BAC Information

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BAC

Clone NameB6Ng01-065P05
Chromosome2 (Build37)
Map Location 7,147,233 - 7,291,901
singlet/doubletdoublet
Overlap genenone
Upstream gene1700014B07Rik, Usp6nl, LOC100040387, Cugbp2, LOC100040659
Downstream geneLOC100040648, LOC672230
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065P05.bB6Ng01-065P05.g
ACCDH885275DH885276
length1,145491
definitionDH885275|Mus musculus domesticus DNA, BAC clone: B6Ng01-065P05, 5' end.DH885276|Mus musculus domesticus DNA, BAC clone: B6Ng01-065P05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,290,750 - 7,291,901)(7,147,233 - 7,147,729)
sequence
gaattccttctgtctttttgctcctgtgaataaagtctctatgaagcaag
ctgaacaaccatctcttctggtcctgactgccattcattcatctgtgttc
atagccaagatcaaaattgcatgatatgccggagtattttttaactctag
tcatctccattttatccccagcagaggttttcaggacttatacttggctt
accaaactcactgcctggtctttggggaacagatgagagcatgtatgtta
tggcttgaatttggatggtctgaatgcttgtttccaaggctcgagccttt
ggcagtgtcattaggggtagaacttgcagtgttataccctattacacata
ccagttatggttgaaattatcaatttaatgtagtatttatttcatcatct
aaatcaaacagaacttcaatgcctttagtaagacgtccaaattctttaat
gaactgtagtcttgtcaacactcccatttctccatgccctgattgtgata
tactctactgaatgtcatttggccaacccacttctaacctttccctgatg
atctgtagcaggaagtatggctgtttctgagaaaacccgctggctctttg
ttctcatgagctgcagcctgctggcaaaatctttaagctgtatatactaa
tatcttttccaggcagagcagtcctctcctgacagcaaactgatgtctca
taaacattgaattaattgagacctttacaggcactattatgtagataatg
cttcaagcatcattatccctttattttactccctttttttctatcaaaga
aaagaaataaaggtaaataatagaacctcaaaataatggttttcaaatat
tgggcattcaaaaagttttcacaaaaggctaaattcaacatcatattgaa
catttatcttgataaattttgtgttgaatgatagatggtaagtagatgag
gaaccatgaggttctagatgctatagcagtaattctctgaatataagatt
cagtcctttctaataatgtatcttttaatgggaatacaagtaaaaaaaac
tgggtagatttaataaaacataacttacatggaaagcatgagctaagact
gggagatagaccatagagcctggttcatggttcatgttcaaacac

agcctgggaggctggcagcaggccattgcaccacacagctagatgtattt
tgaaattaattttaatctatttttttcaatctaaagctgattatggagtt
ggtgttaagggatgtgtgattgaaattgagatctatgaaaaaaatccatc
ttaaaatttcttttgctctgtacacatagcatgttctaaatgttgcatat
gggtggatatctgctacataatgtaattcctaagtacacatgacaaagaa
atacactatttctatttctactttgaagataaagaagccgaggtgacctt
gcctatggtcactatgaactgggaaatggactttatgcagttaaaccttg
ctttgtcagtatgtgatactctaattttctccactacatcctgctaccat
ctaaacaaaggtagagatactgtgttgtgggtgagttgagatcgtaggag
aacggtgatttttatatttctccataatggtcagttagatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_7290750_7291901
seq2: B6Ng01-065P05.b_46_1190 (reverse)

seq1  GTGTTTG-ACATGAAACATGAAACAAGGCTCTATTAGGTC-ATCTCCCAG  48
      ||||||| ||||||| |||| ||| |||||||||  |||| |||||||||
seq2  GTGTTTGAACATGAACCATG-AACCAGGCTCTAT--GGTCTATCTCCCAG  47

seq1  TCTTAGCTACTGCTTTCCATGTAAGTTATGTTTTATTAAATCTACCAGTT  98
      ||||||||  ||||||||||||||||||||||||||||||||||||   |
seq2  TCTTAGCTCATGCTTTCCATGTAAGTTATGTTTTATTAAATCTACCCAGT  97

seq1  TTTTTTTACTGTGTTATTCCCATTTAAAAGATTACATTTATTAGAAAGGA  148
      |||||||||| || |||||||| |||||||| |||| |||||||||||||
seq2  TTTTTTTACT-TG-TATTCCCA-TTAAAAGA-TACA-TTATTAGAAAGGA  142

seq1  CTGAATCTAATATTCAGAGAATATCTGCTATAGCATCTTAGAACCTCATG  198
      |||||||| |||||||||||||  ||||||||||||| ||||||||||||
seq2  CTGAATCTTATATTCAGAGAATTACTGCTATAGCATC-TAGAACCTCATG  191

seq1  GTTCCTCATCTACTTACCATTCTATCATTCAACAACAAAATTTATCAAGA  248
      ||||||||||||||||||| ||||||||||||| ||||||||||||||||
seq2  GTTCCTCATCTACTTACCA-TCTATCATTCAAC-ACAAAATTTATCAAGA  239

seq1  TAAATGTTC-ATATGATGTTGAATTTAGCCTTTTGTGAAAACTTTTTGAA  297
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTTCAATATGATGTTGAATTTAGCCTTTTGTGAAAACTTTTTGAA  289

seq1  TG-CCAATATTTGAAAACCATTATTTTGAGGTTCTATTATTTACCTTTAT  346
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCAATATTTGAAAACCATTATTTTGAGGTTCTATTATTTACCTTTAT  339

seq1  TTCTTTTCTTTGATAGAAAAAAAAGGAGTAAAATAAAGGGATAATGATGC  396
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TTCTTTTCTTTGATAGAAAAAAAGGGAGTAAAATAAAGGGATAATGATGC  389

seq1  TTGAAGCATTATCTACATAATAGTGCCTGTAAAGGTCTCAATTAATTCAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGCATTATCTACATAATAGTGCCTGTAAAGGTCTCAATTAATTCAA  439

seq1  TGTTTATGAGACATCAGTTTGCTGTCAGGAGAGGACTGCTCTGCCTGGAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATGAGACATCAGTTTGCTGTCAGGAGAGGACTGCTCTGCCTGGAA  489

seq1  AAGATATTAGTATATACAGCTTAAAGATTTTGCCAGCAGGCTGCAGCTCA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATATTAGTATATACAGCTTAAAGATTTTGCCAGCAGGCTGCAGCTCA  539

seq1  TGAGAACAAAGAGCCAGCGGGTTTTCTCAGAAACAGCCATACTTCCTGCT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAACAAAGAGCCAGCGGGTTTTCTCAGAAACAGCCATACTTCCTGCT  589

seq1  ACAGATCATCAGGGAAAGGTTAGAAGTGGGTTGGCCAAATGACATTCAGT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATCATCAGGGAAAGGTTAGAAGTGGGTTGGCCAAATGACATTCAGT  639

seq1  AGAGTATATCACAATCAGGGCATGGAGAAATGGGAGTGTTGACAAGACTA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTATATCACAATCAGGGCATGGAGAAATGGGAGTGTTGACAAGACTA  689

seq1  CAGTTCATTAAAGAATTTGGACGTCTTACTAAAGGCATTGAAGTTCTGTT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCATTAAAGAATTTGGACGTCTTACTAAAGGCATTGAAGTTCTGTT  739

seq1  TGATTTAGATGATGAAATAAATACTACATTAAATTGATAATTTCAACCAT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTAGATGATGAAATAAATACTACATTAAATTGATAATTTCAACCAT  789

seq1  AACTGGTATGTGTAATAGGGTATAACACTGCAAGTTCTACCCCTAATGAC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGTATGTGTAATAGGGTATAACACTGCAAGTTCTACCCCTAATGAC  839

seq1  ACTGCCAAAGGCTCGAGCCTTGGAAACAAGCATTCAGACCATCCAAATTC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCAAAGGCTCGAGCCTTGGAAACAAGCATTCAGACCATCCAAATTC  889

seq1  AAGCCATAACATACATGCTCTCATCTGTTCCCCAAAGACCAGGCAGTGAG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCATAACATACATGCTCTCATCTGTTCCCCAAAGACCAGGCAGTGAG  939

seq1  TTTGGTAAGCCAAGTATAAGTCCTGAAAACCTCTGCTGGGGATAAAATGG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTAAGCCAAGTATAAGTCCTGAAAACCTCTGCTGGGGATAAAATGG  989

seq1  AGATGACTAGAGTTAAAAAATACTCCGGCATATCATGCAATTTTGATCTT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGACTAGAGTTAAAAAATACTCCGGCATATCATGCAATTTTGATCTT  1039

seq1  GGCTATGAACACAGATGAATGAATGGCAGTCAGGACCAGAAGAGATGGTT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATGAACACAGATGAATGAATGGCAGTCAGGACCAGAAGAGATGGTT  1089

seq1  GTTCAGCTTGCTTCATAGAGACTTTATTCACAGGAGCAAAAAGACAGAAG  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGCTTGCTTCATAGAGACTTTATTCACAGGAGCAAAAAGACAGAAG  1139

seq1  GAATTC  1152
      ||||||
seq2  GAATTC  1145


seq1: chr2_7147233_7147729
seq2: B6Ng01-065P05.g_71_567

seq1  GAATTCAGCCTGGGAGGCTGGCAGCAGGCCATTGCACCACACAGCTAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCCTGGGAGGCTGGCAGCAGGCCATTGCACCACACAGCTAGAT  50

seq1  GTATTTTGAAATTAATTTTAATCTATTTTTTTCAATCTAAAGCTGATTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTGAAATTAATTTTAATCTATTTTTTTCAATCTAAAGCTGATTAT  100

seq1  GGAGTTGGTGTTAAGGGATGTGTGATTGAAATTGAGATCTATGAAAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTGGTGTTAAGGGATGTGTGATTGAAATTGAGATCTATGAAAAAAA  150

seq1  TCCATCTTAAAATTTCTTTTGCTCTGTACACATAGCATGTTCTAAATGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCTTAAAATTTCTTTTGCTCTGTACACATAGCATGTTCTAAATGTT  200

seq1  GCATATGGGTGGATATCTGCTACATAATGTAATTCCTAAGTACACATGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATGGGTGGATATCTGCTACATAATGTAATTCCTAAGTACACATGAC  250

seq1  AAAGAAATACACTATTTCTATTTCTACTTTGAAGATAAAGAAGCCGAGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAATACACTATTTCTATTTCTACTTTGAAGATAAAGAAGCCGAGGT  300

seq1  GACCTTGCCTATGGTCACTATGAACTGGGAAATGGACTTTATGCAGTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTGCCTATGGTCACTATGAACTGGGAAATGGACTTTATGCAGTTAA  350

seq1  ACCTTGCTTTGTCAGTATGTGATACTCTAATTTTCTCCACTACATCCTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGCTTTGTCAGTATGTGATACTCTAATTTTCTCCACTACATCCTGC  400

seq1  TACCATCTAAACAAAGGTAGAGATACTGTGTTGTGGGTGAGTTGAGATCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATCTAAACAAAGGTAGAGATACTGTGTTGTGGGTGAGTTGAGATCG  450

seq1  TAGGAGAACGGTGATTTTTATATTTCTCCAGAATGGTCAGTAAGATC  497
      |||||||||||||||||||||||||||||| |||||||||| |||||
seq2  TAGGAGAACGGTGATTTTTATATTTCTCCATAATGGTCAGTTAGATC  497


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