BAC Information

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BAC

Clone NameB6Ng01-064E01
Chromosome2 (Build37)
Map Location 108,774,191 - 108,775,177
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043078, LOC668790, LOC623003, LOC100043423
Downstream geneLOC623031, Mett5d1, Kif18a, Bdnf, LOC100043427, Lin7c, Lgr4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064E01.bB6Ng01-064E01.g
ACCDH884093DH884094
length1,119984
definitionDH884093|Mus musculus domesticus DNA, BAC clone: B6Ng01-064E01, 5' end.DH884094|Mus musculus domesticus DNA, BAC clone: B6Ng01-064E01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagacccatttttttaatggggttatttgat
tttctggagtccaccttcttgagtactttatatatattggatattagtcc
cctatctgatttaggataggtaaagatcctttcccaatttattggtggcc
tttttgtcttattgatggtcttattggtgtcttttgccttacaaaagctt
tgcagttttatgaggtcccatttgtcaattctccatcttatagcccaagc
cattgctgttctattcaggaattttccccctgtacccatatcttcgaggc
tttcccccactttctcctctataagtttcagtgtctctggttttatgtgg
agctccttgatccacttagatttgatcttagtacaaggaaataggaatgg
atcaagttgcattcttcaacatgataaccacaagttgtgccagcaccatt
tgctgaaaatgctgtcttttttccacttgatggttttagctcccttgtca
aagataaagtgaccataggtgtgtgggttcatttctgggtgttcaatttt
attccattggtctacttgtctgtctctataccagtaccatgcagttttta
tcacaattgttctgtagtaaaactttaggtcagccatggtgattctacca
gaggttcttttatccttgaaaatagtttctgctatcctagtttttttgtt
attccagatgaatttgcatattgctctttctaattcgttgaagaattaag
ttggaattttgatggggattgcattgaatctgtagattgcttttggcaag
atagccatttttacagtgttggtcctgccaatccatgagcatgggagatc
tttccatcttctgagatcttctttaatttctttcttcagagacttgaaat
cttatcatacagatttttcacttccttagtagagtcatgccaaggtattg
atttttttttctgactattgagaaggtgttgttcctaaattctcctcagc
ttgtttaatctttgtgtagagaaaggccattgaactggttgagtaaattt
aatcagctacttacgagctgtttacaggttaaggaagtctctggtgaatt
tagggtcactagtgaactt
gaattcaaaaaggaagcattgagtcggtggttttacaggttaggaggagc
ttttttttattttttttcttcatatgtaacctcatgaggctttgcagcat
accaaacactaaatgactagaggctgcaaaagaagatctagcattaactg
agcttgtaaaatcacaaaccttggggtgaaggaatgaaagaatataacgg
tggtgggtgccgctcacctctgctattaaacaaataaagaataaaacaac
tttgagaagagaattaagatctgggttcagaatgttgcaaatagagacta
ccagaggcataatgaagttttccatgaaatcacatctcaagggatacttt
ctggaatgaaaagtaaaagtttaacactaccctaaggttaggagtaactg
tgaggtcaacacatttcataaagaaaattaaaataaatgcaaaaatgtgt
gaggggagttcaaaaataaatagtaggtaaagatgaacattataaacagt
gacgggcccggactattgaatatggtctcaagaatgttttacaatgtggt
taaaaatgaaatgggcactgtgaagcaagccaatagtggtggttctttaa
gcagagggtatactaatgttttccaggaaaactgtatggggagtccttat
attgaaaatgcccccaatggaggagttaggaaaaggactgatggaggtga
aggggattgcaaccccataagaagaaccacaatatcaaccaaccagatac
tgcagagttcccagggactaaactaccaactaaagagtacacatggaggc
acccatggctcccgctgcatatatagcagaggaggtacttatctggcatc
aatgagaggagaggctgttgggtctgtgaaggcttggtgccccagtgtaa
ggggatgccagagcggtgaggtgggaaagcaccctcatagaaacagggaa
aggggaaacggttaggggtttgtggaggggaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_108774191_108775177
seq2: B6Ng01-064E01.g_67_1050

seq1  GAATTCAAAAAGGAAGCATTGAGTCGGTGGTTTTACAGGTTAGGAGGAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAAAGGAAGCATTGAGTCGGTGGTTTTACAGGTTAGGAGGAGC  50

seq1  TTTTATTTATTTTTTTTCTTCATATGTAACCTCATGAGGCTTTGCAGCAT  100
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTATTTTTTTTCTTCATATGTAACCTCATGAGGCTTTGCAGCAT  100

seq1  ACCAAACACTAAATGACTAGAGGCTGCAAAAGAAGATCTAGCATTAACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAACACTAAATGACTAGAGGCTGCAAAAGAAGATCTAGCATTAACTG  150

seq1  AGCTTGTAAAATCACAAACCTTGGGGTGAAGGAATGAAAGAATATAACGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGTAAAATCACAAACCTTGGGGTGAAGGAATGAAAGAATATAACGG  200

seq1  TGGTGGGTGCCGCTCACCTCTGCTATTAAACAAATAAAGAATAAAACAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGGTGCCGCTCACCTCTGCTATTAAACAAATAAAGAATAAAACAAC  250

seq1  TTTGAGAAGAGAATTAAGATCTGGGTTCAGAATGTTGCAAATAGAGACTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGAAGAGAATTAAGATCTGGGTTCAGAATGTTGCAAATAGAGACTA  300

seq1  CCAGAGGCATAATGAAGTTTTCCATGAAATCACATCTCAAGGGATACTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGGCATAATGAAGTTTTCCATGAAATCACATCTCAAGGGATACTTT  350

seq1  CTGGAATGAAAAGTAAAAGTTTAACACTACCCTAAGGTTAGGAGTAACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAATGAAAAGTAAAAGTTTAACACTACCCTAAGGTTAGGAGTAACTG  400

seq1  TGAGGTCAACACATTTCATAAAGAAAATTAAAATAAATGCAAAAATGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTCAACACATTTCATAAAGAAAATTAAAATAAATGCAAAAATGTGT  450

seq1  GAGGGGAGTTCAAAAATAAATAGTAGGTAAAGATGAACATTATAAACAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGAGTTCAAAAATAAATAGTAGGTAAAGATGAACATTATAAACAGT  500

seq1  GACGGGCCCGGACTATTGAATATGGTCTCAAGAATGTTTTACAATGTGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGGGCCCGGACTATTGAATATGGTCTCAAGAATGTTTTACAATGTGGT  550

seq1  TAAAAATGAAATGGGCACTGTGAAGCAAGCCAATAGTGGTGGTTCTTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATGAAATGGGCACTGTGAAGCAAGCCAATAGTGGTGGTTCTTTAA  600

seq1  GCAGAGGGTATACTAATGTTTTCCAGGAAAACTGTATGGGGAGTCCTTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGGGTATACTAATGTTTTCCAGGAAAACTGTATGGGGAGTCCTTAT  650

seq1  ATTGAAAATGCCCCCAATGGAGGAGTTAGGAAAAGGACTGATGGAGGTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAAATGCCCCCAATGGAGGAGTTAGGAAAAGGACTGATGGAGGTGA  700

seq1  AGGGGATTGCAACCCCATAAGAAGAACCACAATATCAACCAACCAGATAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGATTGCAACCCCATAAGAAGAACCACAATATCAACCAACCAGATAC  750

seq1  TGCAGAGTTCCCAGGGACTAAACTACCAACTAAAGAGTACACATGGAGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAGTTCCCAGGGACTAAACTACCAACTAAAGAGTACACATGGAGGC  800

seq1  ACCCATGGCTCCCGCTGCATATATAGCAGAGGAGGTACTTATCTGGCATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATGGCTCCCGCTGCATATATAGCAGAGGAGGTACTTATCTGGCATC  850

seq1  AATGAGAGGAGAGGCTGTTGGTTCTGTGAAGGCTTGGTGCCCCAGTGTAA  900
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AATGAGAGGAGAGGCTGTTGGGTCTGTGAAGGCTTGGTGCCCCAGTGTAA  900

seq1  GGGGAATGCCAGAGCGGTGAGGTGGGAAAGCACCCTCATAGAAACAGGGG  950
      |||| |||||||||||||||||||||||||||||||||||||||||||| 
seq2  GGGG-ATGCCAGAGCGGTGAGGTGGGAAAGCACCCTCATAGAAACAGGGA  949

seq1  AAGGGGAAACGGGTTAGGGGATTTGTGGAGGGGAAAT  987
      |||||||||| ||||||||| ||||||||||||||||
seq2  AAGGGGAAAC-GGTTAGGGG-TTTGTGGAGGGGAAAT  984