BAC Information

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BAC

Clone NameB6Ng01-059B05
Chromosome2 (Build37)
Map Location 151,106,831 - 151,197,224
singlet/doubletdoublet
Overlap genenone
Upstream gene3300002I08Rik, LOC100043832, OTTMUSG00000015730, LOC668924, OTTMUSG00000015743, LOC545472, Cst7, 2310001A20Rik, Acss1, Vsx1, Entpd6, LOC100043605, Pygb, Abhd12, Gins1, LOC668925, 4930519N13Rik, LOC668926, Nanp, LOC433486, LOC381390, 4930442J19Rik
Downstream geneLOC100043839, LOC100043840, 4921509C19Rik, Nsfl1c, Fkbp1a, Sdcbp2, Snph, LOC668929, BC052486, 5430405G05Rik, Psmf1, Rspo4, Angpt4, 5430432M24Rik, 2310046K01Rik, Scrt2, Srxn1, Tcf15, LOC100043843, Csnk2a1, Tbc1d20, Rbck1, Trib3, LOC628060, Nrsn2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-059B05.bB6Ng01-059B05.g
ACCDH880472DH880473
length932445
definitionDH880472|Mus musculus domesticus DNA, BAC clone: B6Ng01-059B05, 5' end.DH880473|Mus musculus domesticus DNA, BAC clone: B6Ng01-059B05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(151,106,831 - 151,107,581)(151,196,774 - 151,197,224)
sequence
gaattcctttaaatacataaataaaatattcactagtaaaaatgtaaatt
gaatatgcactgtaaaaaaaactagagtgaaaacagggaatgtattgtca
tgtaagccaattactttataaatgtaattaagaaatggcagccatgggga
aaggtagccttttaaaatcaatgagttgtttttttttttttcaaaagtaa
ctacctatgcttactggttaagcaagaaaagatggataaccattgtctct
gtacagtaggcttagatttttcaaagcctactttatatgggttctgaaac
actttgacctcccttctagtccactatccatcagagctagtggaaaggaa
tggttaatagggaaaagtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggacctgagatga
aaggatggaccatgtagagactgccttatccagggatccaccacataatc
agcttccaaacgctgacaccattgcacacactagtaagattttgctgaaa
ggacccagatatagctgtcttttgtgagacaatgccagggcctagcaaac
acataagtggatgctcacagtcagctattggatggatcacagggacccca
atggaggagctagagaaagtacccaaggagctaaagggatctgcaaccct
ataggtggatcaacattatgaactaaccagtaccccggagctcttgactc
tagctgcatatgtatcaaaagatggcctagtcggccatcactggaaagag
aggcccattggacacacaaactttatatgccc
cctttgatatttccatgtgtgaatgttgactgtgaccatattcattccct
ccacttctttcttatttttcttttccacgccctagaagattcctttcctc
ttaaaagcatcacttagaactttataatgtatttttgaaacttaaaaaat
ttattcatttgagtgctctgtctgcatgtatacctgctgccagaagaggg
catcagatccctcttattgatggtgatgaaccgccatgtgtttgctgaga
attgaactcaggacctctgccagaacagccagcgccatctcaccagccaa
aaccagatttttaattaagtagtatttttaaaaattactacatatttctt
tgtgggtccacacagtcatataatcctttcaggcaagcattaagggtagg
ggtatgctagggcactgaggcaggagtgggtggatgggtggggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_151106831_151107581
seq2: B6Ng01-059B05.b_44_794

seq1  GAATTCCTTTAAATACATAAATAAAATATTCACTAGTAAAAATGTAAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTAAATACATAAATAAAATATTCACTAGTAAAAATGTAAATT  50

seq1  GAATATGCACTGTAAAAAAAACTAGAGTGAAAACAGGGAATGTATTGTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATGCACTGTAAAAAAAACTAGAGTGAAAACAGGGAATGTATTGTCA  100

seq1  TGTAAGCCAATTACTTTATAAATGTAATTAAGAAATGGCAGCCATGGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGCCAATTACTTTATAAATGTAATTAAGAAATGGCAGCCATGGGGA  150

seq1  AAGGTAGCCTTTTAAAATCAATGAGTTGTTTTTTTTTTTTTCAAAAGTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTAGCCTTTTAAAATCAATGAGTTGTTTTTTTTTTTTTCAAAAGTAA  200

seq1  CTACCTATGCTTACTGGTTAAGCAAGAAAAGATGGATAACCATTGTCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTATGCTTACTGGTTAAGCAAGAAAAGATGGATAACCATTGTCTCT  250

seq1  GTACAGTAGGCTTAGATTTTTCAAAGCCTACTTTATATGGGTTCTGAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGTAGGCTTAGATTTTTCAAAGCCTACTTTATATGGGTTCTGAAAC  300

seq1  ACTTTGACCTCCCTTCTAGTCCACTATCCATCAGAGCTAGTGGAAAGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGACCTCCCTTCTAGTCCACTATCCATCAGAGCTAGTGGAAAGGAA  350

seq1  TGGTTAATAGGGAAAAGTACTCACTGATAAGTGGATATTAGCCCAAAACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTAATAGGGAAAAGTACTCACTGATAAGTGGATATTAGCCCAAAACC  400

seq1  TAGGATACCCAAGATATAAGATACAATTTCCTAAACACATGAAACTCAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGATACCCAAGATATAAGATACAATTTCCTAAACACATGAAACTCAAG  450

seq1  AAAAATGAAGACTGAAGTGTGGACACTATGCCCCTCCTTAGAAGTGGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGAAGACTGAAGTGTGGACACTATGCCCCTCCTTAGAAGTGGGAA  500

seq1  CAAAACACCCTTGGAAGGAGTTACAGAGACAAAGTTTGGACCTGAGATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACACCCTTGGAAGGAGTTACAGAGACAAAGTTTGGACCTGAGATGA  550

seq1  AAGGATGGACCATGTAGAGACTGCCTTATCCAGGGATCCACCACATAATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATGGACCATGTAGAGACTGCCTTATCCAGGGATCCACCACATAATC  600

seq1  AGCTTCCAAACGCTGACACCATTGCACACACTAGTAAGATTTTGCTGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCCAAACGCTGACACCATTGCACACACTAGTAAGATTTTGCTGAAA  650

seq1  GGACCCAGATATAGCTGTCTTTTGTGAGACAATGCCAGGGCCTAGCAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCCAGATATAGCTGTCTTTTGTGAGACAATGCCAGGGCCTAGCAAAC  700

seq1  ACATAAGTGGATGCTCACAGTCAGCTATTGGATGGATCACAGGGACCCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAGTGGATGCTCACAGTCAGCTATTGGATGGATCACAGGGACCCCA  750

seq1  A  751
      |
seq2  A  751

seq1: chr2_151196774_151197224
seq2: B6Ng01-059B05.g_68_518 (reverse)

seq1  TCCCCCACCCATCCACCCACTCCTGCCTCAGTGCCCTAGCATACCCCTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCACCCATCCACCCACTCCTGCCTCAGTGCCCTAGCATACCCCTAC  50

seq1  CCTTAATGCTTGCCTGAAAGGATTATATGACTGTGTGGACCCACAAAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAATGCTTGCCTGAAAGGATTATATGACTGTGTGGACCCACAAAGAA  100

seq1  ATATGTAGTAATTTTTAAAAATACTACTTAATTAAAAATCTGGTTTTGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTAGTAATTTTTAAAAATACTACTTAATTAAAAATCTGGTTTTGGC  150

seq1  TGGTGAGATGGCGCTGGCTGTTCTGGCAGAGGTCCTGAGTTCAATTCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAGATGGCGCTGGCTGTTCTGGCAGAGGTCCTGAGTTCAATTCTCA  200

seq1  GCAAACACATGGCGGTTCATCACCATCAATAAGAGGGATCTGATGCCCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACACATGGCGGTTCATCACCATCAATAAGAGGGATCTGATGCCCTC  250

seq1  TTCTGGCAGCAGGTATACATGCAGACAGAGCACTCAAATGAATAAATTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGCAGCAGGTATACATGCAGACAGAGCACTCAAATGAATAAATTTT  300

seq1  TTAAGTTTCAAAAATACATTATAAAGTTCTAAGTGATGCTTTTAAGAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTTTCAAAAATACATTATAAAGTTCTAAGTGATGCTTTTAAGAGGA  350

seq1  AAGGAATCTTCTAGGGCGTGGAAAAGAAAAATAAGAAAGAAGTGGAGGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAATCTTCTAGGGCGTGGAAAAGAAAAATAAGAAAGAAGTGGAGGGA  400

seq1  ATGAATATGGTCACAGTCAACATTCACACATGGAAATATCAAAGGGAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATATGGTCACAGTCAACATTCACACATGGAAATATCAAAGGGAATT  450

seq1  C  451
      |
seq2  C  451