BAC Information

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BAC

Clone NameB6Ng01-063H14
Chromosome2 (Build37)4 (Build37)
Map Location 142,776,676 - 142,777,22077,921,160 - 77,922,273
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-063H14.bB6Ng01-063H14.g
ACCDH883556DH883557
length9311,104
definitionDH883556|Mus musculus domesticus DNA, BAC clone: B6Ng01-063H14, 5' end.DH883557|Mus musculus domesticus DNA, BAC clone: B6Ng01-063H14, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(142,776,676 - 142,777,220)(77,921,160 - 77,922,273)
sequence
gaattctttgtttagctctgagcctcattttttaatggggttatttgatt
ttctggagtccaccttcttgaattctttatatatattaaatattagtccc
atatctaatttaggataggtaaagatcctttcccagtcaggcggtggact
ttttgccttatcaatgatgtcctttgcctgaaagaagctttgcaatttta
tgaggtcccattcgtcaattctcaatcttacagcacaagccattgctgtt
ctattcgggaatttttcccctgtgccaatgtttttgaggcttgtctctac
tttctcctttataagttccagtgtctctggttttatggggagttccttga
tccacttagatttgaccttagtacaaggagataggaatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccatttgttgaaaat
gctgtctttttttccactggatggttttagctcccttgtcaaagatcaag
tgaccataggtgtgtgggttcatttctgggtcttcaattctattccattg
gtctacttgtctgttttgctataccagtaccatgcagtttttttacatca
caattattctgttgtacagctttaggtcaggcatagtgatttcaccagag
gttcttttatccttgagaagaggttttgctctcctaggtgttttgttatt
ccagatgaatttgcagattgctctttctaatttgttgaagaattgagttg
gaattttgatgggaattgaattgaatctgtaggttgcttttggcaggata
gccatttttactatattgatcctgccatccatgagcatgagagatctttc
aatcttctgagatattctttaatttctttcttcaaagacttgaagttctt
ttcatacagatctttcacttccttagttaga
gaattcactgtgatttttctttagaagtgccctttgatcttcaagcttga
gtgaattgatagatgagattggttttatactgaatatgaaaggacatttt
cactaaaatattttggacacaagagaattttaatcaaattctaaaaataa
tagatataaaggaagcttgaggttgagttaagcgtactaaggaagaggtg
ttgagaagaaaaatagccgaggatgcagagtaggcatattggtgacatgc
aaatagcacagtgagctgtcaggggtgcatagcctcacacctgagggaat
ggctgtgctgatcatacacatggatgaacacgtgcaaacagctcagatag
aaggggaaaatgagaatccaaaaacaaaataggaatcagtcatcagtgag
tgccttaggtgggactgtaataaggacaatacagcaaatgggaacagaag
cagctgtagggaagacgaaattcagtactggcttggccacgaaactgagt
acagctccaggaataaaaattgtgttgagtgaattcttaaggaagttaaa
ataacccatccacatagttgctgtacagagggctcttcaagttctgggtt
gtattttgatttgggtgtgtgttgaattgaaatatgcataatacacaact
actggtgattagattttaaaaggaatgtaccttcacacttgttatgtttt
gaatctttgggcccacataaaattcttatattgaaatgtaaacacccatc
atgatgttattaaatattaaatcctgggagaggttgatttttttcatgaa
gtttcttcccaccttaatgggcataagtcccctaagaaagaaagcaaggg
aaagggtgattacctcattttgaggagcacataggacacagaccttgaca
tttgccttaaactctctagacttgctgggaaacaactacaacttctctct
tgtcaatgggtatttttttagtatatttgagtcaaatgagttatgaatag
gagaattatactgcagttaagatgcttgtagctgcagttatcataagtat
ttatcaccaatctttcattgcctcttaattaggatagaatctccagtata
tata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776676_142777220
seq2: B6Ng01-063H14.b_65_610 (reverse)

seq1  ACAGACAAGTAGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACAAGTAGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCA  50

seq1  CACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGAG  100
      ||||||||||||||||||||||| |||||||||||||||||||||||| |
seq2  CACACCTATGGTCACTTGATCTTTGACAAGGGAGCTAAAACCATCCAGTG  100

seq1  G-AAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTA  149
      | || |||||||||||||||||||| ||||||||||||||||||||||||
seq2  GAAAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGTTGTTA  150

seq1  TCATGTAGAAGAATGGGAATCGATCCATACTTATCTCCTTGTACTAAGGT  199
      ||||||||||||||| |||||||||||| | |||||||||||||||||||
seq2  TCATGTAGAAGAATGCGAATCGATCCATTCCTATCTCCTTGTACTAAGGT  200

seq1  CAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAAC  249
      |||||||||||||||||||||||| | ||||||||||||||||||| |||
seq2  CAAATCTAAGTGGATCAAGGAACTCCCCATAAAACCAGAGACACTGGAAC  250

seq1  TTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGAC  299
      ||||| |||||||||| | || ||||||  || | || ||||||||||| 
seq2  TTATAAAGGAGAAAGTAGAGACAAGCCTCAAAAACATTGGCACAGGGGAA  300

seq1  AAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTGA  349
      ||||||| ||| |||||||||||||||||||||||||||| |||||||||
seq2  AAATTCCCGAATAGAACAGCAATGGCTTGTGCTGTAAGATTGAGAATTGA  350

seq1  CAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCG  399
      | |||||||||| || ||| | ||||| ||||   ||||||| |||| | 
seq2  CGAATGGGACCTCATAAAATTGCAAAGCTTCTTTCAGGCAAAGGACATCA  400

seq1  TCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTACCTAT  449
      |  ||||| ||||||| |||||  | || |||||||||||||||||||||
seq2  TTGATAAGGCAAAAAGTCCACCGCCTGACTGGGAAAGGATCTTTACCTAT  450

seq1  CCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAAGAA  499
      ||||||| ||||| |||||||||||  || |||||||||||| |||||||
seq2  CCTAAATTAGATATGGGACTAATATTTAATATATATAAAGAATTCAAGAA  500

seq1  GGTGGACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCA  545
      |||||||| |||||||||||||||||||||||||||||| ||||||
seq2  GGTGGACTCCAGAAAATCAAATAACCCCATTAAAAAATGAGGCTCA  546

seq1: chr4_77921160_77922273
seq2: B6Ng01-063H14.g_67_1170

seq1  GAATTCACTGTGATTTTTCTTTAGAAGTGCCCTTTGATCTTCAAGCTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGTGATTTTTCTTTAGAAGTGCCCTTTGATCTTCAAGCTTGA  50

seq1  GTGAATTGATAGATGAGATTGGTTTTATACTGAATATGAAAGGACATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATTGATAGATGAGATTGGTTTTATACTGAATATGAAAGGACATTTT  100

seq1  CACTAAAATATTTTGGACACAAGAGAATTTTAATCAAATTCTAAAAATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAAATATTTTGGACACAAGAGAATTTTAATCAAATTCTAAAAATAA  150

seq1  TAGATATAAAGGAAGCTTGAGGTTGAGTTAAGCGTACTAAGGAAGAGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATATAAAGGAAGCTTGAGGTTGAGTTAAGCGTACTAAGGAAGAGGTG  200

seq1  TTGAGAAGAAAAATAGCCGAGGATGCAGAGTAGGCATATTGGTGACATGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAAGAAAAATAGCCGAGGATGCAGAGTAGGCATATTGGTGACATGC  250

seq1  AAATAGCACAGTGAGCTGTCAGGGGTGCATAGCCTCACACCTGAGGGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGCACAGTGAGCTGTCAGGGGTGCATAGCCTCACACCTGAGGGAAT  300

seq1  GGCTGTGCTGATCATACACATGGATGAACACGTGCAAACAGCTCAGATAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTGCTGATCATACACATGGATGAACACGTGCAAACAGCTCAGATAG  350

seq1  AAGGGGAAAATGAGAATCCAAAAACAAAATAGGAATCAGTCATCAGTGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGAAAATGAGAATCCAAAAACAAAATAGGAATCAGTCATCAGTGAG  400

seq1  TGCCTTAGGTGGGACTGTAATAAGGACAATACAGCAAATGGGAACAGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTAGGTGGGACTGTAATAAGGACAATACAGCAAATGGGAACAGAAG  450

seq1  CAGCTGTAGGGAAGACGAAATTCAGTACTGGCTTGGCCACGAAACTGAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGTAGGGAAGACGAAATTCAGTACTGGCTTGGCCACGAAACTGAGT  500

seq1  ACAGCTCCAGGAATAAAAATTGTGTTGAGTGAATTCTTAAGGAAGTTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTCCAGGAATAAAAATTGTGTTGAGTGAATTCTTAAGGAAGTTAAA  550

seq1  ATAACCCATCCACATAGTTGCTGTACAGAGGGCTCTTCAAGTTCTGGGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCCATCCACATAGTTGCTGTACAGAGGGCTCTTCAAGTTCTGGGTT  600

seq1  GTATTTTGATTTGGGTGTGTGTTGAATTGAAATATGCATAATACACAACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTGATTTGGGTGTGTGTTGAATTGAAATATGCATAATACACAACT  650

seq1  ACTGGTGATTAGATTTTAAAAGGAATGTACCTTCACACTTGTTATGTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTGATTAGATTTTAAAAGGAATGTACCTTCACACTTGTTATGTTTT  700

seq1  GAATCTTTGGGCCCACATAAAATTCTTATATTGAAATGTAAACACCCATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTTTGGGCCCACATAAAATTCTTATATTGAAATGTAAACACCCATC  750

seq1  ATGATGTTATTAAATATTAAATCCTGGGAGAGGTTGAATTTTTTTCATGA  800
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ATGATGTTATTAAATATTAAATCCTGGGAGAGGTTG-ATTTTTTTCATGA  799

seq1  AGTTTCTTCCCACCTTAATGGGCATAAGTCCCCTAAGAAAGAAAGCAAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCTTCCCACCTTAATGGGCATAAGTCCCCTAAGAAAGAAAGCAAGG  849

seq1  GAAA-GGTGATAACCTCA-TTTGAGGAGCACATAAGGACACAGACCTTGA  898
      |||| |||||| |||||| |||||||||||||| ||||||||||||||||
seq2  GAAAGGGTGATTACCTCATTTTGAGGAGCACAT-AGGACACAGACCTTGA  898

seq1  CATTTGCCTTAAACTCTCTAGACCTGCT-GGAAACAACTACAAC-TCTCT  946
      ||||||||||||||||||||||| |||| ||||||||||||||| |||||
seq2  CATTTGCCTTAAACTCTCTAGACTTGCTGGGAAACAACTACAACTTCTCT  948

seq1  CTTGTCAATGGTTATTTTATTAGTAATATTTGAGTCAAATGAGTTAATGA  996
      ||||||||||| |||||| ||||| |||||||||||||||||||| ||||
seq2  CTTGTCAATGGGTATTTTTTTAGT-ATATTTGAGTCAAATGAGTT-ATGA  996

seq1  ATAGGAGATTTATACTGCAGTTAAGATTGCTGTAGCTGCAGTTATCATAA  1046
      |||||||| ||||||||||||||||||   ||||||||||||||||||||
seq2  ATAGGAGAATTATACTGCAGTTAAGATGCTTGTAGCTGCAGTTATCATAA  1046

seq1  GTATTTATCACCAAATCCTTTCAAATTGCCCTCTTTAAATGTTAGGGATG  1096
      ||||||||||||||   |||||  |||| |||||| |    |||||   |
seq2  GTATTTATCACCAA--TCTTTC--ATTG-CCTCTTAA----TTAGGATAG  1087

seq1  ATTACTCCAGTATATATA  1114
      | | ||||||||||||||
seq2  AAT-CTCCAGTATATATA  1104