATTCCCAGTTAAAAGGGCCTAGCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTGTTCTCTAAGTCTGCTGGATTCCCAGTTAAAAGGGCCTAGCAAA  250

seq1  CACAGAAGTGGATGCTCACAGTCAGCTAATGGATGGATCACAGGGCTCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAAGTGGATGCTCACAGTCAGCTAATGGATGGATCACAGGGCTCCC  300

seq1  AATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCC  350

seq1  TATAGGTGGAACAACATTATGAACTAACCAGTACCCCGGAGCTCTTGACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGTGGAACAACATTATGAACTAACCAGTACCCCGGAGCTCTTGACT  400

seq1  CTAGCTGCATATGTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTGCATATGTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGA  450

seq1  GAGGCGCATTGGACACGCAAACTTTATATGCCCCAGTACAGGGGAACGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCGCATTGGACACGCAAACTTTATATGCCCCAGTACAGGGGAACGCC  500

seq1  AGGGCCAAAACGGGGGAGTGGGTGGGTAGGGGA  533
      |||||||||||||||||||||||||||||||||
seq2  AGGGCCAAAACGGGGGAGTGGGTGGGTAGGGGA  533