BAC Information

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BAC

Clone NameB6Ng01-061F15
Chromosome2 (Build37)
Map Location 138,071,921 - 138,242,330
singlet/doubletdoublet
Overlap geneBtbd3
Upstream genenone
Downstream geneLOC628103
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-061F15.bB6Ng01-061F15.g
ACCDH882055DH882056
length1,0631,108
definitionDH882055|Mus musculus domesticus DNA, BAC clone: B6Ng01-061F15, 5' end.DH882056|Mus musculus domesticus DNA, BAC clone: B6Ng01-061F15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(138,071,921 - 138,072,993)(138,241,189 - 138,242,330)
sequence
gaattctatttgtgaattctgtttgtttctgaagaaaaccaaagctagga
agtcgagtggtatgcacttgtttttgctgtcatattggaccctgggaagt
ctaacctgggaggagctggaaccacggggagtccagttcaagttatgatc
tggcggggaagaacagctaccctcaaaaatattgagtctttccttcatca
tgagcaggcaaagagtgctaaaccttctcaaacaacaaagaacagagcat
gtccaggtggtgttttgtggctgctgttgtctactttttgttatttactc
atgttggcataaaatgttgcatggcaattcaaacctgcatggagtgcaat
ttacttgtacaaggttatttatattacatgcttaaaggcattaaaaagga
atatacatacttatatacattatacatatatacatacacgcatatgtatt
cattacatatatacttctgaatctgaaggattcactttgaaactggattg
aaactggacaggcaccaaataagtattcctacagaagaaaactcacttgt
cttcagtcttaaaccaaagcttattcatgttgccaattggtaaaacacaa
tgtcttctactgtaatgcttggatctgtgtatatctgcctcaaaacacaa
caaaaaacggttttacataatgaatcaatccaatctatcaattccaaaga
aggtcggagaaaaacaaaggttcccctccaaaaacagtcatgaagtcgtg
ttgtcattagcatatgcaaatgaactatgtttatctttttgaaatcacgt
tcacaattgtactggctggtttatgtgacaacttgacacaggctgggtta
tcacagagaaaggagcttcagttggggaaatgcctccttatctccaactg
tggggtatttcctcatttgtgatcacgggaaagggctcctagtgggttgg
gatctctctgggctggcatgcttgagttctattatacaggaggctgatca
gccaggggagcaatccataaagatcattcttcgaggcctctgcatcagct
catggcttcctga
gaattcacttattacttggtgttatataactaactgcaaacatctgattt
ccacagtgacaccattgtgagtacagccacagaccagcagccccatccga
aagactgtaagaaatgtactttcttgtactctacctgaactactgactta
tgagatgaaggccaacatgtatatatctcaaaattctcagatgattttat
gcacgctggctgaagtttgggaagtcgtaggcccgagggcttatggaatc
atcaacggtagggcagttacacacatggattcacagcagtgggcatgccc
aaacctaagccacataacatctcaacatgaaggtgaggagggtatcttta
aatatcaccgccagtttgaggaacaattgccatttgataggtgctaggag
agggaacttccgttttctttgatggtatgacacttcctgggcctacccgg
ttcagggtaggctcccgtcccaggattagttgggtaatattaactgaatt
cattggaaaatgagaaaagtataaaacaattcaaagcggggtgcggtggc
aggtgacaatggaaggttacacataagaggagcaggtgtcgggggatcca
aatgcactgtacaatattgtcaaaggaatttctaaaagtattattttata
aaagaaagtaaatatcccaaaggggaaaaatgtttgcataatggaaaatt
ccttcagaggttccaaagtcaagcttgtcacaaaagattctcaaagaaat
tggaagagaaaaagattacagtgaatttcatcacaaaaatcaggaaaaga
taaaattactcgtgcacttatcttagactgtctttgacagagtggtaaat
actgtgtgaagaaaaagtgagagtcgccctcctaaaaagacctcttgtgg
taaccaaaattgatttgttttacaagtcaattttgtcacttaagacactc
agacgtccacataggcgcgatgttcatgtgcatgaagaaacattcatgat
actggtaatcatcatgatactgaaaaaatcaagcaaatccaatcttcact
gtgctgggctctttccaagagcagcattttaatctcaaacatacagaaaa
ccatctat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_138071921_138072993
seq2: B6Ng01-061F15.b_43_1105

seq1  GAATTCTATTTGTGAATTCTGTTTGTTTCTGAAGAAAACCAAAGCTAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTTGTGAATTCTGTTTGTTTCTGAAGAAAACCAAAGCTAGGA  50

seq1  AGTCGAGTGGTATGCACTTGTTTTTGCTGTCATATTGGACCCTGGGAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCGAGTGGTATGCACTTGTTTTTGCTGTCATATTGGACCCTGGGAAGT  100

seq1  CTAACCTGGGAGGAGCTGGAACCACGGGGAGTCCAGTTCAAGTTATGATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACCTGGGAGGAGCTGGAACCACGGGGAGTCCAGTTCAAGTTATGATC  150

seq1  TGGCGGGGAAGAACAGCTACACACAAGAATATTGAGTCTTTCCTTCATCA  200
      |||||||||||||||||||| | ||| |||||||||||||||||||||||
seq2  TGGCGGGGAAGAACAGCTACCCTCAAAAATATTGAGTCTTTCCTTCATCA  200

seq1  TGAGCAGGCAAAGAGTGCTAAACCTTCTCAAACGACAAAGAACAGAGCAT  250
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TGAGCAGGCAAAGAGTGCTAAACCTTCTCAAACAACAAAGAACAGAGCAT  250

seq1  GTCCAGGTGGTGTTTTGTGGCTGCTGTTGTCTACTTTTTGTTATTTACTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGGTGGTGTTTTGTGGCTGCTGTTGTCTACTTTTTGTTATTTACTC  300

seq1  ATGTTGGCATAAAATGTTGCATGGCAATTCAAAGCTGCATGGAGTGCAAT  350
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ATGTTGGCATAAAATGTTGCATGGCAATTCAAACCTGCATGGAGTGCAAT  350

seq1  TTACTTGTACAAGGTTATTTATATTACATGCTTAAAGGCATTAAAAAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTGTACAAGGTTATTTATATTACATGCTTAAAGGCATTAAAAAGGA  400

seq1  ATATACATACATATATACATTATACATATATACATACACACATATGTATT  450
      |||||||||| |||||||||||||||||||||||||||| ||||||||||
seq2  ATATACATACTTATATACATTATACATATATACATACACGCATATGTATT  450

seq1  CATTACATATATACTTCTGAATCTGAAGGATTCAGTTTGAAACTGGATTG  500
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CATTACATATATACTTCTGAATCTGAAGGATTCACTTTGAAACTGGATTG  500

seq1  AAACTGGACAGGCACCAAATAAGTATTCCTACAGAAGAAAACACACTTGT  550
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AAACTGGACAGGCACCAAATAAGTATTCCTACAGAAGAAAACTCACTTGT  550

seq1  CTTCAGTCTTAAACCAAAGCTTAGTCATGTTGCCAATTGGTAAAACACAA  600
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CTTCAGTCTTAAACCAAAGCTTATTCATGTTGCCAATTGGTAAAACACAA  600

seq1  TGTCTTCTACTGTAATGCTTGGATCTGTGTATATCTGCCTCAAAACACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTCTACTGTAATGCTTGGATCTGTGTATATCTGCCTCAAAACACAA  650

seq1  CAAAAAACGGTTTTACATAATGAATCAATCCAATCTATCAATTCCAAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAACGGTTTTACATAATGAATCAATCCAATCTATCAATTCCAAAGA  700

seq1  AGTTCGGAGAAAAACAAAGGTTCCAGCCCAAAAACAGTCAGGAAAATCGT  750
      || |||||||||||||||||||||   ||||||||||||| | || ||||
seq2  AGGTCGGAGAAAAACAAAGGTTCCCCTCCAAAAACAGTCATG-AAGTCGT  749

seq1  GTTGTCATTAGCATATGCAAATGAACATATATTTAATTTTTTGAAATCAG  800
      |||||||||||||||||||||||||| ||| ||||  |||||||||||| 
seq2  GTTGTCATTAGCATATGCAAATGAAC-TATGTTTATCTTTTTGAAATCAC  798

seq1  GTTCAGAATTGTACTGGCTGGTTTTATGTGTCAACTTGACACAGGCTGGG  850
      ||||| ||||||||||||||| |||||||| |||||||||||||||| ||
seq2  GTTCACAATTGTACTGGCTGG-TTTATGTGACAACTTGACACAGGCT-GG  846

seq1  GTTATCACAGAGAAAGGAGCTTCAGTTGGGGAAATGCCTCCATAAGCTCC  900
      ||||||||||||||||||||||||||||||||||||||||| | | ||||
seq2  GTTATCACAGAGAAAGGAGCTTCAGTTGGGGAAATGCCTCC-TTATCTCC  895

seq1  AACTGTGGGGTATTTTCTCAATTAGTGATCAAGGGGAAAGGGCCCCTTGT  950
      ||||||||||||||| ||| ||| |||||| | |||||||||| ||| ||
seq2  AACTGTGGGGTATTTCCTC-ATTTGTGATC-ACGGGAAAGGGCTCCTAGT  943

seq1  GGG-TGGGACCATCTCTGGGCTGGTAGTCTTGGGTTCTATAAGAGAGCAG  999
      ||| ||||| | |||||||||||| |  |||| ||||||| | | || ||
seq2  GGGTTGGGATC-TCTCTGGGCTGGCATGCTTGAGTTCTATTATACAGGAG  992

seq1  GCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAAGAACATCCCTCCATGGCC  1049
      ||||| | ||||||||| ||||| ||| |||||| ||| | || | ||||
seq2  GCTGATC-AGCCAGGGG-AGCAATCCA-TAAAGATCATTCTTCGA-GGCC  1038

seq1  TCTGCATCAGCTCCT-GCTTCCTGA  1073
      ||||||||||||| | |||||||||
seq2  TCTGCATCAGCTCATGGCTTCCTGA  1063

seq1: chr2_138241189_138242330
seq2: B6Ng01-061F15.g_68_1175 (reverse)

seq1  ATAGATGGTTTGTCTGTTTGTTATGGGATTAAAGATGCTTGCTCTTGGCA  50
      ||||||||||| ||||| |||| || ||||||| |||| ||||||||| |
seq2  ATAGATGGTTT-TCTGTATGTT-TGAGATTAAA-ATGC-TGCTCTTGG-A  45

seq1  AAGAGGCCAAAGCACAGCTGAAAGATTGGATACTGCTAGATTATTATCAT  100
      ||||| ||  ||||||| || ||||||||||  |||| |||| || ||| 
seq2  AAGAGCCC--AGCACAG-TG-AAGATTGGAT-TTGCTTGATT-TTTTCA-  88

seq1  GTATCATGAATGTATTACCATGTATCATGAATGGTATCTTCATGCACATG  150
      |||||||| ||| ||||||| ||||||||||| || ||||||||||||||
seq2  GTATCATG-ATG-ATTACCA-GTATCATGAAT-GTTTCTTCATGCACATG  134

seq1  CACGTGTGTGTCTATGTGTGACTGTCTGTGTGTTCTCAAAGTGAGCAAAA  200
       || |  | | ||||||| ||| ||||| ||||  |  |||||| |||||
seq2  AACAT-CGCGCCTATGTG-GAC-GTCTGAGTGTCTT--AAGTGA-CAAAA  178

seq1  TTTGACTTTGTTAAAACAAATCAATTTTTGGTTCACCAACAAGAGGTTCT  250
       |||||||   ||||||||||||| |||||||| ||| |||||||||   
seq2  -TTGACTT--GTAAAACAAATCAA-TTTTGGTT-ACC-ACAAGAGGT--C  220

seq1  TTTTTGGGACGGCTGACTCTCACTTGTCTCTTCACACAGTATTTAACACT  300
      ||||| ||| ||| ||||||||||| | ||||||||||||||||| ||||
seq2  TTTTTAGGAGGGC-GACTCTCACTT-TTTCTTCACACAGTATTTACCACT  268

seq1  CTGTCAAAGACAGTCTAAGATAAGTGCACGAGTAATTTTATCTTTTCCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAAAGACAGTCTAAGATAAGTGCACGAGTAATTTTATCTTTTCCTG  318

seq1  ATTTTTGTGATGAAATTCACTGTATATTTTTTTTTCTTCCAATTTCTTTG  400
      |||||||||||||||||||||||| || ||||| ||||||||||||||||
seq2  ATTTTTGTGATGAAATTCACTGTA-ATCTTTTTCTCTTCCAATTTCTTTG  367

seq1  AGAATCTTTTGTGACATTGCTTGACTTTTGGGCCTCTGAAGGAATTTTCC  450
      ||||||||||||||||  |||||||||| |  ||||||||||||||||||
seq2  AGAATCTTTTGTGACA-AGCTTGACTTTGGAACCTCTGAAGGAATTTTCC  416

seq1  ATTATGCAAACATTTTTCCCCTTTGGGATATTTACTTTCTTTTAAAAAAT  500
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ATTATGCAAACATTTTTCCCCTTTGGGATATTTACTTTCTTTTATAAAAT  466

seq1  AATACTTTTAGAAATTCCTTTGACAATATTGTACAGTGTATTTGGATCCC  550
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AATACTTTTAGAAATTCCTTTGACAATATTGTACAGTGCATTTGGATCCC  516

seq1  CCGACACCTGCTCCTCTTATGTGTAACCTTCCATTGTCACCTGCCACCGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGACACCTGCTCCTCTTATGTGTAACCTTCCATTGTCACCTGCCACCGC  566

seq1  ACCCCGCTTTGAATTGTTTTATACTTTTCTCATTTTCCAATGAATTCAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCGCTTTGAATTGTTTTATACTTTTCTCATTTTCCAATGAATTCAGT  616

seq1  TAATATTACCCAACTAATCCTGGGACGGGAGCCTACCCTGAACCGGGTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTACCCAACTAATCCTGGGACGGGAGCCTACCCTGAACCGGGTAG  666

seq1  GCCCAGGAAGTGTCATACCATCAAAGAAAACGGAAGTTCCCTCTCCTAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGGAAGTGTCATACCATCAAAGAAAACGGAAGTTCCCTCTCCTAGC  716

seq1  ACCTATCAAATGGCAATTGTTCCTCAAACTGGCGGTGATATTTAAAGATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTATCAAATGGCAATTGTTCCTCAAACTGGCGGTGATATTTAAAGATA  766

seq1  CCCTCCTCACCTTCATGCTGAGATGTTATGTGGCTTAGGTTTGTGCATGC  850
      ||||||||||||||||| ||||||||||||||||||||||||| ||||||
seq2  CCCTCCTCACCTTCATGTTGAGATGTTATGTGGCTTAGGTTTGGGCATGC  816

seq1  CAACTGCTGTGAATCCATGTGTGTAACTGCCCTACCGTTGATGATTCCAT  900
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGCTGTGAATCCATGTGTGTAACTGCCCTACCGTTGATGATTCCAT  866

seq1  AAGCCCTCGGGCCTACGACTTCCCAAACTTCAGCCAGCGTGCATAAAATC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCTCGGGCCTACGACTTCCCAAACTTCAGCCAGCGTGCATAAAATC  916

seq1  ATCTGAGAATTTTGAGATATATACATGTTGGCCTTCATCTCATAAGTCAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAGAATTTTGAGATATATACATGTTGGCCTTCATCTCATAAGTCAG  966

seq1  TAGTTCAGGTAGAGTACAAGAAAGTACATTTCTTACAGTCTTTCGGATGG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCAGGTAGAGTACAAGAAAGTACATTTCTTACAGTCTTTCGGATGG  1016

seq1  GGCTGCTGGTCTGTGGCTGTACTCACAATGGTGTCACTGTGGAAATCAGA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCTGGTCTGTGGCTGTACTCACAATGGTGTCACTGTGGAAATCAGA  1066

seq1  TGTTTGCAGTTAGTTATATAACACCAAGTACTAAGTGAATTC  1142
      |||||||||||||||||||||||||||||| |||||||||||
seq2  TGTTTGCAGTTAGTTATATAACACCAAGTAATAAGTGAATTC  1108