BAC Information

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BAC

Clone NameB6Ng01-067I16
Chromosome2 (Build37)
Map Location 50,505,887 - 50,507,083
singlet/doubletsinglet
Overlap genenone
Upstream geneKif5c, 2310010M24Rik, Lypd6, 2010311D03Rik, LOC666781
Downstream geneLOC227885, Rnd3, LOC666802, LOC666810, LOC100041614, Tas2r134
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067I16.bB6Ng01-067I16.g
ACCDH886399DH886400
length1,1811,068
definitionDH886399|Mus musculus domesticus DNA, BAC clone: B6Ng01-067I16, 5' end.DH886400|Mus musculus domesticus DNA, BAC clone: B6Ng01-067I16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagtacaattaatgactgcttaaagatttcatacacagaaacac
gacttcttttatataaagatgcttttaagaacatcaggtggcaggggctg
gagaaatggcacagaggtttactacacagacttttctgtcagaggtcctg
agttcaattcccagccaccatatggtggctcacaaccaactataatggga
tcgatgccctcttgtggtgtgtctgaaaacagctacagtatactcacata
aactaagtaaatatttaaaaaaaagagagagaacaacaggtagcaataaa
tcataagtaaagactttctagctataaaccttagcagtagttgtacctga
tcaattgtaatcctgttcaaggcaccttcagaggctcacctatcaaaagg
agggagaagatgtttcatagcgactgagacataacttgcttgagagtcac
caaaatgatatgttactatgccccacacgcatgcttctcccttgataaac
tcacatccacacttgggtgttccttaacctttctattaaccttcatgcat
aaatgtttgttaagctttctatctgatcaaggggcaggggccgagggcat
cacctctatgcccagccaccctatggcagatgagtggcagggtcagctct
cccacactcgtgccatcagataaggctcacccataccctcaccatcaggg
ctagctccatggtgctgccttgggattgattgctaaaacccagtgcagaa
tcaataatgactgatgaagaaggtgggtcaatgaagatgtgaagcacaaa
caaattccattctgattttgggaaaaacaatattcaaaagagaccaaatt
ttaaatattagaaagcagttactatgtaggcatatttatatttaatgcat
gccacattttaagaatatttattctccataaaagtgatatcattggaata
aaatatttattcccacccttgtgtgaggaatttcagcatcatttcttctt
attctcaagggaagtaaagcttcatcagataggactgcctaactctgttt
aatatcatcttaaaataaaacatagccaaaacaaactaaatatatggaag
aaaaactcaaaaagacatttaataaatcagctaggacttttctttaaaca
tttttctgcttctggactctagttccggcaa
gaattcctgatctttccaagacttttatcatgaatgagtgttggattttg
tcgaatgctttctcagcatctaacaagatgatcatgtggtttttgtcttt
gagtttgtttatatagtggattacattgatggatttctgtatattgaacc
atccctgcattcctggaatgaaacctacttgatcagatggataactgttt
tgaagtgttcttggattaggttagcgagaattttattgaggattttttca
tcgatattcagaagggaaattggtctgaagttctctatctttcttgggtc
tttctgtggtttaggtatcagagttattgtggcttcataggatgaattgg
gtagtgtaccttctgcttctattttgtggaatagtttgtgaagaactgga
attagatcttctttgaaggtctaaatagaactctgcactaaacccatctg
gtcctgggctttttttttggttgggagactattaatgactgcttctattt
ctttagtggatataggactgtttagatcattaacctaatcctgatttaac
tttggtacctgggatctgtgtagaaacttgttcatttcatccaggctttc
cagttttgttgagtatagccttttttagaaggatctgatggtgtttttgg
atttcttcaggatctgttgttatgtctcccttttcatttcttattttgtt
aattaggatgctgtccctgtgccctctagtgattctggctaagggtttat
ctatcttgttgattttctcaaagaaccagctcctcgattggttgattctt
tgaatagttcttcttgttttcacttggttgatttcgcccctgagtttgat
tatttcctgctgtctactcctctgggtgaatttgtttccttttttccaga
gcttttagtttgttgtcaagctgctactgtgtgctcttctagtttcttat
ggagccactcagagcatgagttccctctggaaatgcttccatgtgtccaa
aatttggtatgtgtggctccatcattaaactctaaagtcttatatttctt
tttattcttcctgtacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_50505887_50507083
seq2: B6Ng01-067I16.b_49_1229 (reverse)

seq1  TTGCCGTGAACTAGAGTCCCAAGAAGGCAGAAAAAATGTTTATATGGAAA  50
      |||||| ||||||||||||  |||| |||| ||||||||||| |    ||
seq2  TTGCCG-GAACTAGAGTCC--AGAA-GCAG-AAAAATGTTTAAA---GAA  42

seq1  AAGTCCTAGCTTGATTTAATTTATAATGTCTTTTTTTGAGTATTATCTTT  100
      |||||||||| |||||||  ||| ||||||  ||||||||| || |||| 
seq2  AAGTCCTAGC-TGATTTA--TTA-AATGTC--TTTTTGAGT-TTTTCTTC  85

seq1  CATTATATTTAGTTTTGTTTTTGCTATTGTTTTATTTT-AGATGATATTA  149
      || ||||||||| |||||||| |||| ||||||||||| |||||||||||
seq2  CA-TATATTTAG-TTTGTTTTGGCTA-TGTTTTATTTTAAGATGATATTA  132

seq1  TACAGAGTTAGGCAGTCCTATCTGATGAAGCTTTACTTCCCTTGGGAAT-  198
       ||||||||||||||||||||||||||||||||||||||||||| |||| 
seq2  AACAGAGTTAGGCAGTCCTATCTGATGAAGCTTTACTTCCCTTGAGAATA  182

seq1  AGAAGAAATGATGCTGAAATTCCTCACACAAGGGTGGGAATAAATATTTT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAATGATGCTGAAATTCCTCACACAAGGGTGGGAATAAATATTTT  232

seq1  ATTCCAATGATATCACTTTTATGGAGAATAAATATTCTTAAAATGTGGCA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAATGATATCACTTTTATGGAGAATAAATATTCTTAAAATGTGGCA  282

seq1  TGCATTAAATATAAATATGCCTACATAGTAACTGCTTTCTAATATTTAAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTAAATATAAATATGCCTACATAGTAACTGCTTTCTAATATTTAAA  332

seq1  ATTTGGTCTCTTTTGAATATTGTTTTTCCCAAAATCAGAATGGAATTTGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGTCTCTTTTGAATATTGTTTTTCCCAAAATCAGAATGGAATTTGT  382

seq1  TTGTGCTTCACATCTTCATTGACCCACCTTCTTCATCAGTCATTATTGAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCTTCACATCTTCATTGACCCACCTTCTTCATCAGTCATTATTGAT  432

seq1  TCTGCACTGGGTTTTAGCAATCAATCCCAAGGCAGCACCATGGAGCTAGC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCACTGGGTTTTAGCAATCAATCCCAAGGCAGCACCATGGAGCTAGC  482

seq1  CCTGATGGTGAGGGTATGGGTGAGCCTTATCTGATGGCACGAGTGTGGGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATGGTGAGGGTATGGGTGAGCCTTATCTGATGGCACGAGTGTGGGA  532

seq1  GAGCTGACCCTGCCACTCATCTGCCATAGGGTGGCTGGGCATAGAGGTGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGACCCTGCCACTCATCTGCCATAGGGTGGCTGGGCATAGAGGTGA  582

seq1  TGCCCTCGGCCCCTGCCCCTTGATCAGATAGAAAGCTTAACAAACATTTA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTCGGCCCCTGCCCCTTGATCAGATAGAAAGCTTAACAAACATTTA  632

seq1  TGCATGAAGGTTAATAGAAAGGTTAAGGAACACCCAAGTGTGGATGTGAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGAAGGTTAATAGAAAGGTTAAGGAACACCCAAGTGTGGATGTGAG  682

seq1  TTTATCAAGGGAGAAGCATGCGTGTGGGGCATAGTAACATATCATTTTGG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCAAGGGAGAAGCATGCGTGTGGGGCATAGTAACATATCATTTTGG  732

seq1  TGACTCTCAAGCAAGTTATGTCTCAGTCGCTATGAAACATCTTCTCCCTC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCTCAAGCAAGTTATGTCTCAGTCGCTATGAAACATCTTCTCCCTC  782

seq1  CTTTTGATAGGTGAGCCTCTGAAGGTGCCTTGAACAGGATTACAATTGAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGATAGGTGAGCCTCTGAAGGTGCCTTGAACAGGATTACAATTGAT  832

seq1  CAGGTACAACTACTGCTAAGGTTTATAGCTAGAAAGTCTTTACTTATGAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTACAACTACTGCTAAGGTTTATAGCTAGAAAGTCTTTACTTATGAT  882

seq1  TTATTGCTACCTGTTGTTCTCTCTCTTTTTTTTAAATATTTACTTAGTTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGCTACCTGTTGTTCTCTCTCTTTTTTTTAAATATTTACTTAGTTT  932

seq1  ATGTGAGTATACTGTAGCTGTTTTCAGACACACCACAAGAGGGCATCGAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAGTATACTGTAGCTGTTTTCAGACACACCACAAGAGGGCATCGAT  982

seq1  CCCATTATAGTTGGTTGTGAGCCACCATATGGTGGCTGGGAATTGAACTC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTATAGTTGGTTGTGAGCCACCATATGGTGGCTGGGAATTGAACTC  1032

seq1  AGGACCTCTGACAGAAAAGTCTGTGTAGTAAACCTCTGTGCCATTTCTCC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCTCTGACAGAAAAGTCTGTGTAGTAAACCTCTGTGCCATTTCTCC  1082

seq1  AGCCCCTGCCACCTGATGTTCTTAAAAGCATCTTTATATAAAAGAAGTCG  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCTGCCACCTGATGTTCTTAAAAGCATCTTTATATAAAAGAAGTCG  1132

seq1  TGTTTCTGTGTATGAAATCTTTAAGCAGTCATTAATTGTACTGGAATTC  1197
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTGTGTATGAAATCTTTAAGCAGTCATTAATTGTACTGGAATTC  1181