BAC Information

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BAC

Clone NameB6Ng01-061H23
Chromosome2 (Build37)
Map Location 110,966,848 - 110,967,926
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668797, Bbox1, 1110018M03Rik, LOC668799, Slc5a12, Muc15, LOC668802
Downstream geneLOC623270, LOC623301, 4930430A15Rik, Olfr1275, Olfr1276, Olfr1277, Olfr1278, Olfr1279, Olfr1280, Olfr1281, Olfr1282, Olfr1283, Olfr1284, LOC100043465, Olfr1285, Olfr1286, Olfr1287, Olfr1288, Olfr1289, Olfr1290, GA_x5J8B7W4T2P-95628-96096, Olfr1292-ps1, Olfr1293, Olfr1294, Olfr1295, LOC668822, Olfr1297, Olfr1298, Olfr1299, Olfr1300-ps1, Olfr1301, Olfr1302, Olfr1303, Olfr249-ps1, LOC668825, Olfr1305, Olfr1306, LOC668827, Olfr1307, Olfr1308, Olfr1309, LOC433463, Olfr1310, Olfr1311, Olfr1312, Olfr1313, Olfr1314, Olfr1315-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-061H23.bB6Ng01-061H23.g
ACCDH882158DH882159
length1,1611,060
definitionDH882158|Mus musculus domesticus DNA, BAC clone: B6Ng01-061H23, 5' end.DH882159|Mus musculus domesticus DNA, BAC clone: B6Ng01-061H23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcatagaagcacctgaaaaaatg
gtcagcatccttaatctttagagaaatgcaaatcaaaacaacccctagat
tccatctcaaaccagtcagaatggctaagataaaaaattcaggtgacagc
agttgctggcgaggatgtggagaaagaggaatactccattgttggtggga
ttgcaagcttgtacaaccactctggaaatcagtctggcctttcctcagaa
aattggacatagtactaatggaggatcccgcaatacctctccttgggcat
atatccagaagatgttccaactggtaagaaggacacatgctccactatgt
tcatagaagccttatttataataaccagaagctggagagaacccagatgc
ccctcaacagaggaatggatacaaaaaaatatggtacatttacacatgga
gtacttctcagctcttaaaagaaatgaatttatgaaattcctaggcaaat
ggttggacctggagggcaacatcctgagtgaggtaacccaatcacaaaag
aactcaaatgatatatactcactgataagtgtttattagctcagaaactt
agtataccagagatgtaagatacaatttgcaaaacacatgaaaatgaaga
agaacaaagaccaaagtgtggacaatttgccccctcttagaattgggaac
aatcacctatggaaggagttacagagacaaagtttggagctgagacaaaa
ggatggaccatctagagactgccatatccagtgatccatcccataattag
cctccaaacgatgacaccattgcatacactagcaagagtttgctgaaaga
accctgatatagctgtctcttgtaagactaggcctgggcctagcaaacac
ataagtggatgctcacagtcagctattggatggattacagggccccaatg
gaggagctagagaaagtatccaggagctatagatatctgcaccctgtagg
tgtagaacatatgactacctgtaccaggagctcttgactctagctgcata
gtatccaagatgcctagtttgtcatcacggaaggaagtccattgactgtc
aacttatatgcctcagtcagggaacctcagaagccaaagtggaatggggt
ggtagggagat
gaattctcagattgcttgctaaccaaaatgtctctcaaacttggcactag
aattctatgtataaacctcaagtgatattttgtattaatatgagtttcta
ctatcacataacactgtgaagtaatatatatttgtatattagtgtctttt
tctatcatttcttgagctaccaggtgaagtaaatgaaaatacctgaactc
tgtcaagaactgccctgtataatattggtagcctgtaggaaaatgagtct
tgtttttcttacgcatacaggtaacaggacttgttttcacaattttgctt
tttacattttgtgcttctacctgtatattatattctacagtcattagaat
atgtcatttaattcatttgtctctctctgaacactacttctgaataagtt
tacaagttatatgtaaattaattattattttccaccatgcataaaagtgt
acattgaaataggaaaaagaaagaaagaaagaaagagagagagagagaga
gagagagagagagagagagagagaaagaaagaaagaaagaaagaaagaaa
gaaagaaagaaagaaagcaagccgattgagcaaatcatgaggagcaagcc
agtgagcagtactccctgcagcccctggcctctatcagcttctgtctcta
gttcactgctcttttcaagtccctgccctgattttttttttatgataaaa
tgttgtatggaagtgtgcgtaaaagatatcatcttcatcatcaacaacaa
taaaaaataaaaaccaaacactaagaacttttcctccctatgctgctttt
ggtgaccctgttcatcacagcagtagaaactctaagtttaaacatgaaaa
aggagactattttatgattagttaaattctgcttcatataaatattcaat
ttagatataattgtaacttcatgtgatatgtactttttttaccataaaca
ctttgattttatttgtttaatatattttaaatttaaatattttgactgga
tttacaaatttaaattatttacctaagtatagggtctaactcttttttcc
tcattcagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_110966848_110967926
seq2: B6Ng01-061H23.g_67_1126

seq1  GAATTCTCAGATTGCTTGCTAACCAAAATGTCTCTCAAACTTGGCACTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGATTGCTTGCTAACCAAAATGTCTCTCAAACTTGGCACTAG  50

seq1  AATTCTATGTATAAACCTCAAGTGATATTTTGTATTAATATGAGTTTCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTATGTATAAACCTCAAGTGATATTTTGTATTAATATGAGTTTCTA  100

seq1  CTATCACATAACACTGTGAAGTAATATATATTTGTATATTAGTGTCTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCACATAACACTGTGAAGTAATATATATTTGTATATTAGTGTCTTTT  150

seq1  TCTATCATTTCTTGAGCTACCAGGTGAAGTAAATGAAAATACCTGAACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCATTTCTTGAGCTACCAGGTGAAGTAAATGAAAATACCTGAACTC  200

seq1  TGTCAAGAACTGCCCTGTATAATATTGGTAGCCTGTAGGAAAATGAGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAGAACTGCCCTGTATAATATTGGTAGCCTGTAGGAAAATGAGTCT  250

seq1  TGTTTTTCTTACGCATACAGGTAACAGGACTTGTTTTCACAATTTTGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTCTTACGCATACAGGTAACAGGACTTGTTTTCACAATTTTGCTT  300

seq1  TTTACATTTTGTGCTTCTACCTGTATATTATATTCTACAGTCATTAGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACATTTTGTGCTTCTACCTGTATATTATATTCTACAGTCATTAGAAT  350

seq1  ATGTCATTTAATTCATTTGTCTCTCTCTGAACACTACTTCTGAATAAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCATTTAATTCATTTGTCTCTCTCTGAACACTACTTCTGAATAAGTT  400

seq1  TACAAGTTATATGTAAATTAATTATTATTTTCCACCATGCATAAAAGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGTTATATGTAAATTAATTATTATTTTCCACCATGCATAAAAGTGT  450

seq1  ACATTGAAATAGGAAAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGA  500
      |||||||||||||||||||||||||||||||||  |||||||||||||||
seq2  ACATTGAAATAGGAAAAAGAAAGAAAGAAAGAA--AGAGAGAGAGAGAGA  498

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGA  548

seq1  AAGAAAGAAAGAAAGAAAGCAAGCCGATTGAGCAAATCATGAGGAGCAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGAAAGAAAGAAAGCAAGCCGATTGAGCAAATCATGAGGAGCAAG  598

seq1  CCAGTGAGCAGTACTCCCTGCAGCCCCTGGCCTCTATCAGCTTCTGTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGAGCAGTACTCCCTGCAGCCCCTGGCCTCTATCAGCTTCTGTCTC  648

seq1  TAGTTCACTGCTCTTTTCAAGTCCCTGCCCTGATTTTTTTTTTATGATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCACTGCTCTTTTCAAGTCCCTGCCCTGATTTTTTTTTTATGATAA  698

seq1  AATGTTGTATGGAAGTGTGCGTAAAAGATATCATCTTCATCATCAACAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTGTATGGAAGTGTGCGTAAAAGATATCATCTTCATCATCAACAAC  748

seq1  AATAAAAAATAAAAACCAAACACTAAGAACTTTTCCTCCCTATGCTGCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAAAATAAAAACCAAACACTAAGAACTTTTCCTCCCTATGCTGCTT  798

seq1  TTGGTGACCCTGTTCATCACAGCAGTAGAAACTCTAAGTTTAAAACAATG  850
      ||||||||||||||||||||||||||||||||||||||||||||   |||
seq2  TTGGTGACCCTGTTCATCACAGCAGTAGAAACTCTAAGTTTAAA--CATG  846

seq1  AAAAAAGGAAGACTATTTTATGATTTAGTTAAAATTCTGCTTTCATATAA  900
      |||||  | |||||||||||||| |||||| ||||||||| ||||||| |
seq2  AAAAA--GGAGACTATTTTATGA-TTAGTT-AAATTCTGC-TTCATAT-A  890

seq1  AATATTCAATTTAAGATATAATTGTAACTTCATGTGATATGTAACTTTTT  950
      |||||||||||| ||||||||||||||||||||||||||||||   ||||
seq2  AATATTCAATTT-AGATATAATTGTAACTTCATGTGATATGTA--CTTTT  937

seq1  TTTACCATAAACACTTTGATTTTATTTGTTTAATATATTTTAAATTTAAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TTTACCATAAACACTTTGATTTTATTTGTTTAATATATTTTAAATTT-AA  986

seq1  ATATTTTGACTTGATTTTAACAAAATTTAAAATTATTTACTTAAGTATAG  1050
      ||||||||||| |||||  |||||  || ||||||||||| |||||||||
seq2  ATATTTTGACTGGATTT--ACAAA--TTTAAATTATTTACCTAAGTATAG  1032

seq1  TGTCTAACCTTTTTTTCCTTCATTCAGCA  1079
       |||||||  |||||||| ||||||||||
seq2  GGTCTAACTCTTTTTTCC-TCATTCAGCA  1060