BAC Information

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BAC

Clone NameB6Ng01-062K06
Chromosome2 (Build37)
Map Location 110,939,619 - 110,940,798
singlet/doubletsinglet
Overlap geneLOC668802
Upstream geneLOC668797, Bbox1, 1110018M03Rik, LOC668799, Slc5a12, Muc15
Downstream geneLOC623270, LOC623301, 4930430A15Rik, Olfr1275, Olfr1276, Olfr1277, Olfr1278, Olfr1279, Olfr1280, Olfr1281, Olfr1282, Olfr1283, Olfr1284, LOC100043465, Olfr1285, Olfr1286, Olfr1287, Olfr1288, Olfr1289, Olfr1290, GA_x5J8B7W4T2P-95628-96096, Olfr1292-ps1, Olfr1293, Olfr1294, Olfr1295, LOC668822, Olfr1297, Olfr1298, Olfr1299, Olfr1300-ps1, Olfr1301, Olfr1302, Olfr1303, Olfr249-ps1, LOC668825, Olfr1305, Olfr1306, LOC668827, Olfr1307, Olfr1308, Olfr1309, LOC433463, Olfr1310, Olfr1311, Olfr1312, Olfr1313, Olfr1314
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-062K06.bB6Ng01-062K06.g
ACCDH882975DH882976
length1,167667
definitionDH882975|Mus musculus domesticus DNA, BAC clone: B6Ng01-062K06, 5' end.DH882976|Mus musculus domesticus DNA, BAC clone: B6Ng01-062K06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagaaagatgaatcagtaaactaaataattgtggaacagggaaa
tacgtgaagagagattactctgctgagtcaattatgcctgaattagactc
acattttttaaaataatattttcattcttttgttcatataaaggtgtaga
gtaaatttacttaggaaagacatcaatgtgtgtatcaaggtatagatttg
tgtttgttagaggcaagattgtctgtatctgtgtgtgtgtaagatataag
gggactggaagagaggtatgaagaccaaaggaggggtgatgatagaaaat
attttaagtgtgacaataaaatcacaaagagtggcaatctatagagcacc
tggactagcataaacagagggaaaaagataaggctagtgagtagggaaat
aaaaagaatatataagactatatatgtatggagctgccttaatgacagtt
ccacattatatatataacattttgaaagaataaattaaaagtgaaaaatt
tagcaaaacacacacaataaacacacacataataaatatacacatataat
aaatatacatactatatataatatttgtaaataacttagaaaattattgc
attgaaagtttcaagttcctttttcaaatctaaaatctatctaaatttga
gggagagaatgaataccaatgataagaagaaaaatgatatgcctgatacc
aattagatgtgtatatagaattgaagcaaattgaaattcagggaattttc
aaataatatatcaatcaaaattatcactggacagtacaaaatataatctg
ttcatcgcttgatataactacctgcatactataattttgttcttcacttc
taattttttattcaaaattttagttttgaaattccccaaacagaagtatt
ttaccatgtacttgtcatgcaaatctttttgaccaacaacccaaagtggt
actaacgtccatgagctgtataataaattaccattgaatacatcttaacc
ctcactaaacatttgagaagcagctattgggctattaaaatatatggctc
acctgatttaataaacaatatttcaatgacttattgatgaccataagtct
acttctcctgctaggagattgtgactctggactattctgttgaagaatga
ggaattgcctggatgga
gaattctctcagaccttcaaagaagacgtattatcaatactctttggaac
aagaagggggaacaaaatattcaaaagagaaaatacagagacataatgtg
gaatagagagtgaaggaaaggtcatccagagactgcccaatatagggatc
catccaatatacagtcaccaacacaggcactattgtggatgccaagaact
gcttacttacaagaacctgatatagctgtctcctgggaggctatgccaga
ttctgacgaatacagaggtgatgctcacagtcaatcgttggactgagcac
agggtctccaatggaggtgttagagaaaggactgaaggagatgaaggggt
ttgcaaccccataggaagaacaacaatatccaccaatcagacccgacaga
gctcccagtaactaaactacccaccaaagagtacacatggagggacccat
gactctagacacatgtgtagcagaggatgatggccttatcaggcatcagt
gggaagagaggcccttggttctgtgaaggcttgatgccccagtgtaggga
aattccagggcagggaggtgggagtggttgggtggaggaactttctcata
aaagcagaaagataggggatgggttaggggattttgggtggtatctctgg
aaaggaatttgaaatgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_110939619_110940798
seq2: B6Ng01-062K06.b_39_1205

seq1  GAATTCCAGAAAGATGAATCAGTAAACTAAATAATTGTGGAACAGGGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAAAGATGAATCAGTAAACTAAATAATTGTGGAACAGGGAAA  50

seq1  TACGTGAAGAGAGATTACTCTGCTGAGTCAATTATGCCTGAATTAGACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGTGAAGAGAGATTACTCTGCTGAGTCAATTATGCCTGAATTAGACTC  100

seq1  ACATTTTTTAAAATAATATTTTCATTCTTTTGTTCATATAAAGGTGTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTTTAAAATAATATTTTCATTCTTTTGTTCATATAAAGGTGTAGA  150

seq1  GTAAATTTACTTAGGAAAGACATCAATGTGTGTATCAAGGTATAGATTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATTTACTTAGGAAAGACATCAATGTGTGTATCAAGGTATAGATTTG  200

seq1  TGTTTGTTAGAGGCAAGATTGTCTGTATCTGTGTGTGTGTAAGATATAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTTAGAGGCAAGATTGTCTGTATCTGTGTGTGTGTAAGATATAAG  250

seq1  GGGACTGGAAGAGAGGTATGAAGACCAAAGGAGGGGTGATGATAGAAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTGGAAGAGAGGTATGAAGACCAAAGGAGGGGTGATGATAGAAAAT  300

seq1  ATTTTAAGTGTGACAATAAAATCACAAAGAGTGGCAATCTATAGAGCACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAGTGTGACAATAAAATCACAAAGAGTGGCAATCTATAGAGCACC  350

seq1  TGGACTAGCATAAACAGAGGGAAAAAGATAAGGCTAGTGAGTAGGGAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTAGCATAAACAGAGGGAAAAAGATAAGGCTAGTGAGTAGGGAAAT  400

seq1  AAAAAGAATATATAAGACTATATATGTATGGAGCTGCCTTAATGACAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAATATATAAGACTATATATGTATGGAGCTGCCTTAATGACAGTT  450

seq1  CCACATTATATATATAACATTTTGAAAGAATAAATTAAAAGTGAAAAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATTATATATATAACATTTTGAAAGAATAAATTAAAAGTGAAAAATT  500

seq1  TAGCAAAACACACACAATAAACACACACATAATAAATATACACATATAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAAACACACACAATAAACACACACATAATAAATATACACATATAAT  550

seq1  AAATATACATACTATATATAATATTTGTAAATAACTTAGAAAATTATTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATACATACTATATATAATATTTGTAAATAACTTAGAAAATTATTGC  600

seq1  ATTGAAAGTTTCAAGTTCCTTTTTCAAATCTAAAATCTATCTAAATTTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAAGTTTCAAGTTCCTTTTTCAAATCTAAAATCTATCTAAATTTGA  650

seq1  GGGAGAGAATGAATACCAATGATAAGAAGAAAAATGATATGCCTGATACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAGAATGAATACCAATGATAAGAAGAAAAATGATATGCCTGATACC  700

seq1  AATTAGATGTGTATATAGAATTGAAGCAAATTGAAATTCAGGGAATTTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGATGTGTATATAGAATTGAAGCAAATTGAAATTCAGGGAATTTTC  750

seq1  AAATAATATATCAATCAAAATTATCACTGGACAGTACAAAATATAATCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATATATCAATCAAAATTATCACTGGACAGTACAAAATATAATCTG  800

seq1  TTCATCGCTTGATATAACTACCTGCATACTATAATTTTGTTCTTCACTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCGCTTGATATAACTACCTGCATACTATAATTTTGTTCTTCACTTC  850

seq1  TAATTTTTTATTCAAAATTTTAGTTTTGAAATTCCCCAAACAGAAGTATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTTTATTCAAAATTTTAGTTTTGAAATTCCCCAAACAGAAGTATT  900

seq1  TTACCATGTACTTGTCATGCAAATCTTTTTGACCAACAACCCAAAGTGGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCATGTACTTGTCATGCAAATCTTTTTGACCAACAACCCAAAGTGGT  950

seq1  ACTAACGTCCATGAGCTGTATAATAAATTACCATTGAATACATCTTAACC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACGTCCATGAGCTGTATAATAAATTACCATTGAATACATCTTAACC  1000

seq1  CTCACTAAACATTTGAGAAGCAGCTATTGGGCTATTAAAATATATGGCTC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTAAACATTTGAGAAGCAGCTATTGGGCTATTAAAATATATGGCTC  1050

seq1  ACCTGATTTTAATAAACAATATTTCAAATGACTTATTGATGACACATAAG  1100
      |||||| |||||||||||||||||| ||||||||||||||||| ||||||
seq2  ACCTGA-TTTAATAAACAATATTTC-AATGACTTATTGATGAC-CATAAG  1097

seq1  TCTTACCTTCTCCTGCCTTAGGAGGATTTGTGACTCTTGTACTTATTCCT  1150
      |||   ||||||||||  ||||||   ||||||||| || || |||| ||
seq2  TCT--ACTTCTCCTGC--TAGGAG--ATTGTGACTC-TGGAC-TATT-CT  1138

seq1  GTTGATGAATGAGGAATATGCCTGGATGGA  1180
      ||||| ||||||||||| ||||||||||||
seq2  GTTGAAGAATGAGGAAT-TGCCTGGATGGA  1167