BAC Information

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BAC

Clone NameB6Ng01-058L07
Chromosome2 (Build37)
Map Location 144,131,370 - 144,227,987
singlet/doubletdoublet
Overlap geneOvol2, Ppia-ps2_1789.1, LOC635097, Csrp2bp
Upstream geneLOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1, 4930517K23Rik, LOC627160, EG433481, Snx5, 8430406I07Rik
Downstream geneLOC100043552, 6330439K17Rik, Polr3f, Rbbp9, Sec23b, Gm561, Dtd1, 1700010M22Rik, Slc24a3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-058L07.bB6Ng01-058L07.g
ACCDH880210DH880211
length1,0951,087
definitionDH880210|Mus musculus domesticus DNA, BAC clone: B6Ng01-058L07, 5' end.DH880211|Mus musculus domesticus DNA, BAC clone: B6Ng01-058L07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(144,131,370 - 144,132,477)(144,226,873 - 144,227,987)
sequence
gaattctcctgcagcggggacgtcagcttgttctgcataagggccgccaa
ctttttggaagtctttttgagaaatgtgctccctggatggtcactgttca
catgcagatacaggtcctcctgggtggggcccgtgtagccgcaatcctca
cacacgtagagtttgtcgcgacgctgcttgtaggcatactgctgctgtac
cccgtggatcttctttaggtgggactccaaggaacaccgctgggtgaagg
ccttgttacacacctcacatttgtaggggcggatgcctgcaaggacaagg
ggcagaaggtcaccagttcgtcagagccacgcccaagcttccctccggac
caagccataaaagtctcccttggctaagaactttgatgtggggagagtgg
gaccagaaccatgtaccagggttctggcagccagctgaacaaacctaaca
catgtgggcgccagtgagccagaacccaccacttggctctgggagagaga
ttaactttctttcatctaatttaatggtctcgtcttttatcagccaggtc
aagtgttttcaatttacgtactgacagtttcccgggaattcctctgagac
aaaaatcctagaataagttttttggaggggccgtcttagggaagcaaggg
ttagggaacgaaggacagaaacggggtagggaggaaggcagagagcaggg
aatactaccccagcctctgtgctggacatcgtgggaggcagcgcagagct
tacactgtgccaagcactgcagagacgaaatgaaatgaaggaccagggaa
aagggcttactttatatgccgaagaccagagttttctatgctgagtcccc
agccgggcaagaacatggtggctgccaggtcccaaacactccactggatt
aatgttaaactgtgacctttacaagtcttaattcacatagcatcgatgaa
ggaaagaaatctgaaacatttcccatttgctcagactgtgcttgtagcca
tgtaagtaattcatttacagtaacacacgcctttattccagcccttaagg
caggaggcaacagattctctgtggatttagcagcttgggctacac
gaattcactctgaacatagattaagccagacccctccggtacccaccagg
gactacatgaggtgaagtgagaaacacaaactgcacttagatatgttcag
aagtgcccgacacagggctgcttctctagcatgatcagaggacaaaggag
ggactgtccaagtctgctggccgcaggagatcatgaagagaaaaggctac
agcagttttgctaatgacctctcttcaagtttgcccagaaacccagtgct
aggcaaggtggatcaggctgctggcagagctcggactccactcactgctt
agatggcattcatttagaaaccgtcccaaagagaatggagctggggagag
ggctgagtaggtaaaatgcttgccatgcaagtgtgaggacttgaaccatg
taaaagccatgtaaaagcagggcacacagtgcatggggagcagacacgcc
atcagtctaggctgaaaagggaactccaggttgactgaaagactcttgca
tcaaaaaataaagtgtgactcaggtgtggcagcagatgtctttaatcaca
gcactcagggcagagaggcaggcagaactctgagttcagggccatcctga
tctacacactgagatctaggctagccaatgttacacagtgagaccctgtc
tcaaaattaattaaatttaataaaagaggttctgagtaataatgcaagat
atccaaagttaccacagttctccactgtgagtggagagtgcacctgcatg
catgtgtgcgtgtacacacacacacacacacacacacacacacacacaaa
cataccataaagaaaaaaacctcagagaacagaatctgccccagtgctca
gttcagatgttcgctcaactaagacaatttcctttttgcttttcagttca
cagactattaaatatattaaatattgtggcatctagactaaacattgatt
agatagtgaacagacccagtgtggtgcacgtatatttatccagctctcgg
gaggcagagagcgagtctgggtgtcagcgcatgtctccatagtgagttca
gacagcaaggctgtgtacagatctgaaaaaccctgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_144131370_144132477
seq2: B6Ng01-058L07.b_44_1138

seq1  GAATTCTCCTGCAGCGGGGACGTCAGCTTGTTCTGCATAAGGGCCGCCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTGCAGCGGGGACGTCAGCTTGTTCTGCATAAGGGCCGCCAA  50

seq1  CTTTTTGGAAGTCTTTTTGAGAAATGTGCTCCCTGGATGGTCACTGTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTGGAAGTCTTTTTGAGAAATGTGCTCCCTGGATGGTCACTGTTCA  100

seq1  CATGCAGATACAGGTCCTCCTGGGTGGGGCCCGTGTAGCCGCAATCCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAGATACAGGTCCTCCTGGGTGGGGCCCGTGTAGCCGCAATCCTCA  150

seq1  CACACGTAGAGTTTGTCGCGACGCTGCTTGTAGGCATACTGCTGCTGTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACGTAGAGTTTGTCGCGACGCTGCTTGTAGGCATACTGCTGCTGTAC  200

seq1  CCCGTGGATCTTCTTTAGGTGGGACTCCAAGGAACACCGCTGGGTGAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGTGGATCTTCTTTAGGTGGGACTCCAAGGAACACCGCTGGGTGAAGG  250

seq1  CCTTGTTACACACCTCACATTTGTAGGGGCGGATGCCTGCAAGGACAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTTACACACCTCACATTTGTAGGGGCGGATGCCTGCAAGGACAAGG  300

seq1  GGCAGAAGGTCACCAGTTCGTCAGAGCCACGCCCAAGCTTCCCTCCGGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAAGGTCACCAGTTCGTCAGAGCCACGCCCAAGCTTCCCTCCGGAC  350

seq1  CAAGCCATAAAAGTCTCCCTTGGCTAAGAACTTTGATGTGGGGAGAGTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCATAAAAGTCTCCCTTGGCTAAGAACTTTGATGTGGGGAGAGTGG  400

seq1  GACCAGAACCATGTACCAGGGTTCTGGCAGCCAGCTGAACAAACCTAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGAACCATGTACCAGGGTTCTGGCAGCCAGCTGAACAAACCTAACA  450

seq1  CATGTGGGCGCCAGTGAGCCAGAACCCACCACTTGGCTCTGGGAGAGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGGGCGCCAGTGAGCCAGAACCCACCACTTGGCTCTGGGAGAGAGA  500

seq1  TTAACTTTCTTTCATCTAATTTAATGGTCTCGTCTTTTATCAGCCAGGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTTTCTTTCATCTAATTTAATGGTCTCGTCTTTTATCAGCCAGGTC  550

seq1  AAGTGTTTTCAATTTACGTACTGACAGTTTCCCGGGAATTCCTCTGAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTTTTCAATTTACGTACTGACAGTTTCCCGGGAATTCCTCTGAGAC  600

seq1  AAAAATCCTAGAATAAGTTTTTTGGAGGGGCCGTCTTAGGGAAGCAAGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCCTAGAATAAGTTTTTTGGAGGGGCCGTCTTAGGGAAGCAAGGG  650

seq1  TTAGGGAACGAAGGACAGAAACGGGGTAGGGAGGAAGGCAGAGAGCAGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGAACGAAGGACAGAAACGGGGTAGGGAGGAAGGCAGAGAGCAGGG  700

seq1  AATACTACCCCAGCCTCTGTGCTGGACATCGTGGGAGGCAGCGCAGAGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTACCCCAGCCTCTGTGCTGGACATCGTGGGAGGCAGCGCAGAGCT  750

seq1  TACACTGTGCCAAGCACTGCAGAGACGAAATGAAATGAAGGACCAGGGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTGTGCCAAGCACTGCAGAGACGAAATGAAATGAAGGACCAGGGAA  800

seq1  AAGGGCTTACTTTATATGCCGAAGACCAGAGTTTTCTATGCTGAGTCCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCTTACTTTATATGCCGAAGACCAGAGTTTTCTATGCTGAGTCCCC  850

seq1  AGCCGGGCAAGAACATGGTGGCTGCCAGGTCCCAAAACACTCCACTGGAT  900
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AGCCGGGCAAGAACATGGTGGCTGCCAGGTCCC-AAACACTCCACTGGAT  899

seq1  TAATGTTAAAACTGTGACCTTTACAAGTCTTAATTCAACAATAGCATCGA  950
      ||||||| |||||||||||||||||||||||||||||   ||||||||||
seq2  TAATGTT-AAACTGTGACCTTTACAAGTCTTAATTCA--CATAGCATCGA  946

seq1  TGAAGGGAAAGAAATCTGAAACATTTCCCATTTGCTCAGAACTGTGCTTG  1000
      |||| |||||||||||||||||||||||||||||||||| ||||||||||
seq2  TGAA-GGAAAGAAATCTGAAACATTTCCCATTTGCTCAG-ACTGTGCTTG  994

seq1  TAGCCATGTTAAGTAATTCATTTACAGTAACACACGCCTTTAATCCCAGC  1050
      |||||||| |||||||||||||||||||||||||||||||| || |||||
seq2  TAGCCATG-TAAGTAATTCATTTACAGTAACACACGCCTTT-ATTCCAGC  1042

seq1  ACTCAAAGGCAGAGAGGCAAACAGA-TCTCTGTGATTTTAAGGCCAGCCT  1099
       ||  ||||||| ||||| |||||| ||||||||  ||||    |||| |
seq2  CCT-TAAGGCAG-GAGGC-AACAGATTCTCTGTGGATTTA---GCAGCTT  1086

seq1  GGGCTACAC  1108
      |||||||||
seq2  GGGCTACAC  1095

seq1: chr2_144226873_144227987
seq2: B6Ng01-058L07.g_69_1155 (reverse)

seq1  CACAGGGTTTTTCTCCAGGATCTTGCTACACAGCCCTGGCTGTCCTGAAA  50
      |||||||||||||     |||||   ||||||| ||| ||||| ||| ||
seq2  CACAGGGTTTTTC----AGATCT--GTACACAG-CCTTGCTGT-CTG-AA  41

seq1  CTCACTATGGAGACATGGCCGGCCTTGACACACAGAACTCCGCCTTCCTC  100
      ||||||||||||||||     ||  |||||| ||| ||| |||    |||
seq2  CTCACTATGGAGACAT-----GCGCTGACACCCAG-ACT-CGC---TCTC  81

seq1  TGCCTCCCGAGAGCTGGGATTAAATATACGTGCCACCACACCTGGGTCTT  150
      |||||||||||||||||   |||||||||||| ||||||| ||||||| |
seq2  TGCCTCCCGAGAGCTGG--ATAAATATACGTG-CACCACA-CTGGGTC-T  126

seq1  GTTCACTATCTTAATCATTGTTTTAGTCTAGATGCCACAATTATTTAATA  200
      |||||||||| |||||| || ||||||||||||||||||| |||||||||
seq2  GTTCACTATC-TAATCAATG-TTTAGTCTAGATGCCACAA-TATTTAATA  173

seq1  TATTTAATAGTCTGTGAACTGAAAAGCAAAAAAGGAAATTGTCTTAGTTG  250
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TATTTAATAGTCTGTGAACTGAAAAGC-AAAAAGGAAATTGTCTTAGTTG  222

seq1  AGCGAACATCTGAACTGAGCACTGGGGCAGATTCTGTTCTCTGAGGTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGAACATCTGAACTGAGCACTGGGGCAGATTCTGTTCTCTGAGGTTTT  272

seq1  TTTCTTTATGGTATGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTATGGTATGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  322

seq1  GTACACGCACACATGCATGCAGGTGCACTCTCCACTCACAGTGGAGAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACACGCACACATGCATGCAGGTGCACTCTCCACTCACAGTGGAGAACT  372

seq1  GTGGTAACTTTGGATATCTTGCATTATTACTCAGAACCTCTTTTATTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTAACTTTGGATATCTTGCATTATTACTCAGAACCTCTTTTATTAAA  422

seq1  TTTAATTAATTTTGAGACAGGGTCTCACTGTGTAACATTGGCTAGCCTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTAATTTTGAGACAGGGTCTCACTGTGTAACATTGGCTAGCCTAG  472

seq1  ATCTCAGTGTGTAGATCAGGATGGCCCTGAACTCAGAGTTCTGCCTGCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAGTGTGTAGATCAGGATGGCCCTGAACTCAGAGTTCTGCCTGCCT  522

seq1  CTCTGCCCTGAGTGCTGTGATTAAAGACATCTGCTGCCACACCTGAGTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCCCTGAGTGCTGTGATTAAAGACATCTGCTGCCACACCTGAGTCA  572

seq1  CACTTTATTTTTTGATGCAAGAGTCTTTCAGTCAACCTGGAGTTCCCTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTATTTTTTGATGCAAGAGTCTTTCAGTCAACCTGGAGTTCCCTTT  622

seq1  TCAGCCTAGACTGATGGCGTGTCTGCTCCCCATGCACTGTGTGCCCTGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCTAGACTGATGGCGTGTCTGCTCCCCATGCACTGTGTGCCCTGCT  672

seq1  TTTACATGGCTTTTACATGGTTCAAGTCCTCACACTTGCATGGCAAGCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACATGGCTTTTACATGGTTCAAGTCCTCACACTTGCATGGCAAGCAT  722

seq1  TTTACCTACTCAGCCCTCTCCCCAGCTCCATTCTCTTTGGGACGGTTTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCTACTCAGCCCTCTCCCCAGCTCCATTCTCTTTGGGACGGTTTCT  772

seq1  AAATGAATGCCATCTAAGCAGTGAGTGGAGTCCGAGCTCTGCCAGCAGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAATGCCATCTAAGCAGTGAGTGGAGTCCGAGCTCTGCCAGCAGCC  822

seq1  TGATCCACCTTGCCTAGCACTGGGTTTCTGGGCAAACTTGAAGAGAGGTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCACCTTGCCTAGCACTGGGTTTCTGGGCAAACTTGAAGAGAGGTC  872

seq1  ATTAGCAAAACTGCTGTAGCCTTTTCTCTTCATGATCTCCTGCGGCCAGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCAAAACTGCTGTAGCCTTTTCTCTTCATGATCTCCTGCGGCCAGC  922

seq1  AGACTTGGACAGTCCCTCCTTTGTCCTCTGATCATGCTAGAGAAGCAGCC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTGGACAGTCCCTCCTTTGTCCTCTGATCATGCTAGAGAAGCAGCC  972

seq1  CTGTGTCGGGCACTTCTGAACATATCTAAGTGCAGTTTGTGTTTCTCACT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTCGGGCACTTCTGAACATATCTAAGTGCAGTTTGTGTTTCTCACT  1022

seq1  TCACCTCATGTAGTCCCTGGTGGGTACCGGAGGGGTCTGGCTTAATCTAT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTCATGTAGTCCCTGGTGGGTACCGGAGGGGTCTGGCTTAATCTAT  1072

seq1  GTTCAGAGTGAATTC  1115
      |||||||||||||||
seq2  GTTCAGAGTGAATTC  1087