BAC Information

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BAC

Clone NameB6Ng01-061J07
Chromosome2 (Build37)
Map Location 57,420,090 - 57,530,272
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC227920, Nr4a2, LOC100041900, LOC100042910, Gpd2, LOC271788
Downstream geneGalnt5, A330104H05Rik, LOC667026, Pscdbp, LOC100042926, Acvr1c, LOC667062, Acvr1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-061J07.bB6Ng01-061J07.g
ACCDH882217DH882218
length920684
definitionDH882217|Mus musculus domesticus DNA, BAC clone: B6Ng01-061J07, 5' end.DH882218|Mus musculus domesticus DNA, BAC clone: B6Ng01-061J07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,529,352 - 57,530,272)(57,420,090 - 57,420,773)
sequence
gaattcactaaagaaagttactttgaaaagaccaaactgaaatgatattg
ggtataaaaactcaataagccaaataaaaccctcaacaaaagactgacta
gatcaagtagaaaacagtattgggtctgaaagactaagtcgaaggattga
atgactaaatacaatacatgccaatgataaattaataaaaacccagaaat
gaacctgagaggtttggaacaccatgatgacataaatgtttgacttatgg
ccagataaggtgaaggaggaagtgatggaagaagaaaggggagacaaagg
aaagagcatagaacacattctctgtaaaatatagcagaaaatgtccatgc
catttaataatttttcaggagcctcattctttcctcccactcttcctggg
gctccaaagacacatagtgaaaacacttttcattctgtcctacaaagaat
gatgttggtctctgattaaacagtaaagaagaattaagaaaacaatatat
atggagtgtaaaatttaattaattaattaattaattaattaattaaaaag
aaaacaatataaatcagagtccacggagttaagaacattagtacccttct
gagaggccatgaaattcaaatactaacatgaaaacacagcctgtggaaaa
atgacttaatatttatagcaactttttacagaggtttttgttttggtttg
gtttggttttttggttttttggtttttcgagacagggtttctctgtgtag
ccctgactgtcctggaactcactctgtagaccaggctggcctcgaactca
gaaatctacctgtctctgtctccaagtgctggaattaaaggtgtgtgcca
ccacgcctggctttacagaatatttttatattctctctctctctctctct
ctctctctctctctccctct
gaattcatttgattgagtttgattacggaacaaaatataattattttaga
tacatgatcagacttttctgaagatgtgtattggaggcaagcagcacttg
gcgaacgtgattgtttaccagttcaagagcatcaagtcagacaacggctg
ctaggaggatggtgtgggacttctagggaattgagctatcatgaaccact
tactcaaagtcaacaaaatgaaaggaaattccttaatttagagtagcaca
tggttagtctactggagtggggaaaagaccatcttcttctatcccaatat
tttggaatttagctttccaaataagaactctagtcagcttgccaaggcat
ctcatttacatcagaatctactaatgtcagacactggagaatgagtcaaa
caggaaaattgagaatcaacgggctaaataagaagtattagggaaaattt
tactagcgatgttcattttgaaccaaatacagttgccaatggaggaaggg
ggcaaatttctgagtgtggtggtgtatacttttaatcccagcacttggaa
ggcagaggaaggtgcatttctgaagtggagacagattttgtctacgtggc
aagtttcaggataactagagctacataatgtcactgtctcacaggaaaga
gagagaaacagaggggaggggggaagaagggaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_57529352_57530272
seq2: B6Ng01-061J07.b_47_966 (reverse)

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATATAAAAATA  50
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATATAAAAATA  50

seq1  TTCTGTAAAGCCAGGCGTGGTGGCACACACCTTTAATTCCAGCACTTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TTCTGTAAAGCCAGGCGTGGTGGCACACACCTTTAATTCCAGCACTT-GG  99

seq1  AGACAGAGACAGGTAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGAGACAGGTAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAG  149

seq1  TGAGTTCCAGGACAGTCAGGGCTACACAGAGAAACCCTGTCTCGAAAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTCCAGGACAGTCAGGGCTACACAGAGAAACCCTGTCTCGAAAAAC  199

seq1  CAAAAAACCAAAAAACCAAACCAAACCAAAACAAAAACCTCTGTAAAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAACCAAAAAACCAAACCAAACCAAAACAAAAACCTCTGTAAAAAG  249

seq1  TTGCTATAAATATTAAGTCATTTTTCCACAGGCTGTGTTTTCATGTTAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTATAAATATTAAGTCATTTTTCCACAGGCTGTGTTTTCATGTTAGT  299

seq1  ATTTGAATTTCATGGCCTCTCAGAAGGGTACTAATGTTCTTAACTCCGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAATTTCATGGCCTCTCAGAAGGGTACTAATGTTCTTAACTCCGTG  349

seq1  GACTCTGATTTATATTGTTTTCTTTTTAATTAATTAATTAATTAATTAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTGATTTATATTGTTTTCTTTTTAATTAATTAATTAATTAATTAAT  399

seq1  TAATTAAATTTTACACTCCATATATATTGTTTTCTTAATTCTTCTTTACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAAATTTTACACTCCATATATATTGTTTTCTTAATTCTTCTTTACT  449

seq1  GTTTAATCAGAGACCAACATCATTCTTTGTAGGACAGAATGAAAAGTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAATCAGAGACCAACATCATTCTTTGTAGGACAGAATGAAAAGTGTT  499

seq1  TTCACTATGTGTCTTTGGAGCCCCAGGAAGAGTGGGAGGAAAGAATGAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTATGTGTCTTTGGAGCCCCAGGAAGAGTGGGAGGAAAGAATGAGG  549

seq1  CTCCTGAAAAATTATTAAATGGCATGGACATTTTCTGCTATATTTTACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGAAAAATTATTAAATGGCATGGACATTTTCTGCTATATTTTACAG  599

seq1  AGAATGTGTTCTATGCTCTTTCCTTTGTCTCCCCTTTCTTCTTCCATCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGTGTTCTATGCTCTTTCCTTTGTCTCCCCTTTCTTCTTCCATCAC  649

seq1  TTCCTCCTTCACCTTATCTGGCCATAAGTCAAACATTTATGTCATCATGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCCTTCACCTTATCTGGCCATAAGTCAAACATTTATGTCATCATGG  699

seq1  TGTTCCAAACCTCTCAGGTTCATTTCTGGGTTTTTATTAATTTATCATTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCAAACCTCTCAGGTTCATTTCTGGGTTTTTATTAATTTATCATTG  749

seq1  GCATGTATTGTATTTAGTCATTCAATCCTTCGACTTAGTCTTTCAGACCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTATTGTATTTAGTCATTCAATCCTTCGACTTAGTCTTTCAGACCC  799

seq1  AATACTGTTTTCTACTTGATCTAGTCAGTCTTTTGTTGAGGGTTTTATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTGTTTTCTACTTGATCTAGTCAGTCTTTTGTTGAGGGTTTTATTT  849

seq1  GGCTTATTGAGTTTTTATACCCAATATCATTTCAGTTTGGTCTTTTCAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTATTGAGTTTTTATACCCAATATCATTTCAGTTTGGTCTTTTCAAA  899

seq1  GTAACTTTCTTTAGTGAATTC  921
      |||||||||||||||||||||
seq2  GTAACTTTCTTTAGTGAATTC  920

seq1: chr2_57420090_57420773
seq2: B6Ng01-061J07.g_70_753

seq1  GAATTCATTTGATTGAGTTTGATTACGGAACAAAATATAATTATTTTAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTGATTGAGTTTGATTACGGAACAAAATATAATTATTTTAGA  50

seq1  TACATGATCAGACTTTTCTGAAGATGTGTATTGGAGGCAAGCAGCACTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGATCAGACTTTTCTGAAGATGTGTATTGGAGGCAAGCAGCACTTG  100

seq1  GCGAACGTGATTGTTTACCAGTTCAAGAGCATCAAGTCAGACAACGGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAACGTGATTGTTTACCAGTTCAAGAGCATCAAGTCAGACAACGGCTG  150

seq1  CTAGGAGGATGGTGTGGGACTTCTAGGGAATTGAGCTATCATGAACCACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGAGGATGGTGTGGGACTTCTAGGGAATTGAGCTATCATGAACCACT  200

seq1  TACTCAAAGTCAACAAAATGAAAGGAAATTCCTTAATTTAGAGTAGCACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCAAAGTCAACAAAATGAAAGGAAATTCCTTAATTTAGAGTAGCACA  250

seq1  TGGTTAGTCTACTGGAGTGGGGAAAAGACCATCTTCTTCTATCCCAATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTAGTCTACTGGAGTGGGGAAAAGACCATCTTCTTCTATCCCAATAT  300

seq1  TTTGGAATTTAGCTTTCCAAATAAGAACTCTAGTCAGCTTGCCAAGGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAATTTAGCTTTCCAAATAAGAACTCTAGTCAGCTTGCCAAGGCAT  350

seq1  CTCATTTACATCAGAATCTACTAATGTCAGACACTGGAGAATGAGTCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTTACATCAGAATCTACTAATGTCAGACACTGGAGAATGAGTCAAA  400

seq1  CAGGAAAATTGAGAATCAACGGGCTAAATAAGAAGTATTAGGGAAAATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAAATTGAGAATCAACGGGCTAAATAAGAAGTATTAGGGAAAATTT  450

seq1  TACTAGCGATGTTCATTTTGAACCAAATACAGTTGCCAATGGAGGAAGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGCGATGTTCATTTTGAACCAAATACAGTTGCCAATGGAGGAAGGG  500

seq1  GGCAAATTTCTGAGTGTGGTGGTGTATACTTTTAATCCCAGCACTTGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAATTTCTGAGTGTGGTGGTGTATACTTTTAATCCCAGCACTTGGAA  550

seq1  GGCAGAGGAAGGTGCATTTCTGAAGTGGAGACAGATTTTGTCTACGTGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGGAAGGTGCATTTCTGAAGTGGAGACAGATTTTGTCTACGTGGC  600

seq1  AAGTTTCAGGATAACTAGAGCTACATAATGTCACTGTCTCACAGGAAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTCAGGATAACTAGAGCTACATAATGTCACTGTCTCACAGGAAAGA  650

seq1  GAGAGAAACAGAGGGGAGGGGGGAAGAAGGGAGA  684
      ||||||||||||||||||||||||||||||||||
seq2  GAGAGAAACAGAGGGGAGGGGGGAAGAAGGGAGA  684