BAC Information

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BAC

Clone NameB6Ng01-067A22
Chromosome2 (Build37)
Map Location 152,709,716 - 152,829,943
singlet/doubletdoublet
Overlap geneTpx2, Mylk2, Fkhl18, Dusp15, Ttll9
Upstream geneAngpt4, 5430432M24Rik, 2310046K01Rik, Scrt2, Srxn1, Tcf15, LOC100043843, Csnk2a1, Tbc1d20, Rbck1, Trib3, LOC628060, Nrsn2, Sox12, Zcchc3, 6820408C15Rik, EG629114, LOC668930, 9230107O10Rik, 9230002F21Rik, EG654457, OTTMUSG00000015852, Defb29, 4930525K10Rik, Defb19, OTTMUSG00000015859, Defb36, OTTMUSG00000015862, Rem1, H13, Mcts2, Id1, LOC629170, Cox4i2, Bcl2l1
Downstream genePdrg1, Xkr7, BC020535, Hck, Tm9sf4, Tspyl3, Plagl2, Pofut1, Kif3b, 2500004C02Rik, Asxl1, 8430427H17Rik, Commd7, 7530422B04Rik, Dnmt3b, LOC668932, Mapre1, EG329541, LOC100043869, Spag4l, Bpil1, Bpil3, Rya3, LOC100043870, Gm1006, EG545477
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067A22.bB6Ng01-067A22.g
ACCDH886062DH886063
length1,0971,062
definitionDH886062|Mus musculus domesticus DNA, BAC clone: B6Ng01-067A22, 5' end.DH886063|Mus musculus domesticus DNA, BAC clone: B6Ng01-067A22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(152,709,716 - 152,710,829)(152,828,882 - 152,829,943)
sequence
gaattcacctacatactatccttcaataaggatgataagaggaagggagg
gaacatctgtcaggttgagtgctatcaactgagttgagcatagaaaaaca
ggttgtctgctttgtcggtttctagttgggttagcacttaaaggtgacct
ggatggtggggaactaagcaagcgtttgtggttttgttttacaggcttgt
taccctccaaatctgtgaacaagattgcacgagacccccagacccccata
ctgcagaccaaatatcgtacaagggctgtgacttgcaaaagtactgcaga
gcaggaggccgaggagcttgagaaactgcaacagtaggtcccactggcag
tgtctgagaaaggctggccactcctgcctgcctgctttcagtcctgttgg
gcggtggtaactgttttccctttcatgaaaatgcaagccatttagtggct
gcgtaggctgtgctcctgtctctgtgactgaaaatgggactatgtaggtg
ccctggagcagaatctgatgagtcatctgaaaggatgactttgctttggt
tttttgtttgcttgcttttaaattctatttgtggaagttttgcttgcatg
caccactggcatgcctgtgctcatggaaggcagaagaggactttggagcc
tctagaaatggagttacagatacgtggttgttcgctatcatgtgggtgtg
ctggggatttttggggagtagcagccagtgctttataaacccctgagcca
tctttccaggcccccaaagtttgggaacttgaatttctggtcctcctgtc
tctgccacagtgcgaggattataggcgcatgcactcatagagcctggagc
cccggggggaccccaggccatgccgttcacccttttctcagaggtgaaga
tgactatggagaggagagatcatgctgtccatggtggatcatcttagcgc
ttctactttgtctacgtgtgtacttttatttaatttaaaagcttttatgt
ttatacttttgtgttgtaaagatacaaatttcaagcacggacttgatcca
gaattttgaaagtgctccatctgccaagagagcacctgttaaacctc
gaattcactaaggggcttgggcctctttctaagtaagcctatgcctgctg
ctcagtgattcttctacttccagggagccagaaggaaaagccaacttccg
tggtttccaccggagaggaggctcgccacagggttatttagtaaaaaact
gagatcacaccaaatgcccaacggtaggaagtcggcttgataaatgctgg
cacacacgtgggctgaaatgctctgtagctgtgctgtgctgtaaccactc
aggaaactaaaggccggaattcaggagttagggttcaggctggctggccc
atctctacaacagccttctgtggtctgtgcaagctttggagacaatttcc
tggtttgaggggcaatcacagaagctaccacatgccgtggtattgcgcat
gaacaacccgcctaacacatgcttcccatgggaggtcctctgtattcctg
aatggagggagggaagccacgtggaaagtgggactccaaacgccagtctg
gtgccagatttacaaaaaatatgaatatatgcattttttaaaactggaag
gaaacaccagattgttaatgatggttgtgtctggatgtgttttaaatttt
ccttctttagttttcaaatattctacaatgagtgtgaatttctataatcg
gggaattctttcacatttcacatactaccttgcagagtcctacagccttt
aacttttctcatgataatttgttctccacctgagtcttgaaatccccctc
cagaaactcagaaatttctcactataacaggcaggggtcctaccaggagt
atccaaccgtttgatgttgtgaccagacattgtcatctacaaagtttcac
acttgagaagtgagcaaaaagttacacacacacacactgaataaaaaatc
tcataactgttttaagtgagtatacgaattttgtgttgggccacattcat
tgccacccttagctgcattcggttcccaggctgcaggtggacatgacact
gtaagaacctactcatctttatgttatggatgaagaacagagaagtcaag
ttgctccccaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_152709716_152710829
seq2: B6Ng01-067A22.b_49_1145

seq1  GAATTCACCTACATACTATCCTTCAATAAGGATGATAAGAGGAAGGGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTACATACTATCCTTCAATAAGGATGATAAGAGGAAGGGAGG  50

seq1  GAACATCTGTCAGGTTGAGTGCTATCAACTGAGTTGAGCATAGAAAAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATCTGTCAGGTTGAGTGCTATCAACTGAGTTGAGCATAGAAAAACA  100

seq1  GGTTGTCTGCTTTGTCGGTTTCTAGTTGGGTTAGCACTTAAAGGTGACCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTCTGCTTTGTCGGTTTCTAGTTGGGTTAGCACTTAAAGGTGACCT  150

seq1  GGATGGTGGGGAACTAAGCAAGCGTTTGTGGTTTTGTTTTACAGGCTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGTGGGGAACTAAGCAAGCGTTTGTGGTTTTGTTTTACAGGCTTGT  200

seq1  TACCCTCCAAATCTGTGAACAAGATTGCACGAGACCCCCAGACCCCCATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCTCCAAATCTGTGAACAAGATTGCACGAGACCCCCAGACCCCCATA  250

seq1  CTGCAGACCAAATATCGTACAAGGGCTGTGACTTGCAAAAGTACTGCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGACCAAATATCGTACAAGGGCTGTGACTTGCAAAAGTACTGCAGA  300

seq1  GCAGGAGGCCGAGGAGCTTGAGAAACTGCAACAGTAGGTCCCACTGGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAGGCCGAGGAGCTTGAGAAACTGCAACAGTAGGTCCCACTGGCAG  350

seq1  TGTCTGAGAAAGGCTGGCCACTCCTGCCTGCCTGCTTTCAGTCCTGTTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGAGAAAGGCTGGCCACTCCTGCCTGCCTGCTTTCAGTCCTGTTGG  400

seq1  GCGGTGGTAACTGTTTTCCCTTTCATGAAAATGCAAGCCATTTAGTGGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGTGGTAACTGTTTTCCCTTTCATGAAAATGCAAGCCATTTAGTGGCT  450

seq1  GCGTAGGCTGTGCTCCTGTCTCTGTGACTGAAAATGGGACTATGTAGGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTAGGCTGTGCTCCTGTCTCTGTGACTGAAAATGGGACTATGTAGGTG  500

seq1  CCCTGGAGCAGAATCTGATGAGTCATCTGAAAGGATGACTTTGCTTTGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGAGCAGAATCTGATGAGTCATCTGAAAGGATGACTTTGCTTTGGT  550

seq1  TTTTTGTTTGCTTGCTTTTAAATTCTATTTGTGGAAGTTTTGCTTGCATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTTGCTTGCTTTTAAATTCTATTTGTGGAAGTTTTGCTTGCATG  600

seq1  CACCACTGGCATGCCTGTGCTCATGGAAGGCAGAAGAGGACTTTGGAGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACTGGCATGCCTGTGCTCATGGAAGGCAGAAGAGGACTTTGGAGCC  650

seq1  TCTAGAAATGGAGTTACAGATACGTGGTTGTTCGCTATCATGTGGGTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAAATGGAGTTACAGATACGTGGTTGTTCGCTATCATGTGGGTGTG  700

seq1  CTGGGGATTTTTGGGGAGTAGCAGCCAGTGCTTTATAAACCCCTGAGCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGATTTTTGGGGAGTAGCAGCCAGTGCTTTATAAACCCCTGAGCCA  750

seq1  TCTTTCCAGGCCCCCAAAGTTTGGGAACTTGAATTTCTGGTCCTCCTGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCAGGCCCCCAAAGTTTGGGAACTTGAATTTCTGGTCCTCCTGTC  800

seq1  TCTGCCACAGTGCGAGGATTATAGGCGCATGCACTCATAGAGCCTGGAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCACAGTGCGAGGATTATAGGCGCATGCACTCATAGAGCCTGGAGC  850

seq1  CCCGGGGGGACCCCAGGCCATGCCGTTCACCCTTTTCTCAGGAGGTGAAG  900
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CCCGGGGGGACCCCAGGCCATGCCGTTCACCCTTTTCTCA-GAGGTGAAG  899

seq1  ATGACTATGGAGAGGAGAGATCATGCTGTCCATGGTGGATCATCTTAGCG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTATGGAGAGGAGAGATCATGCTGTCCATGGTGGATCATCTTAGCG  949

seq1  CTTCTACTTTGTTCTACGTTGTGTACTTTTTATTTAATTTAAAAAGCCTT  1000
      ||||||||||| |||||| ||||||| |||||||||||||||||   |||
seq2  CTTCTACTTTG-TCTACG-TGTGTAC-TTTTATTTAATTTAAAA--GCTT  994

seq1  TTATGTTTATTACTTTTTGTGTTTGTTACAGATACAAATTCAAAGCACGG  1050
      ||||||||| ||| |||||||||   || |||||||||||  ||||||||
seq2  TTATGTTTA-TAC-TTTTGTGTT--GTAAAGATACAAATTTCAAGCACGG  1040

seq1  GAACTTGATCCTAGAATTTTTGAAAGTGGCCCCATCTTGCCCAAGAGAGC  1100
        ||||||||| |||| |||||||||| || ||||||   ||||||||||
seq2  --ACTTGATCC-AGAA-TTTTGAAAGT-GCTCCATCT--GCCAAGAGAGC  1083

seq1  ACCTGTTAAACCTC  1114
      ||||||||||||||
seq2  ACCTGTTAAACCTC  1097

seq1: chr2_152828882_152829943
seq2: B6Ng01-067A22.g_67_1128 (reverse)

seq1  CTTGGGTGAGCAACTTGACCTCTCTGTTCTTCATCCATAACATAAAGATG  50
      |||||| |||||||||||| ||||||||||||||||||||||||||||||
seq2  CTTGGG-GAGCAACTTGACTTCTCTGTTCTTCATCCATAACATAAAGATG  49

seq1  AGTAGTATCTTACAGGTGTCATGTCCAACCTGCAGCCTGGGAACCGAATG  100
      |||||  ||||||| ||||||||||| |||||||||||||||||||||||
seq2  AGTAGGTTCTTACA-GTGTCATGTCC-ACCTGCAGCCTGGGAACCGAATG  97

seq1  CAGCTAAGGGTGGCAATGAATGTGGCCCAACACAAAA-TCGTATACTCAC  149
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CAGCTAAGGGTGGCAATGAATGTGGCCCAACACAAAATTCGTATACTCAC  147

seq1  TTAAAACAGTTATGAGATTTTTTATTCAGTGTGTGTGTGTGTAACTTTTT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAACAGTTATGAGATTTTTTATTCAGTGTGTGTGTGTGTAACTTTTT  197

seq1  GCTCACTTCTCAAGTGTG-AACTTTGTAGATGACAATGTCTGGTCACAAC  248
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GCTCACTTCTCAAGTGTGAAACTTTGTAGATGACAATGTCTGGTCACAAC  247

seq1  ATCAAACGGTTGGATACTCCTGGTAGGA-CCCTGCCTGTTATAGTGAGAA  297
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  ATCAAACGGTTGGATACTCCTGGTAGGACCCCTGCCTGTTATAGTGAGAA  297

seq1  ATTTCTGAGTTTCTGGAGGGGGATTTCAAGACTCAGGTGGAGAACAAATT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGAGTTTCTGGAGGGGGATTTCAAGACTCAGGTGGAGAACAAATT  347

seq1  ATCATGAGAAAAGTTAAAGGCTGTAGGACTCTGCAAGGTAGTATGTGAAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGAGAAAAGTTAAAGGCTGTAGGACTCTGCAAGGTAGTATGTGAAA  397

seq1  TGTGAAAGAATTCCCCGATTATAGAAATTCACACTCATTGTAGAATATTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAAGAATTCCCCGATTATAGAAATTCACACTCATTGTAGAATATTT  447

seq1  GAAAACTAAAGAAGGAAAATTTAAAACACATCCAGACACAACCATCATTA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACTAAAGAAGGAAAATTTAAAACACATCCAGACACAACCATCATTA  497

seq1  ACAATCTGGTGTTTCCTTCCAGTTTTAAAAAATGCATATATTCATATTTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCTGGTGTTTCCTTCCAGTTTTAAAAAATGCATATATTCATATTTT  547

seq1  TTGTAAATCTGGCACCAGACTGGCGTTTGGAGTCCCACTTTCCACGTGGC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAATCTGGCACCAGACTGGCGTTTGGAGTCCCACTTTCCACGTGGC  597

seq1  TTCCCTCCCTCCATTCAGGAATACAGAGGACCTCCCATGGGAAGCATGTG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTCCCTCCATTCAGGAATACAGAGGACCTCCCATGGGAAGCATGTG  647

seq1  TTAGGCGGGTTGTTCATGCGCAATACCACGGCATGTGGTAGCTTCTGTGA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGCGGGTTGTTCATGCGCAATACCACGGCATGTGGTAGCTTCTGTGA  697

seq1  TTGCCCCTCAAACCAGGAAATTGTCTCCAAAGCTTGCACAGACCACAGAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCCCTCAAACCAGGAAATTGTCTCCAAAGCTTGCACAGACCACAGAA  747

seq1  GGCTGTTGTAGAGATGGGCCAGCCAGCCTGAACCCTAACTCCTGAATTCC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTTGTAGAGATGGGCCAGCCAGCCTGAACCCTAACTCCTGAATTCC  797

seq1  GGCCTTTAGTTTCCTGAGTGGTTACAGCACAGCACAGCTACAGAGCATTT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTTAGTTTCCTGAGTGGTTACAGCACAGCACAGCTACAGAGCATTT  847

seq1  CAGCCCACGTGTGTGCCAGCATTTATCAAGCCGACTTCCTACCGTTGGGC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCACGTGTGTGCCAGCATTTATCAAGCCGACTTCCTACCGTTGGGC  897

seq1  ATTTGGTGTGATCTCAGTTTTTTACTAAATAACCCTGTGGCGAGCCTCCT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGTGTGATCTCAGTTTTTTACTAAATAACCCTGTGGCGAGCCTCCT  947

seq1  CTCCGGTGGAAACCACGGAAGTTGGCTTTTCCTTCTGGCTCCCTGGAAGT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCGGTGGAAACCACGGAAGTTGGCTTTTCCTTCTGGCTCCCTGGAAGT  997

seq1  AGAAGAATCACTGAGCAGCAGGCATAGGCTTACTTAGAAAGAGGCCCAAG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAATCACTGAGCAGCAGGCATAGGCTTACTTAGAAAGAGGCCCAAG  1047

seq1  CCCCTTAGTGAATTC  1062
      |||||||||||||||
seq2  CCCCTTAGTGAATTC  1062