BAC Information

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BAC

Clone NameB6Ng01-062O12
Chromosome2 (Build37)
Map Location 118,870,707 - 118,871,637
singlet/doubletsinglet
Overlap genenone
Upstream geneThbs1, Fsip1, Gpr176, 1700054M17Rik, Eif2ak4, Srp14, LOC668859, Bmf, LOC640461, Bub1b, Pak6, Gm1337, Plcb2, LOC100043272, A430105I19Rik, Disp2, D2Ertd750e, Ivd, Bahd1, Chst14, LOC677379, Ccdc32, Rpusd2
Downstream geneCasc5, Rad51, 1200015F23Rik, Gchfr, Dnajc17, OTTMUSG00000015762, LOC545640, Zfyve19, Ppp1r14d, Spint1, Rhov, Vps18, LOC100043609, Dll4, Chac1, Inoc1, LOC100043612, Exdl1, 1500003O03Rik, LOC100043307, Oip5, Nusap1, Ndufaf1, LOC625328, LOC100043622, Rtf1, Itpka, Ltk, Rpap1, Tyro3, 6330405D24Rik, LOC625403, Mga, Mapkbp1, Pla2g4b, Spnb5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-062O12.bB6Ng01-062O12.g
ACCDH883159DH883160
length930568
definitionDH883159|Mus musculus domesticus DNA, BAC clone: B6Ng01-062O12, 5' end.DH883160|Mus musculus domesticus DNA, BAC clone: B6Ng01-062O12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaaagcagtcagagtaatataaaatacacgatttcaatcagagg
caaagtcacaggcaatatcactgaagctcattgccttatttaaaagtgtt
tttgatgagagattatgaaaatgattgtcgctgcccactcttcacccaca
aaaaattggctactaaattgtctgcaaggcccctgaagggatgtatgtcc
caccaggacagaaaacggacagtaagacatggctgaagagaactggccaa
aagtgcccagactgtgaaggtagcaacattcccaagggatttggacctaa
aatggaggaaccaggagagaggcgtctgactgccttccaatcatcagtgc
cacaaatcttgctgaagcacctgcccctggtgctgggctcttgaacactg
agcatgcccagtgagaggaatgtaaaatcaccactccaggggatcattaa
gaactcttcatgatctggtaccatacaggatgagggttaaacatcatgga
gtcaatagatgtgggttacactgtcctgtctgcaacttagaagctgtata
gccttggacaaattaatctttcagtgtaaaacaacaataatagaatatga
agacatctatcatgatcacagggttctgcagagtcggagacacataatcc
atgtaaaatgtatgttgcttttagttatgtaaaaaacattaagggttttt
aagtgtgagttgaatgaatttgtctgatgatgttacaggaggaaaatctc
tgttcttttttctattcctaatcctttggttaaatccagaagattcagct
ttttgtcttttgaaaaggtagtcgtgttcctcttcttcagtagtttctgg
atcatagcaagatttcaaatgtcatgggcatttttgtttgtttgtttgtt
ttgttttgggagttttgttttggggtgggg
attttctcctcccactgtggaatctggggatcaaccagaagtgatcagcc
tgtggcaagtgcctttatctgctgagccctcccaccccacccccaagata
tggtctcattgtatagcattggctaacctagaattcattatgtagagtag
gttggatttgaatacagagagatcagcctggctctgccttctgaatgctg
gggtcaactgtgtgtgctgccaaaactgaccttggcttgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtaagtgtgtgtgtgtgctg
gtacttgccatgtagcccaagctaacttaaagctttcaccagttcttctg
cctcaccttcctaagagctgagaccaagtgtgtgctctcactatgaaaat
aatctagtgcttatcacttactcttgcctctaggcatcaagattttgaga
agatggtttgtttatttgtttacttattgtaggcttatatttttttcaaa
acctactttaataagggttcttaaacccttcaacctcccctatagcctcg
ccaaccaagtctagggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_118870707_118871637
seq2: B6Ng01-062O12.b_51_980

seq1  GAATTCTAAAGCAGTCAGAGTAATATAAAATACACGATTTCAATCAGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAAGCAGTCAGAGTAATATAAAATACACGATTTCAATCAGAGG  50

seq1  CAAAGTCACAGGCAATATCACTGAAGCTCATTGCCTTATTTAAAAGTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTCACAGGCAATATCACTGAAGCTCATTGCCTTATTTAAAAGTGTT  100

seq1  TTTGATGAGAGATTATGAAAATGATTGTCGCTGCCCACTCTTCACCCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATGAGAGATTATGAAAATGATTGTCGCTGCCCACTCTTCACCCACA  150

seq1  AAAAATTGGCTACTAAATTGTCTGCAAGGCCCCTGAAGGGATGTATGTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTGGCTACTAAATTGTCTGCAAGGCCCCTGAAGGGATGTATGTCC  200

seq1  CACCAGGACAGAAAACGGACAGTAAGACATGGCTGAAGAGAACTGGCCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGGACAGAAAACGGACAGTAAGACATGGCTGAAGAGAACTGGCCAA  250

seq1  AAGTGCCCAGACTGTGAAGGTAGCAACATTCCCAAGGGATTTGGACCTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCCCAGACTGTGAAGGTAGCAACATTCCCAAGGGATTTGGACCTAA  300

seq1  AATGGAGGAACCAGGAGAGAGGCGTCTGACTGCCTTCCAATCATCAGTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAGGAACCAGGAGAGAGGCGTCTGACTGCCTTCCAATCATCAGTGC  350

seq1  CACAAATCTTGCTGAAGCACCTGCCCCTGGTGCTGGGCTCTTGAACACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAATCTTGCTGAAGCACCTGCCCCTGGTGCTGGGCTCTTGAACACTG  400

seq1  AGCATGCCCAGTGAGAGGAATGTAAAATCACCACTCCAGGGGATCATTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGCCCAGTGAGAGGAATGTAAAATCACCACTCCAGGGGATCATTAA  450

seq1  GAACTCTTCATGATCTGGTACCATACAGGATGAGGGTTAAACATCATGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCTTCATGATCTGGTACCATACAGGATGAGGGTTAAACATCATGGA  500

seq1  GTCAATAGATGTGGGTTACACTGTCCTGTCTGCAACTTAGAAGCTGTATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATAGATGTGGGTTACACTGTCCTGTCTGCAACTTAGAAGCTGTATA  550

seq1  GCCTTGGACAAATTAATCTTTCAGTGTAAAACAACAATAATAGAATATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGGACAAATTAATCTTTCAGTGTAAAACAACAATAATAGAATATGA  600

seq1  AGACATCTATCATGATCACAGGGTTCTGCAGAGTCGGAGACACATAATCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATCTATCATGATCACAGGGTTCTGCAGAGTCGGAGACACATAATCC  650

seq1  ATGTAAAATGTATGTTGCTTTTAGTTATGTAAAAAACATTAAGGGTTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAAATGTATGTTGCTTTTAGTTATGTAAAAAACATTAAGGGTTTTT  700

seq1  AAGTGTGAGTTGAATGAATTTGTCTGATGATGTTACAGGAGGAAAATCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTGAGTTGAATGAATTTGTCTGATGATGTTACAGGAGGAAAATCTC  750

seq1  TGTTCTTTTTTCTATTCCTAATCCTTTGGTTAAATCCAGAAGATTCAGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTTTTTCTATTCCTAATCCTTTGGTTAAATCCAGAAGATTCAGCT  800

seq1  TTTTGTCTTTTGAAAAGGTAGTCGTGTTCCTCTTCTTCAGTAGTTTCTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCTTTTGAAAAGGTAGTCGTGTTCCTCTTCTTCAGTAGTTTCTGG  850

seq1  ATCATAGCAAGATTTCAAATGTCATGGGCATTTTTGTTTGTTTGTTTGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATAGCAAGATTTCAAATGTCATGGGCATTTTTGTTTGTTTGTTTGTT  900

seq1  TTGTTTTTGGGAGTTTTGTTTTGGGGTGGGG  931
      ||| |||||||||||||||||||||||||||
seq2  TTG-TTTTGGGAGTTTTGTTTTGGGGTGGGG  930