BAC Information

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BAC

Clone NameB6Ng01-059F12
Chromosome2 (Build37)
Map Location 63,409,988 - 63,411,001
singlet/doubletsinglet
Overlap genenone
Upstream geneFap, Ifih1, Gca, Kcnh7, EG667257
Downstream geneFign, LOC620544
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-059F12.bB6Ng01-059F12.g
ACCDH880656DH880657
length9611,005
definitionDH880656|Mus musculus domesticus DNA, BAC clone: B6Ng01-059F12, 5' end.DH880657|Mus musculus domesticus DNA, BAC clone: B6Ng01-059F12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatttctgagtcttcaattctattcctttgatctacctgttactc
taccaggaccttgcagtttttatcacaattgctctgtagtagaacttaat
gtcaggcatggtaattccgtcagaggttcttttgatgttgagaatagttt
ttgctatcctaggttttttatttttccagatgaatttgcaaattgccctt
tccatctcagtgaagaattgagatggaattttgatggaaattgcattgaa
tctgtagattgctttcagcagaatagcatttttactatattaatcctgct
gatccatgaacatgggagatctttccatcttctgagattttcttcaattt
ctttcttcatagacttgaagttcttatcatacagatctttcacttcctta
gttagagtcacaccaagatattttatattatttgtgactattgtgaaggg
tgttgtttccctaatttctttctcagtccatttatcctttgtgtacagaa
aggccattgacttgtttgacttaattttatatccagctacttcaccaaag
ctgtttatcaggtttaggagttctctggtggaatttttagggtcacttat
atatactaccatatcatctgcaaatagtgatattttgacttcaccctttc
caatttgtatccccttaatgtccttttgctgtcgatttgctctggctaga
acttcaagtactatattaaataggtagggagaaagtgggcatccttgtgt
agtccctgattttagtgggattgctttgagtttctctccatttaattcaa
tgttggctactggtttgctgtagattgctttattatgtttatgtttgggc
cttgaactctgatcttccaaaacttttaaatgaagggggtggatttcgcc
aattgcttctcatctccaactagatgggcaagggttttagtccaaagttg
ttatataggga
gaattctgaacctaattctgaccctttggagagagggttgaaggtagtgt
ttcctgactgctaatctaagaagagatgtatacaagcagtgcggtttgtt
agtttggatttggttttcattttggttttcttgattttttttctcaagaa
aagacaagacaaaggtaatacaaccactcatgccagttaacgattgttcg
atggtagtttagatgtgaaatttgtcctcagcataactttatattctcaa
agttgtattccagatttccataattttgtgtggtaaacgctttgctaaaa
gtcagtgggaaatgtccatccatcagtgcagcttttcaagcaaacttcat
ctctactgagtgctacaaaaaatgtgaaaaatgtttacattcaggaaacc
aacattctaagcagagagaaaaattaactaacacaataaacaaatcattc
acatagcatgcacatagcctcctggccaaagttctgaacccaactagcaa
tagggataaattttgcttgagctcttctggagaaaatgctagcaaagagt
tactcaccaaaaatatggcaccaataactgaccaaagatgatttcagcta
acgctggcttggtgagccaatgagttcattactgtttgtctgtatgaaca
tcagtgagggattaattacagcaatgcggatagtgtcacaatagctgcat
agccacgatgtcccactctgcatgggcaaagtctctggaaggtcacatag
atgactactctttttcgttggtttaccttcctctgtagattacaacacct
cccatggccatttgtaggtgggacacaataacatgcaactagggaggtga
gggacagtggctgagatctttggtagagtctaatggtcttccaccactgt
tttatatgagaagttgcaaagggccatcctctagagctcctaatggaaat
ccagctgtcctttggaagtggtaatgtcggattaagctgtgggccgggtc
caaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_63409988_63411001
seq2: B6Ng01-059F12.g_69_1073 (reverse)

seq1  TCTTGGAACCCTGCCCACAGCCTTATACAGACATTACCACTTTCAAAAGA  50
      |||||| |||| |||||||| ||||  | ||||||||||| ||| |||| 
seq2  TCTTGG-ACCCGGCCCACAG-CTTAATCCGACATTACCAC-TTCCAAAGG  47

seq1  ACAGCTGTGATTTTCCATAGGAGACTCTAGAGGATTGGGCCTTTTGCCAC  100
      ||||||| ||||| |  |||||| |||||||||||  |||| ||||| ||
seq2  ACAGCTG-GATTTCCATTAGGAG-CTCTAGAGGAT--GGCCCTTTGCAAC  93

seq1  TTCCTCATAGAAACAAGTGGTGTGAAGGACCATTAGACTCTACCAAAGAT  150
      || |||||| |||  ||||||| ||| |||||||||||||||||||||||
seq2  TT-CTCATATAAAACAGTGGTG-GAA-GACCATTAGACTCTACCAAAGAT  140

seq1  CTCAGCCACTGTCCCTCACCTACCCTAGTTGCATGTTACTGTGTCCCACC  200
      ||||||||||||||||||||| |||||||||||||||| |||||||||||
seq2  CTCAGCCACTGTCCCTCACCT-CCCTAGTTGCATGTTATTGTGTCCCACC  189

seq1  TACAAATGGCCATGGGAGGTGTTGTAATCTACAGAGGAAGGTTAACCAAC  250
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TACAAATGGCCATGGGAGGTGTTGTAATCTACAGAGGAAGGTAAACCAAC  239

seq1  G-AAAAGAGTAGTCATCTATGTGACCTTCCAGAGACTTTG-CCATGCAGA  298
      | |||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GAAAAAGAGTAGTCATCTATGTGACCTTCCAGAGACTTTGCCCATGCAGA  289

seq1  GTTGGGACATCGTGGCTATGCAGCTATTGTGACACTATCCGCATTGCTGT  348
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  G-TGGGACATCGTGGCTATGCAGCTATTGTGACACTATCCGCATTGCTGT  338

seq1  AATTAATCCCTCACTGATGTTCATACAGAC-AACAGTAATGAACTCATTG  397
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AATTAATCCCTCACTGATGTTCATACAGACAAACAGTAATGAACTCATTG  388

seq1  GCTCACCAAGCCAGCGTTAGCTGAAATCATCTTTGGTCAGTTATTGGTGC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACCAAGCCAGCGTTAGCTGAAATCATCTTTGGTCAGTTATTGGTGC  438

seq1  CATATTTTTGGTGAGTAACTCTTTGCTAGCATTTTCTCCAGAAGAGCTCA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTTTGGTGAGTAACTCTTTGCTAGCATTTTCTCCAGAAGAGCTCA  488

seq1  AGCAAAATTTATCCCTATTGCTAGTTGGGTTCAGAACTTTGGCCAGGAGG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAATTTATCCCTATTGCTAGTTGGGTTCAGAACTTTGGCCAGGAGG  538

seq1  CTATGTGCATGCTATGTGAATGATTTGTTTATTGTGTTAGTTAATTTTTC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTGCATGCTATGTGAATGATTTGTTTATTGTGTTAGTTAATTTTTC  588

seq1  TCTCTGCTTAGAATGTTGGTTTCCTGAATGTAAACATTTTTCACATTTTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGCTTAGAATGTTGGTTTCCTGAATGTAAACATTTTTCACATTTTT  638

seq1  TGTAGCACTCAGTAGAGATGAAGTTTGCTTGAAAAGCTGCACTGATGGAT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCACTCAGTAGAGATGAAGTTTGCTTGAAAAGCTGCACTGATGGAT  688

seq1  GGACATTTCCCACTGACTTTTAGCAAAGCGTTTACCACACAAAATTATGG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATTTCCCACTGACTTTTAGCAAAGCGTTTACCACACAAAATTATGG  738

seq1  AAATCTGGAATACAACTTTGAGAATATAAAGTTATGCTGAGGACAAATTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTGGAATACAACTTTGAGAATATAAAGTTATGCTGAGGACAAATTT  788

seq1  CACATCTAAACTACCATCGAACAATCGTTAACTGGCATGAGTGGTTGTAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCTAAACTACCATCGAACAATCGTTAACTGGCATGAGTGGTTGTAT  838

seq1  TACCTTTGTCTTGTCTTTTCTTGAGAAAAAAAATCAAGAAAACCAAAATG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTTGTCTTGTCTTTTCTTGAGAAAAAAAATCAAGAAAACCAAAATG  888

seq1  AAAACCAAATCCAAACTAACAAACCGCACTGCTTGTATACATCTCTTCTT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCAAATCCAAACTAACAAACCGCACTGCTTGTATACATCTCTTCTT  938

seq1  AGATTAGCAGTCAGGAAACACTACCTTCAACCCTCTCTCCAAAGGGTCAG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAGCAGTCAGGAAACACTACCTTCAACCCTCTCTCCAAAGGGTCAG  988

seq1  AATTAGGTTCAGAATTC  1014
      |||||||||||||||||
seq2  AATTAGGTTCAGAATTC  1005