BAC Information

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BAC

Clone NameB6Ng01-067B02
Chromosome2 (Build37)
Map Location 89,130,115 - 89,131,183
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr1174, Olfr1175, Olfr1176, Olfr1177, Olfr1178, Olfr1179, Olfr1180, Olfr1181, Olfr1182, Olfr1183, Olfr1184, Olfr1185-ps1, Olfr1186, Olfr1187-ps1, Olfr1188, LOC668528, Olfr1189, GA_x5J8B7W4NS2-37772-38277, Olfr475-ps1, Olfr526-ps1, Olfr1192-ps1, Olfr1193, Olfr1194-ps1, Olfr1195, Olfr1196, Olfr1197, Olfr1198, Olfr1199, Olfr1200, Olfr1201, Olfr1202, Olfr1203, Olfr1204, Olfr1206, Olfr1208, Olfr1209, Olfr1211, Olfr1212, Olfr1213, Olfr1214, Olfr1215, Olfr1216, Olfr1217, Olfr1218, Olfr1219, Olfr1220, Olfr1221, Olfr1222, Olfr1223, Olfr1224-ps1, Olfr1225, LOC435676, Olfr1226, LOC100042983, GA_x5J8B7TTH1T-1160-261, Olfr1227-ps1, Olfr1228, Olfr1229
Downstream geneOlfr1230, Olfr1231, Olfr1232, Olfr1233, Olfr1234, Olfr1235-ps1, GA_x5J8B7W62NC-668773-668438, Olfr1237-ps1, Olfr1238, Olfr1239, Olfr1240, Olfr1241, Olfr1242, Olfr1243, Olfr1244-ps1, Olfr1245, Olfr1246, Olfr1247, Olfr1248, Olfr1249, Olfr1541-ps1, Olfr1250, Olfr1251, GA_x5J8B7TT7VM-20-924, Olfr1252, GA_x5J8B7W62NC-992588-991951, Olfr1253-ps1, Olfr1254, Olfr1255, Olfr1256, Olfr48, Olfr1257, Olfr1258, Olfr1259, Olfr1260, Olfr1261, Olfr1262, Olfr1263, Olfr1264, Olfr1265, Olfr140, Olfr1266-ps1, Olfr1267-ps1, Olfr1268-ps1, Olfr1269, Olfr32, LOC100043090, Olfr1270, LOC627525, LOC100043096, Olfr1506, Olfr142, Olfr1271, Olfr1272
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067B02.bB6Ng01-067B02.g
ACCDH886068DH886069
length1,1441,059
definitionDH886068|Mus musculus domesticus DNA, BAC clone: B6Ng01-067B02, 5' end.DH886069|Mus musculus domesticus DNA, BAC clone: B6Ng01-067B02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattctttttaatagctgagtagtactccattgtgtaaatgtacc
acgttttttgtatccattcctctgttgaggggcatctgggttctttccag
cttctggctattataaataaggctgctatgaacatagtggagcatgtgtc
cttcttaccagttgggacatcttctggatatatgcccaggagaggtattg
ctagatcctccggtagtactatgtccaattttctgaggaaccaccagact
gatttccagagtggttgtacaagcttgcaatcccaccaacaatggaggag
tgttcctctttctccacatccttgccaacatctgctgtcacctgaatttt
tgatcttagccattctgactggtgtgagatggaatctcagggttattttg
atttgcatttctcttatgattaaggatgttgaacattttttttcaggtgt
ttctcagccttttggtattcctcgggtgagaattctttgttcagctctga
accccatcttttaagggggttatttgattttctggagtccaccctcttga
gttctttatatatattggatattagtcccctatctgatttaagataggta
aagatcctttcccaatctgttggtggtctttttgtcttattgatggtgtc
ttttgccttggagaagctttgcagtttcatgaggccccatttgtcaatcc
tagatcttacagcacaagcattgctgttctattcaggaattttttccctg
tgcccatatctttgagacttttccccactttctcctctataagtttcagt
gtctctggttttatgtgaagttccttgatccacttagatttgaccacagg
acttaggatcccatggagtatcctgtgtgggtccttgtgggtgtccgtag
actctcccccccccccgggccaggaaccccagtgctgcagtgggcaggcc
ggaaaggacttgagccccaaatcagtcagtacctacttccttaataatgc
agtctcaagtactgtgcgatggatgagtagcgctgtgttccactcaccaa
aggactagaaccataccggatctgtgtggtctgagtgttgaaactccctg
ccaggaaccatggtgttggtgctcaaggggcggtggaaatcaga
gaattctatagaacaaaataaattacagaggaatgagaatatctctctgt
ggaaacttactatgtattttttcatgatataaatgatggtgagagatttt
cagttagtgggaaagtgttggtattggataaagtttaaaataattaatgg
ctctctcttcacttacagtttctttctttctttctttctttctttctttc
tgtcttttttctttctctctctctttctttctttttctttttttttcttt
tctttacttcttcttttttttgaaaaggaaagtagatttattcacttgac
tatattggaaagagaggcagagatccagtcacctccttaagcccatccac
ctccaggttcctgatatggtgtttaatcagaaagcaaaagatctgtgtaa
ctaagctacccattcagaatgtagtccctagaccactgctgtctaagctc
caagtctccctggcaaggtcatctgacaagttgtcagtaatttacaagag
ataacttactcttcttccccgtgacttcggacttctttttctccagcaag
tgattcttggggtccatccgtttcatagtctgaaagcttaagagtgtctc
tatgaagtatatccatccctgtcggataggcagttgcaatcgaaggggaa
ccaatatggtggagattaagcaggcaagttccaaaggggggtaacagtga
gagaacaggagcccacttactcttgaggaatcccagaagaaactggtatc
accatcaagagaagagggtcaagtgctgggctccatgagggacacgatgc
ccagaatttccacagatattgtaagacctgaagtcacctagttcccctgc
ccaagtctgttcttgattccctgttcccaattcatttgtcagggtatccc
tgttataactgtacagatgttcacaggtaagaatgacacaatgcttcact
tatgtcatagcagcttatttataatagccagagctggaaaggacccagat
gccctcaacagaggaatggaaccagaaaagtggtactttacccatgggtc
tactcagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_89130115_89131183
seq2: B6Ng01-067B02.g_65_1123 (reverse)

seq1  AGCTGAGTAGTACTCCATTGTGTAAATGTACCACTTTTTCTGTATCCATT  50
      |||||||||| || ||| || ||||| ||||||| |||||||  ||||||
seq2  AGCTGAGTAG-AC-CCA-TGGGTAAA-GTACCAC-TTTTCTGGTTCCATT  45

seq1  CCTCTGTTGAGGGGCATCTGGGTCCTTTCCAGCTTCTGGCTATTATAAAT  100
      |||||||||| |||||||||||||||||||||| ||||||||||||||||
seq2  CCTCTGTTGA-GGGCATCTGGGTCCTTTCCAGC-TCTGGCTATTATAAAT  93

seq1  AAGGCTGCTATGAACAT-AGTGGAGCA-TGTGTCCTTCTTACCTGTTGGA  148
      || ||||||||| |||| |||| |||| |||||| |||||||||||  ||
seq2  AA-GCTGCTATG-ACATAAGTGAAGCATTGTGTCATTCTTACCTGT--GA  139

seq1  ACATCTGTACAGTTTATACAGGGATACCCTTGACAAAATGAATTGGGAAC  198
      ||||||||||||||   |||||||||||| |||| |||||||||||||||
seq2  ACATCTGTACAGTTATAACAGGGATACCC-TGAC-AAATGAATTGGGAAC  187

seq1  AGGGAATCAAGAACAGACTTGGGCAGGGGAACTAGGTGACTTCAGGTCTT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAATCAAGAACAGACTTGGGCAGGGGAACTAGGTGACTTCAGGTCTT  237

seq1  ACAATATCTGTGGAAATTCTGGGCATCGTGTCCCTCATGGAGCCCAGCAC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATATCTGTGGAAATTCTGGGCATCGTGTCCCTCATGGAGCCCAGCAC  287

seq1  TTGACCCTCTTCTCTTGATGGTGATACCAGTTTCTTCTGGGATTCCTCAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCCTCTTCTCTTGATGGTGATACCAGTTTCTTCTGGGATTCCTCAA  337

seq1  GAGTAAGTGGGCTCCTGTTCTCTCACTGTTA-CCCCCTTTGGAACTTGCC  397
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GAGTAAGTGGGCTCCTGTTCTCTCACTGTTACCCCCCTTTGGAACTTGCC  387

seq1  TGCTTAATCTCCACCATATTGGTTCCCCTTCGATTGCAACTGCCTATCCG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTAATCTCCACCATATTGGTTCCCCTTCGATTGCAACTGCCTATCCG  437

seq1  ACAGGGATGGATATACTTCATAGAGACACTCTTAAGCTTTCAGACTATGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGATGGATATACTTCATAGAGACACTCTTAAGCTTTCAGACTATGA  487

seq1  AACGGATGGACCCCAAGAATCACTTGCTGGAGAAAAAGAAGTCCGAAGTC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGGATGGACCCCAAGAATCACTTGCTGGAGAAAAAGAAGTCCGAAGTC  537

seq1  ACGGGGAAGAAGAGTAAGTTATCTCTTGTAAATTACTGACAACTTGTCAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGGGAAGAAGAGTAAGTTATCTCTTGTAAATTACTGACAACTTGTCAG  587

seq1  ATGACCTTGCCAGGGAGACTTGGAGCTTAGACAGCAGTGGTCTAGGGACT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCTTGCCAGGGAGACTTGGAGCTTAGACAGCAGTGGTCTAGGGACT  637

seq1  ACATTCTGAATGGGTAGCTTAGTTACACAGATCTTTTGCTTTCTGATTAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCTGAATGGGTAGCTTAGTTACACAGATCTTTTGCTTTCTGATTAA  687

seq1  ACACCATATCAGGAACCTGGAGGTGGATGGGCTTAAGGAGGTGACTGGAT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCATATCAGGAACCTGGAGGTGGATGGGCTTAAGGAGGTGACTGGAT  737

seq1  CTCTGCCTCTCTTTCCAATATAGTCAAGTGAATAAATCTACTTTCCTTTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCCTCTCTTTCCAATATAGTCAAGTGAATAAATCTACTTTCCTTTT  787

seq1  CAAAAAAAAGAAGAAGTAAAGAAAAGAAAAAAAAAGAAAAAGAAAGAAAG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAAAAGAAGAAGTAAAGAAAAGAAAAAAAAAGAAAAAGAAAGAAAG  837

seq1  AGAGAGAGAAAGAAAAAAGACAGAAAGAAAGAAAGAAAGAAAGAAAGAAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAAAGAAAAAAGACAGAAAGAAAGAAAGAAAGAAAGAAAGAAA  887

seq1  GAAACTGTAAGTGAAGAGAGAGCCATTAATTATTTTAAACTTTATCCAAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTGTAAGTGAAGAGAGAGCCATTAATTATTTTAAACTTTATCCAAT  937

seq1  ACCAACACTTTCCCACTAACTGAAAATCTCTCACCATCATTTATATCATG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACACTTTCCCACTAACTGAAAATCTCTCACCATCATTTATATCATG  987

seq1  AAAAAATACATAGTAAGTTTCCACAGAGAGATATTCTCATTCCTCTGTAA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATACATAGTAAGTTTCCACAGAGAGATATTCTCATTCCTCTGTAA  1037

seq1  TTTATTTTGTTCTATAGAATTC  1069
      ||||||||||||||||||||||
seq2  TTTATTTTGTTCTATAGAATTC  1059