BAC Information

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BAC

Clone NameB6Ng01-060E03
Chromosome7 (Build37)2 (Build37)
Map Location 33,298,534 - 33,299,642142,776,676 - 142,777,698
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100043834, LOC546947, LOC677233, LOC100043337, LOC546949, LOC100043836, EG626305, EG668342, EG626330, LOC100043340, LOC100043343, EG626358, LOC668351, EG384593, LOC100043351, LOC100043352, LOC100043353, EG384594, LOC100043838, EG668361, LOC668362, EG624584, LOC100043355, LOC546951, EG626740, EG668371, EG668377, LOC100043842, LOC634929, EG668379, EG668381, LOC668386, LOC626373, EG384589, EG668393, EG330689, LOC100043362
Downstream geneLOC100043365, EG384591, LOC668398, EG384596, LOC100043370, LOC434161, EG270499, LOC100043845, LOC100043373, LOC668410, EG624439, LOC100043376, LOC100043379, LOC100043383, EG668411, LOC100043850, LOC100043386, LOC668416, EG668526, LOC100043388, LOC270234, EG668419, EG668422, EG546954, LOC100043856, LOC100043857, EG545947, EG434676, EG668431, Abpd, EG545948, LOC435963, LOC435962
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060E03.bB6Ng01-060E03.g
ACCDH881282DH881283
length1,104934
definitionDH881282|Mus musculus domesticus DNA, BAC clone: B6Ng01-060E03, 5' end.DH881283|Mus musculus domesticus DNA, BAC clone: B6Ng01-060E03, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(33,298,534 - 33,299,642)(142,776,676 - 142,777,698)
sequence
gaattccagatgacccttcaaccccctctacctgggcctgtagtagagca
tctcccactgcacagggacatcaggggactgttggaaggatgctaagagg
caagactgtggtaggccccctgttccacccaccttggcaatggactgctt
aagcccattcactgagatagagagaaactgtcacccctggtattgccatt
ttaggcttcatgaaagggttcttttgacagtcttttgtccttctttagaa
agtgtgggctgaacaaacaccaatggaggaggctgaagacagtagagcaa
agcctgaggcagacatgtgaaggctgaagggtcagcaggatgagctatga
aatcggccaagaggtttactgctctatggtagttgaagtatttgacgggg
gaaatgcaggagagtgtaggtagggtcatggaatgaagagagaaagagga
agactctgaagaagaacacaatggatccagaggacaggataattagaacc
caattgccagaagtggtctaggaatttgtacagtctttggagactacact
agggcctggagactcattatggcagagtgccaaaaaggctcagcttcctg
tccatgctgtggaggatctgcagcacaggtaggcctcagagtcccatgct
agtaagaggactgctcaggagagtataccactgctgcctctaccatgtgc
tacctgttggatttaatcccttgctgctgtgtattaaaatgctaagtact
ggaatccaggggatgggatctcccaaacctccaactacttgccaatctct
ttaacaaattctcacatacaacagatgttgcttagtaaattagttcacct
atatctctcactatctaacaaaatgtgactgccaggcaatgatggagagg
agagagtattctgggatttttttttctaggctgtgtgtcacaggtaggga
tcataggcaaagaagaggagagaagaagaggaaaaagatggagaaagggg
aggctgccatggggcttgatgtcctaggagcacatgaccagagcttgtgg
accatagagaacaggctgatggagaagaataaccctggcacaacttaaac
agca
gaattctttgtttatctcttagccccatttttaatggggttatttgtttt
tctggagtccaccttcttgagttctttatatatattgtatattattcccc
tatctgatttaggataggtaaagatcctttcccaatctgttggtggcctt
tttgtcctattgacattgtctgttgccttgcagaagctttgcagtttcat
aagatcccatttgtcaattctcgatcttacagcacaagccattgctgatc
tattcaggaagttttcccctgtgccatatcttcgaggcttttccctactt
tctcctctataagtttcagtgtctcttgtcttatttggagttccttgatc
ctcttagatttgaccttattacaaggagatagaaatggatcaattttcat
tcttctatatgataactaccaataccatttgttaaaaatgctatcttttt
tccactggatggtttttgcttccttgtcaaagttcaattgaccataggtt
tgtgggttcatttctgtgtcttcaattctattccattggtctacttgtct
gttgctataccagtatattgcaatttttatgacaattgctctgtagtaca
gctataggtcaggcatggtgattccaatagaggttcttcttatatccttg
agaagattttttgctatccaagtttttttttttttttgttttgttttttt
ttttattctggataaatttgcagattgctctttctaattcgttgaagaat
tgagtttgattttgatggggattgcattgaatctgtagattgcctttggc
aagatagccatttttactatattgatcctgccaaatcatgagtatgggag
ttctttccatcttctgagatcttctttaatttctttcttcagagacttga
agttcttatcctacagatcttccacttcctttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_33298534_33299642
seq2: B6Ng01-060E03.b_46_1149 (reverse)

seq1  TGCTGTTTAAGTGTTGCCCAGGGTTATTTCTTCTCCATCAGCCTGTTCTC  50
      ||||||||||||  || ||||||||| |||||||||||||||||||||||
seq2  TGCTGTTTAAGTTGTG-CCAGGGTTA-TTCTTCTCCATCAGCCTGTTCTC  48

seq1  -ATGGTCCAC-AGCTCCTGGTCATGTGCTCCTGAGACATCAGGCCCCATG  98
       ||||||||| |||| ||||||||||||||||  ||||||| ||||||||
seq2  TATGGTCCACAAGCT-CTGGTCATGTGCTCCTAGGACATCAAGCCCCATG  97

seq1  GCAGCCTTCCCCTTTCTCCATCTTTTTCCTCTTCTTCTCTCCTCTTCTGT  148
      |||||| ||||||||||||||||||||||||||||||||||||||||| |
seq2  GCAGCC-TCCCCTTTCTCCATCTTTTTCCTCTTCTTCTCTCCTCTTCT-T  145

seq1  TGCCTTATGATCCCTACCTGTGACACACAGCCTAGAAAAAAAAATCCCAG  198
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCC-TATGATCCCTACCTGTGACACACAGCCTAGAAAAAAAAATCCCAG  194

seq1  AATACCTCTCTCCTCTCCATCATTGCCTGGCAGTCACATTTTGTTAGATA  248
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AATA-CTCTCTCCTCTCCATCATTGCCTGGCAGTCACATTTTGTTAGATA  243

seq1  GTGAGAGATATAGGTGAACTAATTTACTAAGCAACATCTGTTGTATGTGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGAGATATAGGTGAACTAATTTACTAAGCAACATCTGTTGTATGTGA  293

seq1  GAATTTGTTAAAGAGATTGGCAAGTAGTTGGAGGTTTGGGAGATCCCATC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTGTTAAAGAGATTGGCAAGTAGTTGGAGGTTTGGGAGATCCCATC  343

seq1  CCCTGGATTCCAGTACTTAGCATTTTAATACACAGCAGCAAGGGATTAAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGATTCCAGTACTTAGCATTTTAATACACAGCAGCAAGGGATTAAA  393

seq1  TCCAACAGGTAGCACATGGTAGAGGCAGCAGTGGTATACTCTCCTGAGCA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACAGGTAGCACATGGTAGAGGCAGCAGTGGTATACTCTCCTGAGCA  443

seq1  GTCCTCTTACTAGCATGGGACTCTGAGGCCTACCTGTGCTGCAGATCCTC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCTTACTAGCATGGGACTCTGAGGCCTACCTGTGCTGCAGATCCTC  493

seq1  CACAGCATGGACAGGAAGCTGAGCCTTTTTGGCACTCTGCCATAATGAGT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCATGGACAGGAAGCTGAGCCTTTTTGGCACTCTGCCATAATGAGT  543

seq1  CTCCAGGCCCTAGTGTAGTCTCCAAAGACTGTACAAATTCCTAGACCACT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGGCCCTAGTGTAGTCTCCAAAGACTGTACAAATTCCTAGACCACT  593

seq1  TCTGGCAATTGGGTTCTAATTATCCTGTCCTCTGGATCCATTGTGTTCTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCAATTGGGTTCTAATTATCCTGTCCTCTGGATCCATTGTGTTCTT  643

seq1  CTTCAGAGTCTTCCTCTTTCTCTCTTCATTCCATGACCCTACCTACACTC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGAGTCTTCCTCTTTCTCTCTTCATTCCATGACCCTACCTACACTC  693

seq1  TCCTGCATTTCCCCCGTCAAATACTTCAACTACCATAGAGCAGTAAACCT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCATTTCCCCCGTCAAATACTTCAACTACCATAGAGCAGTAAACCT  743

seq1  CTTGGCCGATTTCATAGCTCATCCTGCTGACCCTTCAGCCTTCACATGTC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCCGATTTCATAGCTCATCCTGCTGACCCTTCAGCCTTCACATGTC  793

seq1  TGCCTCAGGCTTTGCTCTACTGTCTTCAGCCTCCTCCATTGGTGTTTGTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCAGGCTTTGCTCTACTGTCTTCAGCCTCCTCCATTGGTGTTTGTT  843

seq1  CAGCCCACACTTTCTAAAGAAGGACAAAAGACTGTCAAAAGAACCCTTTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCACACTTTCTAAAGAAGGACAAAAGACTGTCAAAAGAACCCTTTC  893

seq1  ATGAAGCCTAAAATGGCAATACCAGGGGTGACAGTTTCTCTCTATCTCAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGCCTAAAATGGCAATACCAGGGGTGACAGTTTCTCTCTATCTCAG  943

seq1  TGAATGGGCTTAAGCAGTCCATTGCCAAGGTGGGTGGAACAGGGGGCCTA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGGGCTTAAGCAGTCCATTGCCAAGGTGGGTGGAACAGGGGGCCTA  993

seq1  CCACAGTCTTGCCTCTTAGCATCCTTCCAACAGTCCCCTGATGTCCCTGT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGTCTTGCCTCTTAGCATCCTTCCAACAGTCCCCTGATGTCCCTGT  1043

seq1  GCAGTGGGAGATGCTCTACTACAGGCCCAGGTAGAGGGGGTTGAAGGGTC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGGGAGATGCTCTACTACAGGCCCAGGTAGAGGGGGTTGAAGGGTC  1093

seq1  ATCTGGAATTC  1109
      |||||||||||
seq2  ATCTGGAATTC  1104

seq1: chr2_142776676_142777698
seq2: B6Ng01-060E03.g_68_619 (reverse)

seq1  ACAGACAAGTAGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCA  50
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ACAGACAAGTAGACCAATGGAATAGAATTGAAGACACAGAAATGAACCCA  50

seq1  CACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGAG  100
      || ||||||||||| |||| ||| ||||||| ||| |||||||||||| |
seq2  CAAACCTATGGTCAATTGAACTTTGACAAGGAAGCAAAAACCATCCAGTG  100

seq1  GAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTAT  150
      ||| ||||| |||||||| ||||| ||||         | |||| |||||
seq2  GAAAAAAGATAGCATTTTTAACAAATGGT---------ATTGGTAGTTAT  141

seq1  CATGTAGAAGAATGGGAATCGATCCATACTTATCTCCTTGTACTAAGGTC  200
      ||| ||||||||||  ||| |||||||   |||||||||||| |||||||
seq2  CATATAGAAGAATGAAAATTGATCCATTTCTATCTCCTTGTAATAAGGTC  191

seq1  AAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACT  250
      ||||||||| ||||||||||||| || |||| || |||||||||||||||
seq2  AAATCTAAGAGGATCAAGGAACTCCAAATAAGACAAGAGACACTGAAACT  241

seq1  TATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGACA  300
      ||||||||||||||| ||||||||||| |||||||| ||||||||||| |
seq2  TATAGAGGAGAAAGTAGGGAAAAGCCTCGAAGATAT-GGCACAGGGGAAA  290

seq1  AATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTGAC  350
      | |||||||| ||| |||||||||||||||||||||||||||||||||||
seq2  ACTTCCTGAATAGATCAGCAATGGCTTGTGCTGTAAGATCGAGAATTGAC  340

seq1  AAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGT  400
      |||||||| || |||||||| ||||| ||||||||||||| |||||  ||
seq2  AAATGGGATCTTATGAAACTGCAAAGCTTCTGCAAGGCAACAGACAATGT  390

seq1  CAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTACCTATC  450
      ||||| ||||||||| ||||||||||||||||||||||||||||||||||
seq2  CAATAGGACAAAAAGGCCACCAACAGATTGGGAAAGGATCTTTACCTATC  440

seq1  CTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAAGAAG  500
      ||||||||||||||||| |||||| ||| |||||||||||||||||||||
seq2  CTAAATCAGATAGGGGAATAATATACAATATATATAAAGAACTCAAGAAG  490

seq1  GTGGACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCACAAAA  550
      ||||||| ||||||| |||||||||||||| |||||||||||| |     
seq2  GTGGACTCCAGAAAAACAAATAACCCCATT-AAAAATGGGGCTAA-----  534

seq1  CCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAAC  600
               |  | ||| | || |||                        
seq2  ---------GAGATAAACAAAGAATTC-----------------------  552

seq1  TGGTTGTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTG  650
                                                        
seq2  --------------------------------------------------  552

seq1  TACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGA  700
                                                        
seq2  --------------------------------------------------  552

seq1  CACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGC  750
                                                        
seq2  --------------------------------------------------  552

seq1  ACAGGGGAAAAATTCCTGAACAGAAGAGCAATGGCTTGTGCTGTAAGATC  800
                                                        
seq2  --------------------------------------------------  552

seq1  GAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAA  850
                                                        
seq2  --------------------------------------------------  552

seq1  AAGACACTGTCTATAAGACAAAAAGACCACCAACAGACTGGGAAAGGATC  900
                                                        
seq2  --------------------------------------------------  552

seq1  TTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGA  950
                                                        
seq2  --------------------------------------------------  552

seq1  ACTCAAGAAGGTGGACCTCAGAAAATCAAATAACCCCATTAAAAAATGGG  1000
                                                        
seq2  --------------------------------------------------  552

seq1  GCTCAGAACTGAACAAAGAATTC  1023
                             
seq2  -----------------------  552