BAC Information

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BAC

Clone NameB6Ng01-063K04
Chromosome2 (Build37)
Map Location 167,511,534 - 167,711,481
singlet/doubletdoublet
Overlap geneCebpb
Upstream geneBC067047, Trp53rk, Arfgef2, LOC670802, Cse1l, Stau1, LOC383774, Ddx27, AI481105, 1500012F01Rik, LOC668950, Kcnb1, Ptgis, LOC668951, B4galt5, Slc9a8, Spata2, Zfp313, Snai1, Ube2v1, AI840826
Downstream geneLOC100043728, Ptpn1, 2310033K02Rik, Pard6b, Adnp, Dpm1, Mocs3, LOC100043908, Kcng1, LOC668952, Nfatc2, Atp9a, Sall4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-063K04.bB6Ng01-063K04.g
ACCDH883669DH883670
length2371,038
definitionDH883669|Mus musculus domesticus DNA, BAC clone: B6Ng01-063K04, 5' end.DH883670|Mus musculus domesticus DNA, BAC clone: B6Ng01-063K04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(167,711,245 - 167,711,481)(167,511,534 - 167,512,587)
sequence
ctggatatctatattcgagaaaactatatattaatgtaaaaacaaatgtc
catcaaacaacgaaaggaaaaccaaaatgtgatcagttcctacaagggag
tgctatacagccacaaaaaggaacaaagggctggttgctgcgtgaaccac
tttccactttccacgataaaggcagaagaggccctgtgcggtgggatccc
tttacgggaagaggaaggaggcgggaggggggggggt
gaattcactttaaagggacagctggggtctggtagcacaggcctgtgatt
ccagctgctctggaggttgaagtaggaggatcaaggccagcctgggcaac
ttgtcaacaccctgtctcaaaagaataaaaaagagggctggggtgtagct
tgctggcagagctgtggccagtgtgggcaaggccagggtctcccgactac
agcactgtcacaagaaaagaaaagaagagaagagaagagaagagaagaga
agagaagagaagagaagagaagagaagagaagagaagagaagagaagagg
aaagaaaagaggcacaccaggcacaccaagcacaccgcagtagtgctgag
ctaacccattcttggttggtctggccacaccagagacctttgcagcccag
gttcctccaaacatgaggttgggacaggaagcagggaaggaactgggtct
ggatagggctgtgccagctgctcgggcctggtggggcctcagagccctga
gggagggctggcagccacagcgaggtgacaggcatggcctattgagcaaa
gaacctggggagaacaacgatcctctggcctccccgtgggacagctgggt
cagccgtgggtgggtgagcctggcagggaggctgccatggggccagctag
cccaatctggaggccagagcgccaagctctgtgatgaggtggagtctggt
ctccagggcctgagtcacccctttgagtccccgtgtgacccagtcacctt
tctctagactcaagtttactgttagagctgattataacccctaggcttgt
gagactttctccaccgccttgctttcagtgtgacgaccctgagctgactc
ttagatctcctgagccccggtctcctacctgtgatcgcaaacagttggct
cactccccaaatttcaggggatcaacaatatataattatggctcataaga
cagcagaggccgctaagtcacacagcagatgctgcggtactgatttacct
cccagtcttgctgtgtctctccagacctgaatgttggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_167711245_167711481
seq2: B6Ng01-063K04.b_50_286 (reverse)

seq1  ACCCCCCCCCCTCCCGCCTCCTTCCTCTTCCCGTAAAGGGATCCCACCGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCCCCCCTCCCGCCTCCTTCCTCTTCCCGTAAAGGGATCCCACCGC  50

seq1  ACAGGGCCTCTTCTGCCTTTATCGTGGAAAGTGGAAAGTGGTTCACGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGCCTCTTCTGCCTTTATCGTGGAAAGTGGAAAGTGGTTCACGCAG  100

seq1  CAACCAGCCCTTTGTTCCTTTTTGTGGCTGTATAGCACTCCCTTGTAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCAGCCCTTTGTTCCTTTTTGTGGCTGTATAGCACTCCCTTGTAGGA  150

seq1  ACTGATCACATTTTGGTTTTCCTTTCGTTGTTTGATGGACATTTGTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATCACATTTTGGTTTTCCTTTCGTTGTTTGATGGACATTTGTTTTT  200

seq1  ACATTAATATATAGTTTTCTCGAATATAGATATCCAG  237
      |||||||||||||||||||||||||||||||||||||
seq2  ACATTAATATATAGTTTTCTCGAATATAGATATCCAG  237

seq1: chr2_167511534_167512587
seq2: B6Ng01-063K04.g_69_1106

seq1  GAATTCACTTTAAAGGGACAGCTGGGGTCTGGTAGCACAGGCCTGTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTAAAGGGACAGCTGGGGTCTGGTAGCACAGGCCTGTGATT  50

seq1  CCAGCTGCTCTGGAGGTTGAAGTAGGAGGATCAAGGCCAGCCTGGGCAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTGCTCTGGAGGTTGAAGTAGGAGGATCAAGGCCAGCCTGGGCAAC  100

seq1  TTGTCAACACCCTGTCTCAAAAGAATAAAAAAGAGGGCTGGGGTGTAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAACACCCTGTCTCAAAAGAATAAAAAAGAGGGCTGGGGTGTAGCT  150

seq1  TGCTGGCAGAGCTGTGGCCAGTGTGGGCAAGGCCAGGGTCTCCCGACTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGCAGAGCTGTGGCCAGTGTGGGCAAGGCCAGGGTCTCCCGACTAC  200

seq1  AGCACTGTCACAAGAAAAGAAAAGAAGAGAAGAGAAGAGAAGAGAAGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTGTCACAAGAAAAGAAAAGAAGAGAAGAGAAGAGAAGAGAAGAGA  250

seq1  AGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGG  300

seq1  AAAGAAAAGAGGCACACCAGGCACACCAAGCACACCGCAGTAGTGCTGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAAGAGGCACACCAGGCACACCAAGCACACCGCAGTAGTGCTGAG  350

seq1  CTAACCCATTCTTGGTTGGTCTGGCCACACCAGAGACCTTTGCAGCCCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACCCATTCTTGGTTGGTCTGGCCACACCAGAGACCTTTGCAGCCCAG  400

seq1  GTTCCTCCAAACATGAGGTTGGGACAGGAAGCAGGGAAGGAACTGGGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTCCAAACATGAGGTTGGGACAGGAAGCAGGGAAGGAACTGGGTCT  450

seq1  GGATAGGGCTGTGCCAGCTGCTCGGGCCTGGTGGGGCCTCAGAGCCCTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGGGCTGTGCCAGCTGCTCGGGCCTGGTGGGGCCTCAGAGCCCTGA  500

seq1  GGGAGGGCTGGCAGCCACAGCGAGGTGACAGGCATGGCCTATTGAGCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGGCTGGCAGCCACAGCGAGGTGACAGGCATGGCCTATTGAGCAAA  550

seq1  GAACCTGGGGAGAACAACGATCCTCTGGCCTCCCCGTGGGACAGCTGGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTGGGGAGAACAACGATCCTCTGGCCTCCCCGTGGGACAGCTGGGT  600

seq1  CAGCCGTGGGTGGGTGAGCCTGGCAGGGAGGCTGCCATGGGGCCAGCTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCGTGGGTGGGTGAGCCTGGCAGGGAGGCTGCCATGGGGCCAGCTAG  650

seq1  CCCAATCTGGAGGCCAGAGCGCCAAGCTCTGTGATGAGGTGGAGTCTGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAATCTGGAGGCCAGAGCGCCAAGCTCTGTGATGAGGTGGAGTCTGGT  700

seq1  CTCCAGGGCCTGAGTCACCCC-TTGAGTCCCCGTGTGACCCAAGTCACCT  749
      ||||||||||||||||||||| ||||||||||||||||||| ||||||||
seq2  CTCCAGGGCCTGAGTCACCCCTTTGAGTCCCCGTGTGACCC-AGTCACCT  749

seq1  TTCTCTAGACTCAAGTTTACTGTTAGAGCTGATTATAACCCCAAGGCTTG  799
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTCTCTAGACTCAAGTTTACTGTTAGAGCTGATTATAACCCCTAGGCTTG  799

seq1  GGAGACTTTCTCCACCGCCATTGC-TTCAGTGTGACGACCCTGAGCTGAC  848
       |||||||||||||||||| |||| |||||||||||||||||||||||||
seq2  TGAGACTTTCTCCACCGCC-TTGCTTTCAGTGTGACGACCCTGAGCTGAC  848

seq1  TCTTAGATCTCCTGAGCCCCGGTCTCCTAACCTGTGATCGCAAACAGTAT  898
      |||||||||||||||||||||||||||| ||||||||||||||||||| |
seq2  TCTTAGATCTCCTGAGCCCCGGTCTCCT-ACCTGTGATCGCAAACAGT-T  896

seq1  GGCTCACCTCCCACAAATTATCAGGGGGATCAAACGAGTATA-AAATATG  947
      |||||| ||||| |||||| ||| |||||||||   | |||| || ||||
seq2  GGCTCA-CTCCC-CAAATT-TCA-GGGGATCAA--CAATATATAATTATG  940

seq1  GCTCA-GAGACAGCAGAGGGCCGGCTAAGGTCACACAGCAGATGCTCGCG  996
      |||||  ||||||||||||  | ||||| ||||||||||||||||| |||
seq2  GCTCATAAGACAGCAGAGG--CCGCTAA-GTCACACAGCAGATGCT-GCG  986

seq1  GTACTGAATAACCCTCCCCAGGTCTTGCTGTGTCTCCCCAGAACCCTGAA  1046
      ||||||| | | ||||||   ||||||||||||||| |||||  |||| |
seq2  GTACTGATTTA-CCTCCC--AGTCTTGCTGTGTCTCTCCAGA--CCTG-A  1030

seq1  ATGTTGGC  1054
      ||||||||
seq2  ATGTTGGC  1038