BAC Information

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BAC

Clone NameB6Ng01-064M10
Chromosome2 (Build37)
Map Location 112,452,558 - 112,453,638
singlet/doubletsinglet
Overlap geneAven
Upstream geneOlfr1297, Olfr1298, Olfr1299, Olfr1300-ps1, Olfr1301, Olfr1302, Olfr1303, Olfr249-ps1, LOC668825, Olfr1305, Olfr1306, LOC668827, Olfr1307, Olfr1308, Olfr1309, LOC433463, Olfr1310, Olfr1311, Olfr1312, Olfr1313, Olfr1314, Olfr1315-ps1, Olfr1316, Olfr1317, Olfr1318, GA_x5J8B7W3P0G-705890-705633, LOC100043187, Agpat7, Nut, Nola3, Slc12a6, Tmem85, EG668839, 2410042D21Rik, 2900064A13Rik, Chrm5
Downstream geneRyr3, 4930563P21Rik, Fmn1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064M10.bB6Ng01-064M10.g
ACCDH884461DH884462
length1,072945
definitionDH884461|Mus musculus domesticus DNA, BAC clone: B6Ng01-064M10, 5' end.DH884462|Mus musculus domesticus DNA, BAC clone: B6Ng01-064M10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccctgtttagctctgttccccaatttttaatagggttatttgttt
ctcgagtctaagttcttgagttctttgtatatgttggatattagccctct
gtcagatgtagggttggtaaagatctttcccaatctgttggttgctgttt
tgtcttattgacaatgtcctttgccttacagaagctttgcaattttatga
ggtccttcccatttgtcaattcttgatcttagagcataagccattggtgt
tctgttcaggaaatttcccatgtgtttgaagcttttccccactttctctt
ctattagattcagtgtatctgcttttctgtggaagtccttgatccatttg
aacttgagctttgtttagggagataagaatggatcagtttgcattcttct
acatgttgactgccacctagtgagaatcacttgcaaatgctttgaggcca
atgtcagaatgacattgaccatatgtcctcaaattcacagagattgcctg
cctctgcctcccgagtactgggattaaaggcacatgccaccactacctgg
ctaggtactaccttttaatcgtatagtttacacataacaattagcgtcta
agaaaattcagcttaggaaaattttttgtggaaacttgcaacacattata
agcaattgaataaactcaaaacagcattatattcttttaacttttaaatc
caacttatttttatttttaaaaagtattgggtaaatagatttcatcatgg
attgtcataggtatatgtcagacattgttcatgttcatctgttccctgtc
tcttctccctaagtcctgtggggcctctccagtcagatagtttcatattt
gctgttttcctgtctcatatcaacatagtcacataaacacaaaccgcacg
cacacacataccatacgttgttggaatccaggctctgcacaaagtgttgc
acagtgtgaacagtttccccgctaaactagctatgctccctcctctattt
agtttgcttgctttcttcttttccctctacccttctccttcccttcttct
cccccccccaatctctgtaata
gaattcaaacaagcaaacaaacaaaaaacctatggtaagtccaggaaacg
gaatattactcagtgctaaaaagaactattaagccacaaaaatgaatgga
gaacttaaatgagtgttactaagttggagaaagccctttgaaaaggcttc
cattatcagatctagatataagacatttggagaggcaaaagcctttgaga
tagtgaagtgattagtaatttccagaagctatgggaaaggatagctacac
tgggactcagagaagtttggggacaacggaaaatatgctatattatctgt
gacggtacagctatgccattattcattattcactatccatcacagagaat
gagcccccatttaaattttagactttgctgcagatgatgtgtccctgtag
gctttcctgttgtagccaatgaagtgccctcctgggggacattggcagtg
gacggtggatgagacacaggagtgggcatagaaggggctacggggactct
ctgccttcctctcaatctttttgtgactctaaaactgaatcaaataaact
ttaaaatgggtaaggaacagcctaacacatttcaaatataaaggctgagt
aaaggtaacctacattctctttgtaaccttctaacgcccagaggcttcac
tgcaaagtaccatttgcccaacatgagaggtatagggttagaagttaaca
cagactcagggctcaaaatgggctttctttccaatatattgtgctggctg
gtcttatatcaatttgacaaaatctagagttgtctgaaaggaaggaagct
caattgagaaaatgctcaggagatccaactgtagggcatttttaaaatta
gtgattgatgggagggcccaggcactgtgggtggtgccatccttgggatg
ggtggtcctgggtcctataaaaagctgactaagcaagccatggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_112452558_112453638
seq2: B6Ng01-064M10.b_44_1115

seq1  GAATTCCCTGTTTAGCTCTGTTCCCCAATTTTTAATAGGGTTATTTGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTGTTTAGCTCTGTTCCCCAATTTTTAATAGGGTTATTTGTTT  50

seq1  CTCGAGTCTAAGTTCTTGAGTTCTTTGTATATGTTGGATATTAGCCCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGAGTCTAAGTTCTTGAGTTCTTTGTATATGTTGGATATTAGCCCTCT  100

seq1  GTCAGATGTAGGGTTGGTAAAGATCTTTCCCAATCTGTTGGTTGCTGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGATGTAGGGTTGGTAAAGATCTTTCCCAATCTGTTGGTTGCTGTTT  150

seq1  TGTCTTATTGACAATGTCCTTTGCCTTACAGAAGCTTTGCAATTTTATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTATTGACAATGTCCTTTGCCTTACAGAAGCTTTGCAATTTTATGA  200

seq1  GGTCCTTCCCATTTGTCAATTCTTGATCTTAGAGCATAAGCCATTGGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTTCCCATTTGTCAATTCTTGATCTTAGAGCATAAGCCATTGGTGT  250

seq1  TCTGTTCAGGAAATTTCCCATGTGTTTGAAGCTTTTCCCCACTTTCTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTCAGGAAATTTCCCATGTGTTTGAAGCTTTTCCCCACTTTCTCTT  300

seq1  CTATTAGATTCAGTGTATCTGCTTTTCTGTGGAAGTCCTTGATCCATTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTAGATTCAGTGTATCTGCTTTTCTGTGGAAGTCCTTGATCCATTTG  350

seq1  AACTTGAGCTTTGTTTAGGGAGATAAGAATGGATCAGTTTGCATTCTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGAGCTTTGTTTAGGGAGATAAGAATGGATCAGTTTGCATTCTTCT  400

seq1  ACATGTTGACTGCCACCTAGTGAGAATCACTTGCAAATGCTTTGAGGCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTTGACTGCCACCTAGTGAGAATCACTTGCAAATGCTTTGAGGCCA  450

seq1  ATGTCAGAATGACATTGACCATATGTCCTCAAATTCACAGAGATTGCCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCAGAATGACATTGACCATATGTCCTCAAATTCACAGAGATTGCCTG  500

seq1  CCTCTGCCTCCCGAGTACTGGGATTAAAGGCACATGCCACCACTACCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCCTCCCGAGTACTGGGATTAAAGGCACATGCCACCACTACCTGG  550

seq1  CTAGGTACTACCTTTTAATCGTATAGTTTACACATAACAATTAGCGTCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTACTACCTTTTAATCGTATAGTTTACACATAACAATTAGCGTCTA  600

seq1  AGAAAATTCAGCTTAGGAAAATTTTTTGTGGAAACTTGCAACACATTATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATTCAGCTTAGGAAAATTTTTTGTGGAAACTTGCAACACATTATA  650

seq1  AGCAATTGAATAAACTCAAAACAGCATTATATTCTTTTAACTTTTAAATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATTGAATAAACTCAAAACAGCATTATATTCTTTTAACTTTTAAATC  700

seq1  CAACTTATTTTTATTTTTAAAAAGTATTGGGTAAATAGATTTCATCATGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTATTTTTATTTTTAAAAAGTATTGGGTAAATAGATTTCATCATGG  750

seq1  ATTGTCATAGGTATATGTCAGACATTGTTCATGTTCATCTGTTCCCTGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCATAGGTATATGTCAGACATTGTTCATGTTCATCTGTTCCCTGTC  800

seq1  TCTTCTCCCTAAGTCCTGTGGGGCCTCTCCAGTCAAGATAGTTTCATATT  850
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TCTTCTCCCTAAGTCCTGTGGGGCCTCTCCAGTC-AGATAGTTTCATATT  849

seq1  TGCTGTTTTCCTGTCTCATATCAACATAGTCACATAAACACAAA-CGCAC  899
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TGCTGTTTTCCTGTCTCATATCAACATAGTCACATAAACACAAACCGCAC  899

seq1  GCACACACATACCATACGT--GTGGAATCCAGGCTCTGCACAAAGTG-TG  946
      |||||||||||||||||||   ||||||||||||||||||||||||| ||
seq2  GCACACACATACCATACGTTGTTGGAATCCAGGCTCTGCACAAAGTGTTG  949

seq1  CACAGTGTGAACAGTTTTCCCCGCTAAACTAGCCTATTGCTCCCTCCTCT  996
      |||||||||||||| ||||||||||||||||| ||| |||||||||||||
seq2  CACAGTGTGAACAG-TTTCCCCGCTAAACTAG-CTA-TGCTCCCTCCTCT  996

seq1  TATTTTAGTTTGCTTGCTTTCTTCCTTTTCCCCTCTACCCCTTCTCCCTT  1046
         |||||||||||||||||||||  ||| ||||||| ||||||| ||||
seq2  --ATTTAGTTTGCTTGCTTTCTTC--TTTTCCCTCTA-CCCTTCT-CCTT  1040

seq1  CCCTTCTTCTCCCCCCCCCCCAAATCTCTGTAATA  1081
      |||||||||||||||||||   |||||||||||||
seq2  CCCTTCTTCTCCCCCCCCC---AATCTCTGTAATA  1072