MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-062K01
Chromosome	2 (Build37)
Map Location	160,938,717 - 160,939,231
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Gm826, Mafb, LOC100043892, Top1, Plcg1, Zhx3, Lpin3, Emilin3, Chd6, LOC100043693
Downstream gene	LOC100043694, LOC383769, LOC629655, LOC383770, Ptprt
Link	Open Mouse BAC browser

Click to get alignment info.

name	Gm826 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:329554 MGI:2685672
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mafb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16658 MGI:104555
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043892 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043892
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs

name	Top1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21969 MGI:98788
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Plcg1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18803 MGI:97615
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zhx3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320799 MGI:2444772
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lpin3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:64899 MGI:1891342
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Emilin3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:280635 MGI:2389142
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Chd6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71389 MGI:1918639
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043693 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043693
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100043694 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043694
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	LOC383769 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383769
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 23 Proteins pseudo : _no_value

name	LOC629655 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:629655
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 106 ESTs, 2 Proteins pseudo : _no_value

name	LOC383770 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383770
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 241 ESTs, 4 Proteins

name	Ptprt (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19281 MGI:1321152
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm826 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142352821 GeneID:329554 MGI:2685672
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 826, (NCBI) transcript_id : NM_001033411.2

name	Mafb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31543225 GeneID:16658 MGI:104555
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian) transcript_id : NM_010658.2

name	LOC100043892 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250238 GeneID:100043892
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs product : similar to putative novel gene transcript_id : XM_001481179.1

name	Top1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:112734854 GeneID:21969 MGI:98788
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : topoisomerase (DNA) I transcript_id : NM_009408.2

name	Plcg1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129851 GeneID:18803 MGI:97615
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phospholipase C, gamma 1 transcript_id : NM_021280.3

name	Zhx3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254320 GeneID:320799 MGI:2444772
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc fingers and homeoboxes 3 transcript_id : NM_177263.3

name	Lpin3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130395 GeneID:64899 MGI:1891342
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lipin 3 transcript_id : NM_022883.2

name	Emilin3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33469054 GeneID:280635 MGI:2389142
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : elastin microfibril interfacer 3 transcript_id : NM_182840.1

name	Chd6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:61742811 GeneID:71389 MGI:1918639
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chromodomain helicase DNA binding protein 6 transcript_id : NM_173368.2

name	LOC100043693 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250096 GeneID:100043693
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043693 transcript_id : XM_001480742.1

name	LOC100043694 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250098 GeneID:100043694
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : similar to CG31439-PA transcript_id : XM_001480744.1

name	LOC383770 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250241 GeneID:383770
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 241 ESTs, 4 Proteins product : similar to ribosomal protein transcript_id : XM_357236.5

name	Ptprt (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142371259 GeneID:19281 MGI:1321152
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein tyrosine phosphatase, receptor type, T transcript_id : NM_021464.2

name	Gm826 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701921 GeneID:329554 MGI:2685672
definition	codon_start : 1 product : hypothetical protein LOC329554 protein_id : NP_001028583.1

name	Mafb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23308601 CCDS:CCDS16994.1 GeneID:16658 MGI:104555
definition	GO_component : GO:0005634 - nucleus [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0042472 - inner ear morphogenesis [Evidence IMP]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0007585 - respiratory gaseous exchange [Evidence IMP]; GO:0007379 - segment specification [Evidence IMP]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : Kreisler (maf-related) leucine zipper protein product : v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B protein_id : NP_034788.1

name	LOC100043892 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250239 GeneID:100043892
definition	codon_start : 1 product : similar to putative novel gene protein_id : XP_001481229.1

name	Top1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:112734855 CCDS:CCDS16995.1 GeneID:21969 MGI:98788
definition	GO_component : GO:0005694 - chromosome [Evidence IEA]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] [Evidence ISS]; GO:0043204 - perikaryon [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003918 - DNA topoisomerase (ATP-hydrolyzing) activity [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003917 - DNA topoisomerase type I activity [Evidence IDA]; GO:0016853 - isomerase activity [Evidence IEA] GO_process : GO:0006260 - DNA replication [Evidence IMP]; GO:0006265 - DNA topological change [Evidence IDA]; GO:0006268 - DNA unwinding during replication [Evidence IEA]; GO:0040016 - embryonic cleavage [Evidence IMP] codon_start : 1 product : topoisomerase (DNA) I protein_id : NP_033434.2

name	Plcg1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:41393059 CCDS:CCDS16996.1 GeneID:18803 MGI:97615
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004435 - phosphoinositide phospholipase C activity [Evidence IEA]; GO:0004629 - phospholipase C activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0001701 - embryonic development (sensu Mammalia) [Evidence IMP]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0016042 - lipid catabolism [Evidence IEA]; GO:0006629 - lipid metabolism [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; cell differentiation and embryonic development product : phospholipase C, gamma 1 protein_id : NP_067255.2

name	Zhx3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254321 CCDS:CCDS16997.1 GeneID:320799 MGI:2444772
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence ISS] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] [Evidence IPI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0045892 - negative regulation of transcription, DNA-dependent [Evidence ISS]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : triple homeobox 1 product : zinc fingers and homeoboxes 3 protein_id : NP_796237.2

name	Lpin3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12584972 CCDS:CCDS16998.1 GeneID:64899 MGI:1891342
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : lipin 3 protein_id : NP_075021.1

name	Emilin3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33469055 CCDS:CCDS16999.1 GeneID:280635 MGI:2389142
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] codon_start : 1 note : elastin microfibril interface located protein 3; elastin microfibril interface located protein 5 product : elastin microfibril interfacer 3 protein_id : NP_878260.1

name	Chd6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61742812 CCDS:CCDS17000.1 GeneID:71389 MGI:1918639
definition	GO_function : GO:0004386 - helicase activity [Evidence IEA] codon_start : 1 product : chromodomain helicase DNA binding protein 6 protein_id : NP_775544.2

name	LOC100043693 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250097 GeneID:100043693
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480792.1

name	LOC100043694 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250099 GeneID:100043694
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480794.1

name	LOC383770 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250242 GeneID:383770
definition	codon_start : 1 product : similar to ribosomal protein protein_id : XP_357236.3

name	Ptprt (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946856 CCDS:CCDS17001.1 GeneID:19281 MGI:1321152
definition	GO_component : GO:0005886 - plasma membrane [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004725 - protein tyrosine phosphatase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007185 - transmembrane receptor protein tyrosine phosphatase signaling pathway [Evidence IEA] codon_start : 1 note : receptor protein tyrosine phosphatase-rho product : protein tyrosine phosphatase, receptor type, T protein_id : NP_067439.1

name	LOC383769 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383769
definition	number : 1 pseudo : _no_value

name	LOC629655 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250240 GeneID:629655
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 106 ESTs, 2 Proteins product : similar to M phase phosphoprotein 6 pseudo : _no_value transcript_id : XR_035034.1

clone name	MSMg01-297M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-152F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-097O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-093N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-066C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-171C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-206E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-293E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102A12
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-062K01.b	B6Ng01-062K01.g
ACC	DH882965	DH882966
length	1,040	509
definition	DH882965\|Mus musculus domesticus DNA, BAC clone: B6Ng01-062K01, 5' end.	DH882966\|Mus musculus domesticus DNA, BAC clone: B6Ng01-062K01, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctgggcattgagagaccagtgcagagccattgctgagccccactg actcaagagtttcatggggcagggtagaaggcgccctgggggtggtgtct ctgccatatagctttattttgttttgttacattttacaactttatggaag acagtcatatgtcatacatttcatatatttaaactacatgagtcaaaata ctttaagattttcacagacttgtgtaactgtgattatgaccaataataga atacaatatcccttatatctggaacagtctggtcccaggatacccatgga gactaaactccaaagatgctcaagtttcttataaaacataatatttatac atagagttgctctcatcttctcatccactgtaagtcatgtctcaattcta tactgtgatgtaaatgctatgcaaatagttgttaaattgtgctctttgtg gaaaaatgacaagcaaaaaaaaaagagtgcatattcagtgcagatgactt ttaagaatattttcaagaggaatggtagatacagatagctacctctttca ttaccttgaaaaaaaaccaagtatccttcaggttttagtgtccctacaac attgccatcaatagtcaatactaaggcaaccattaatccacttcttgtct ctgcagatttgcttattctgagcatttcctatcaatggagtcaccttttc atttaacataatgctttcacgatttctacatgctgtaacatatatccata tttgattaaatgggggggggggataatattcaactgtattttatatacca gattttgtttagccatttgtgagctagtgggcagtgggggttctctcttc attttgactgatattgatatgaatatatatatagccctgctatgaacatt cacaataaaggagattttttgatggatgtttttgttcattgggatgtact taaatgagttcttaattcatatgatacctgttactaactgttccgagtgt cgaatgctttacaacatgctggactatttgatgttgcaca	ttggtccttccaggacagagattgtttgtcactcaagcacaggtgcggtg tcttacagatagaaggcatagctccaagtatgaatgagtgtgttgagctg atgtctgagtctggtctgaaaggctcggtgatcatatcggaggcaagata acaggcaggaaatgctccaggaagggtgtccggtggaaaggtcagggaaa atatgtttcactctcagctctgacaaggtccatggcataagagggggaga ctagtccgagtgaggctagagagagagagagcacagactaaattgaaaag ggaagcctagtgaggggtggatgggataaaaataaatattatatatgtat gaagttgtagaaaatatatttaaagggggaaaattaagttccccatgata atacaccatgattaaaagcaacttgtagaggaaagggtttatttcagctt atagtttatagtccatcatggagggaagtcagggtagaaactcaaggcag gaatctgga
quality values	Open. Hide. 47 41 27 25 61 47 33 61 61 61 52 35 47 61 61 61 61 61 61 47 32 38 38 61 61 55 52 30 21 55 49 52 49 49 55 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 61 61 61 61 61 61 61 61 61 59 61 59 61 59 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 44 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 55 61 55 61 55 55 61 61 55 55 55 50 55 55 61 61 55 61 61 61 61 61 61 61 61 61 61 55 61 55 55 61 61 61 55 55 55 55 55 55 61 53 43 61 61 61 61 61 61 61 61 61 53 50 50 50 53 52 61 47 61 61 53 61 61 61 53 61 50 61 61 53 61 61 61 61 61 61 61 53 52 53 53 53 52 53 47 61 50 61 53 61 61 53 61 61 61 61 61 61 23 39 61 61 61 50 53 61 61 61 53 53 53 53 47 46 50 39 61 39 47 53 47 53 53 36 42 52 42 38 53 47 53 26 47 34 43 53 52 38 53 47 53 53 50 38 53 50 57 57 53 35 53 52 40 45 53 52 57 57 47 45 35 47 57 40 35 57 45 43 47 50 53 46 57 50 53 57 57 42 45 50 43 57 26 57 47 42 38 45 50 42 43 52 53 53 53 32 53 52 50 42 53 52 45 50 53 47 22 22 45 45 52 33 33 37 52 27 36 23 53 46 37 50 57 57 57 57 57 57 57 57 57 40 50 16 34 45 38 40 39 35 50 25 29 24 42 44 33 38 42 29 41 38 23 52 26 18 17 37 34 20 15 32 28 46 57 27 34 34 46 53 27 26 22 26 19 32 37 37 52 37 30 25 9 35 36 18 8 28 52 39 37 27 29 21 9 37 44 44 45 43 9 43 29 37 31 28 36 29 21 28 19 25 37 29 14 7 23 33 29 31 30 14 19 9 23 13 28 19 23 30 26 30 27 31 19 18 27 32 33 30 29 23 28 9 11 45 30 31 31 13 20 24 34 35 31 18 17 18 14 28 30 28 15 5 10 16 11 22 9 8 15 29 21 30 27 37 30 30 29 23 8 26 6 20 19 26 24 29 10 38 33 31 29 9 5 18 12 5 10 22 29 24 14 8 10 28 12 12 28 9 11 20 7 10 10 11 6 10 35 27 14 14 12 7 6 4 6 14 18 8 14 7 5 26 13 23 6 20 12 25 6 7 10 20 21 11 9 20 12 13 11 23 12 10 5 6 4 4 12 13 15 7 12 30 9 11 24 16 51 39 9 17 10 16 12 6 7 5 7 5 10 5 5 10 5 12 22 38 16 18 23 14 12 8 5 10 7 5 7 5	Open. Hide. 43 35 30 28 35 36 50 49 52 61 59 25 59 61 59 61 61 61 61 61 44 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 61 59 59 61 61 59 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 59 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 59 55 59 59 61 61 61 59 59 59 59 59 49 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 55 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 59 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 59 61 61 61 61 61 55 55 52 52 41 27 31 36 27 34 41 50 52 52 49 47 30 41 55 55 55 52 55 55 55 55 52 55 61 47 61 61 55 61 55 52 52 52 34 34 50 50 50 55 49 55 25 50 43 50 50 43 50 35 55 61 47 55 55 61 61 55 35 37 27 18 37 31 32 55 50 49 36 50 37 30 18 35 26 26 37 43 34 31 43 43 43 50 50 50 47 35 50 50 50 50 35 24 21 10 9 32 21 29 29 27 28 32 32 32 38 20 19 15 8 15 6 5 5 14 26 13 14 10 8 12 10 8

Alignment Information

BAC End 1

BAC End 2

seq1: chr2_160938717_160939231
seq2: B6Ng01-062K01.g_67_581

seq1  GAATTCTTGGTCCTTCCAGGACAGAGATTGTTTGTCACTCAAGCACAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGGTCCTTCCAGGACAGAGATTGTTTGTCACTCAAGCACAGGT  50

seq1  GCGGTGTCTTACAGATAGAAGGCATAGCTCCAAGTATGAATGAGTGTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGTGTCTTACAGATAGAAGGCATAGCTCCAAGTATGAATGAGTGTGTT  100

seq1  GAGCTGATGTCTGAGTCTGGTCTGAAAGGCTCGGTGATCATATCGGAGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGATGTCTGAGTCTGGTCTGAAAGGCTCGGTGATCATATCGGAGGC  150

seq1  AAGATAACAGGCAGGAAATGCTCCAGGAAGGGTGTCCGGTGGAAAGGTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAACAGGCAGGAAATGCTCCAGGAAGGGTGTCCGGTGGAAAGGTCA  200

seq1  GGGAAAATATGTTTCACTCTCAGCTCTGACAAGGTCCATGGCATAAGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAATATGTTTCACTCTCAGCTCTGACAAGGTCCATGGCATAAGAGG  250

seq1  GGGAGACTAGTCCGAGTGAGGCTAGAGAGAGAGAGAGCACAGACTAAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGACTAGTCCGAGTGAGGCTAGAGAGAGAGAGAGCACAGACTAAATT  300

seq1  GAAAAGGGAAGCCTAGTGAGGGGTGGATGGGATAAAAATAAATATTATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGGGAAGCCTAGTGAGGGGTGGATGGGATAAAAATAAATATTATAT  350

seq1  ATGTATGAAGTTGTAGAAAATATATTTAAAGGGGGAAAATTAAGTTCCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATGAAGTTGTAGAAAATATATTTAAAGGGGGAAAATTAAGTTCCCC  400

seq1  ATGATAATACACCATGATTAAAAGCAACTTGTAGAGGAAAGGGTTTATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATAATACACCATGATTAAAAGCAACTTGTAGAGGAAAGGGTTTATTT  450

seq1  CAGCTTATAGTTTATAGTCCATCATGGAGGGAAGTCAGGGTAGAAACTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTATAGTTTATAGTCCATCATGGAGGGAAGTCAGGGTAGAAACTCA  500

seq1  AGGCAGGAATCTGGA  515
      |||||||||||||||
seq2  AGGCAGGAATCTGGA  515

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information