BAC Information

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BAC

Clone NameB6Ng01-065H15
Chromosome2 (Build37)
Map Location 86,115,169 - 86,116,206
singlet/doubletsinglet
Overlap geneOlfr1051
Upstream geneOlfr987, GA_x5J8B7W531T-1241080-1240524, Olfr988, GA_x5J8B7W531T-1286425-1285652, Olfr990-ps1, Olfr991-ps1, Olfr992, Olfr993, Olfr994, Olfr995, 4833423E24Rik, Olfr996, Olfr997-ps1, Olfr998, Olfr999-ps1, Olfr1000, Olfr1001-ps1, Olfr1002, GA_x5J8B7W531T-1558688-1559570, Olfr1004-ps1, Olfr154, GA_x5J8B7W531T-1577060-1577325, Olfr1006, GA_x5J8B7W531T-1588603-1588734, Olfr1008, Olfr1009, Olfr1010, Olfr1012, Olfr1013, Olfr1014, Olfr1015, Olfr1016, GA_x5J8B7W3KVV-518538-519236, Olfr1018, Olfr1019, Olfr1020, Olfr1021-ps1, Olfr1022, Olfr1023, Olfr1024, Olfr1025-ps1, Olfr1026, Olfr1027-ps1, Olfr1028, Olfr1029, Olfr1030, Olfr1031, Olfr1032, LOC100042075, Olfr1033, Olfr1034, Olfr1533-ps1, Olfr1035-ps1, Olfr1036, Olfr1037, LOC100041372, Olfr1038, Olfr1039, Olfr1040, GA_x5J8B7W3KVV-170014-170572, Olfr1042, Olfr1043, Olfr1044, Olfr52, Olfr1045, Olfr1046, Olfr1047, Olfr1048, Olfr1049, Olfr1050-ps1
Downstream geneGA_x5J8B7W3KVV-25848-25992, Olfr1052, Olfr1053-ps1, Olfr1054, Olfr1055, Olfr1056, Olfr1057, GA_x5J8B7TRQ4E-1174-939, Olfr1058, Olfr1059-ps1, Olfr1515, Olfr1062, Olfr1063-ps1, Olfr1064-ps1, Olfr1065, Olfr1066, Olfr1069-ps1, Olfr1070-ps1, Olfr228, Olfr1073-ps1, Olfr1075-ps1, GA_x5J8B7W4CQV-104617-103730, Olfr1076, LOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805, Olfr1079, Olfr1080, Olfr1081-ps1, Olfr1082, GA_x5J8B7W4CQV-18360-18784, Olfr1083, Olfr1084, Olfr1085, Olfr1086, Olfr1087, Olfr1088-ps1, Olfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302, Olfr1093, Olfr141, Olfr1094, Olfr1095, Olfr1096-ps1, Olfr1097, Olfr1098, Olfr1099, Olfr1100, Olfr1101, Olfr1102, Olfr1103-ps1, Olfr1104, Olfr1105, Olfr1106, Olfr1107, GA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259, LOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115, Olfr1521-ps1, LOC100041923
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065H15.bB6Ng01-065H15.g
ACCDH884940DH884941
length1,1531,028
definitionDH884940|Mus musculus domesticus DNA, BAC clone: B6Ng01-065H15, 5' end.DH884941|Mus musculus domesticus DNA, BAC clone: B6Ng01-065H15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgtttagctctgtagcccattttttaattgggttatttggtt
ttctggagtctaccttcttgagttcttcatatattgtgtatattagtcct
ctgtcagatgtagaattagtaaagatattttcccaatctgtatactgcca
ttttctcctattgacagcagtgtcctttgctttatagaagcttttcagtt
tcaggagggcctaggaggactgaaatggtaatcgcagttagggcctcttt
tcgctggcagaccaacgaagaggacgaattagtggactgatcccacaaat
gaaaaaaaaaaaaaaaaactcttctgaatgataataaatcaatagaggaa
ccaattgcacaagaatgcaaaaatcagatttttcttcaaaaaaggcactg
gctgagaggcagggggtgaggctatcaagacaaacccaccaagtttcatt
tggaggaactaaatattggctactaatatcaggtgcaagggcagtattac
taagatgggcatactatgaagggggtgtattagaagtcacacagagaccc
aaccctgagacctgatagagagataaaccattccacttttcgggttgcca
gcagtaatggtggagattatttgttgcggtaaaatggccaggaacagcaa
tgccttcataaaaaggtggttgggaatggtaacacagccagcaatcatca
agattaggggaggtggcattaagtgtaagaaatgtttgattcactaaggg
tgaggataaagttcctagtctgaatggagggggcgaattgactatgggag
caagggaagtttctgaggtaaagtatgagcagtttctgtaaaaggtagag
ggtcagtttctggttgtttgtttgtttggtttgtttgttgttgttttgtg
gctgtggatgaggactaaacaggttgagacataggacctggcatttggca
tgacagttcttgaggacttatggtaaagtgagcagcatcttgctgattga
taaggaaataccccatgaaatccccaccccatctttggactaaatggtcc
gttaatctgcggagtccccacctaggtgcatggtcggaatttacagaaga
tatgatttaggatcctgggctgaagaattcgtggcatatatatccgcaga
aga
gaattccatatctctacagtatcttccaggctctgctgttccctattagg
tatttcacattaagcttctgtggtgctaatgttataagccatttctattg
tgatgttgtccccttactacctttgatctgttcacatgtagaggagacag
aattattgactatactgttttcagccttcaatttaatctcttctcttgtt
gttgttcttttgtcttacatgctaattttgttaaccatatttcgaatgcg
ttctgcagaaggtaggaaaaaagctttctccacttgtggttcccatctga
cagtggtggttgtgttctatggttctctactcttcatgtatgttcagcct
aaatctgctcactcatttgaatatgacaaagcagcatctgtgttttatac
tttagtgatccccatgcttaaccccttgatttatagtttaaggaacaaag
aggtaaaaaatgcctttcatagagtatttaagaatctatgaagactgcat
tattcagtattaagtaataatatgtgacaattgtaactgccatatgatat
ttccaaaatagttgcatttaactccacaaaattttattatagtttaaatt
gagatattgttttacaattttactcaattcctcccttatagaaatattaa
tttaatcttgcatccttactcttatttcctgcttcagaataaatatttaa
ttcagtgatttccaagcagacactttactaaaaatgaataaatgataaat
tctatattaataacttatgttgttaccactaattatttgtagaaagcacc
tatcttcattattttttgtagtactaatacataaagcaatatgataaaaa
cagtctctcattctcttttagaatcattttatacagattataaaataata
aatgtttagactcattgtgacatatttactatacatttcttttggacttt
ggtattttaatagaataccattattttgtatcaggtgtactttttaaaac
tgtatatttattactctaactaattttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_86115169_86116206
seq2: B6Ng01-065H15.g_68_1095 (reverse)

seq1  AAAATTTAGTTTAAGAGTAATAAATATACAGGTTTTAAAAAGTAACAACT  50
      |||| ||||||  ||||||||||||||||| |||||||||||| ||| ||
seq2  AAAAATTAGTT--AGAGTAATAAATATACA-GTTTTAAAAAGT-ACACCT  46

seq1  GGATACAAAATTAATGGGTATTTCTATTAAAATACCAAAGTCCAAAAGAT  100
       ||||||||| |||| |||| |||||||||||||||||||||||||||| 
seq2  -GATACAAAA-TAAT-GGTA-TTCTATTAAAATACCAAAGTCCAAAAGAA  92

seq1  ATGTATAGTAAATATTGTCACAATGAGTCTTAAACATTTATTATTTTAT-  149
      |||||||||||||| |||||||||||||| ||||||||||||||||||| 
seq2  ATGTATAGTAAATA-TGTCACAATGAGTC-TAAACATTTATTATTTTATA  140

seq1  ATCTGTATAAAATGATTTCTAAAAGAGAATGAGAGACTGTTTTTTATCAT  199
      ||||||||||||||| ||||||||||||||||||||||| ||||||||||
seq2  ATCTGTATAAAATGA-TTCTAAAAGAGAATGAGAGACTG-TTTTTATCAT  188

seq1  ATTGCTTTATGTATTAGTACTAC-AAAAATAATGAAGATAGGTGCTTTCT  248
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ATTGCTTTATGTATTAGTACTACAAAAAATAATGAAGATAGGTGCTTTCT  238

seq1  ACAAATAATTAGTGGTAACAACATAAGTTATTAATATAGAATTTATCATT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATAATTAGTGGTAACAACATAAGTTATTAATATAGAATTTATCATT  288

seq1  TATTCATTTTTAGTAAAGTGTCTGCTTGGAAATCACTGAATTAAATATTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCATTTTTAGTAAAGTGTCTGCTTGGAAATCACTGAATTAAATATTT  338

seq1  ATTCTGAAGCAGGAAATAAGAGTAAGGATGCAAGATTAAATTAATATTTC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGAAGCAGGAAATAAGAGTAAGGATGCAAGATTAAATTAATATTTC  388

seq1  TATAAGGGAGGAATTGAGTAAAATTGTAAAACAATATCTCAATTTAAACT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGGGAGGAATTGAGTAAAATTGTAAAACAATATCTCAATTTAAACT  438

seq1  ATAATAAAATTTTGTGGAGTTAAATGCAACTATTTTGGAAATATCATATG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAAAATTTTGTGGAGTTAAATGCAACTATTTTGGAAATATCATATG  488

seq1  GCAGTTACAATTGTCACATATTATTACTTAATACTGAATAATGCAGTCTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTACAATTGTCACATATTATTACTTAATACTGAATAATGCAGTCTT  538

seq1  CATAGATTCTTAAATACTCTATGAAAGGCATTTTTTACCTCTTTGTTCCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGATTCTTAAATACTCTATGAAAGGCATTTTTTACCTCTTTGTTCCT  588

seq1  TAAACTATAAATCAAGGGGTTAAGCATGGGGATCACTAAAGTATAAAACA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTATAAATCAAGGGGTTAAGCATGGGGATCACTAAAGTATAAAACA  638

seq1  CAGATGCTGCTTTGTCATATTCAAATGAGTGAGCAGATTTAGGCTGAACA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGCTGCTTTGTCATATTCAAATGAGTGAGCAGATTTAGGCTGAACA  688

seq1  TACATGAAGAGTAGAGAACCATAGAACACAACCACCACTGTCAGATGGGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGAAGAGTAGAGAACCATAGAACACAACCACCACTGTCAGATGGGA  738

seq1  ACCACAAGTGGAGAAAGCTTTTTTCCTACCTTCTGCAGAACGCATTCGAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAAGTGGAGAAAGCTTTTTTCCTACCTTCTGCAGAACGCATTCGAA  788

seq1  ATATGGTTAACAAAATTAGCATGTAAGACAAAAGAACAACAACAAGAGAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGTTAACAAAATTAGCATGTAAGACAAAAGAACAACAACAAGAGAA  838

seq1  GAGATTAAATTGAAGGCTGAAAACAGTATAGTCAATAATTCTGTCTCCTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTAAATTGAAGGCTGAAAACAGTATAGTCAATAATTCTGTCTCCTC  888

seq1  TACATGTGAACAGATCAAAGGTAGTAAGGGGACAACATCACAATAGAAAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGTGAACAGATCAAAGGTAGTAAGGGGACAACATCACAATAGAAAT  938

seq1  GGCTTATAACATTAGCACCACAGAAGCTTAATGTGAAATACCTAATAGGG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTATAACATTAGCACCACAGAAGCTTAATGTGAAATACCTAATAGGG  988

seq1  AACAGCAGAGCCTGGAAGATACTGTAGAGATATGGAATTC  1038
      ||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCAGAGCCTGGAAGATACTGTAGAGATATGGAATTC  1028