BAC Information

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BAC

Clone NameB6Ng01-067L24
Chromosome2 (Build37)
Map Location 108,616,665 - 108,753,887
singlet/doubletdoublet
Overlap geneLOC100043423
Upstream geneLOC100043078, LOC668790, LOC623003
Downstream geneLOC623031, Mett5d1, Kif18a, Bdnf, LOC100043427, Lin7c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067L24.bB6Ng01-067L24.g
ACCDH886538DH886539
length8011,154
definitionDH886538|Mus musculus domesticus DNA, BAC clone: B6Ng01-067L24, 5' end.DH886539|Mus musculus domesticus DNA, BAC clone: B6Ng01-067L24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(108,753,089 - 108,753,887)(108,616,665 - 108,617,840)
sequence
gaattcctcagacattctgaatgcttgaggatgtattcaggcatttcatc
aatgctacttagtccaagtaatataattcttgattctagcacaaatagac
tcctggcattgtgccagaaaaattactgagtgaaagacagaggtgaagac
acaggtgaccagactggaggctatttgaactacctggcaaccttaaggtt
aaaaaaggacaggggttgtggtttctgctgccctttgtggccatcaggga
gctttgtggcacatgatcagtgccctgctggacccctgtggttcttggtt
ctttcctccttcagttaatagtttctgcagtgaaatagtattaaaggaaa
gccaagatacttcatgtgtgtgaataagtgactgaataagatttgaaact
gacgcttagagagttttctggttctctagatgaccttgaatttggttctg
gtatgtatattctatatctttaaaacctggcctttcaagagtatgtggca
tatgattaaaattgcaggatttatctcaatgtttcttggccaattacttt
catgactttcttgtcttttccatgaatgaaagtctttctatgtagctgac
agtgggatcagagaagcaccatcacaattaattttatgtcctgcattcag
gtgggtatagagggtaagatgtgggagataagatttagtcattttggttt
ttgttcttggatattttaagggagtctgaggataaaagagacaaacttaa
caactaggggtacagtttgcaaacagtatgggtaaaagcttcatcagagg
t
gaattcaggaagctactggagcagctcccgacacctctagactcttgaga
agtacaaatcattgatcccagcatcttcagactgataatatacagacaca
tgcagtgtagacagttcagggatgaatgacatgactgatatgagacaagc
aacctagaaaagtagacgtggagctggggatgcaagaatcagaatgggta
ccaggaaaagggtatgatacttactgggttttgctttggggagctctgca
gaaagcagtgtttactatagtctatgtgcccaaatctcttcatttttttt
aaaggaaacatgtgccttccacatttttgtggaattcacttgtgcattct
ctttttccaaggtataaaaagagaatggaataaagcctaccatggccaca
gatggatctcatacataaaaagtatggtctgtagcaaatgttcttggttt
ccctgttcatattgataatgccaatagcttgctagtgcaagcagctcatg
actttggcctaggggctttcttctgttacatggtgatggacagaagagac
agtataaagctgacagagaatgaaactccaccatagaagcacctgaggaa
acatggacaagcattgcagcttccccatcctccacatacaacaaatctga
agcagttgcctcttgtttcccaggagcatctccaatataaaccagcaact
acccagagcagtaacctctgtagacaacattgtattgtactccttccccc
acctacatgtttttcccgagagcaatgctagaaactgtatgaagggctcg
gaatgaatttcatcattgactttcactctgaagttttataccttgaagat
ggaatctacggctcaatcccttcaggatttcctctcaggagcctctgatc
caattgaacacatcttccttctgccgctttcctcaacatcagcaggaaat
tcactcaataagacttcttttactctgcattgtcatcacgtgctgatctg
gttttacttcagaaacttctcgagctgtattattaaagtagtgactttca
agtattttctcctcagtataatataaaccaccaggtactcactgccatcc
atgagtagtctattatatgtcttatcggagaggtttcaccttacactcag
gata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_108753089_108753887
seq2: B6Ng01-067L24.b_48_848 (reverse)

seq1  ACCTCTGATGAAGCTTTTTACCATACTGTCTGCAAACTGT-TCCCTAGTT  49
      ||||||||||||||||||  ||||||||| ||||||||||  ||||||||
seq2  ACCTCTGATGAAGCTTTTACCCATACTGTTTGCAAACTGTACCCCTAGTT  50

seq1  GTTAAGTTTGTCTCTTTTATCCTCAGACTCCCTTAAAATATCCAAGAACA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGTTTGTCTCTTTTATCCTCAGACTCCCTTAAAATATCCAAGAACA  100

seq1  AAAACC-AAATGACTAAATCTTATCTCCCACATCTTACCCTCTATACCCA  148
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCAAAATGACTAAATCTTATCTCCCACATCTTACCCTCTATACCCA  150

seq1  CCTGAATGCAGGACATAAAATTAATTGTGATGGTGCTTCTCTGATCCCAC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAATGCAGGACATAAAATTAATTGTGATGGTGCTTCTCTGATCCCAC  200

seq1  TGTCAGCTACATAGAAAGACTTTCATTCATGGAAAAGACAAGAAAGTCAT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGCTACATAGAAAGACTTTCATTCATGGAAAAGACAAGAAAGTCAT  250

seq1  GAAAGTAATTGGCCAAGAAACATTGAGATAAATCCTGCAATTTTAATCAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTAATTGGCCAAGAAACATTGAGATAAATCCTGCAATTTTAATCAT  300

seq1  ATGCCACATACTCTTGAAAGGCCAGGTTTTAAAGATATAGAATATACATA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCACATACTCTTGAAAGGCCAGGTTTTAAAGATATAGAATATACATA  350

seq1  CCAGAACCAAATTCAAGGTCATCTAGAGAACCAGAAAACTCTCTAAGCGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAACCAAATTCAAGGTCATCTAGAGAACCAGAAAACTCTCTAAGCGT  400

seq1  CAGTTTCAAATCTTATTCAGTCACTTATTCACACACATGAAGTATCTTGG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTCAAATCTTATTCAGTCACTTATTCACACACATGAAGTATCTTGG  450

seq1  CTTTCCTTTAATACTATTTCACTGCAGAAACTATTAACTGAAGGAGGAAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTTTAATACTATTTCACTGCAGAAACTATTAACTGAAGGAGGAAA  500

seq1  GAACCAAGAACCACAGGGGTCCAGCAGGGCACTGATCATGTGCCACAAAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCAAGAACCACAGGGGTCCAGCAGGGCACTGATCATGTGCCACAAAG  550

seq1  CTCCCTGATGGCCACAAAGGGCAGCAGAAACCACAACCCCTGTCCTTTTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTGATGGCCACAAAGGGCAGCAGAAACCACAACCCCTGTCCTTTTT  600

seq1  TAACCTTAAGGTTGCCAGGTAGTTCAAATAGCCTCCAGTCTGGTCACCTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTTAAGGTTGCCAGGTAGTTCAAATAGCCTCCAGTCTGGTCACCTG  650

seq1  TGTCTTCACCTCTGTCTTTCACTCAGTAATTTTTCTGGCACAATGCCAGG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTCACCTCTGTCTTTCACTCAGTAATTTTTCTGGCACAATGCCAGG  700

seq1  AGTCTATTTGTGCTAGAATCAAGAATTATATTACTTGGACTAAGTAGCAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTATTTGTGCTAGAATCAAGAATTATATTACTTGGACTAAGTAGCAT  750

seq1  TGATGAAATGCCTGAATACATCCTCAAGCATTCAGAATGTCTGAGGAATT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGAAATGCCTGAATACATCCTCAAGCATTCAGAATGTCTGAGGAATT  800

seq1  C  799
      |
seq2  C  801

seq1: chr2_108616665_108617840
seq2: B6Ng01-067L24.g_67_1220

seq1  GAATTCAGGAAGCTACTGGAGCAGCTCCCGACACCTCTAGACTCTTGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGAAGCTACTGGAGCAGCTCCCGACACCTCTAGACTCTTGAGA  50

seq1  AGTACAAATCATTGATCCCAGCATCTTCAGACTGATAATATACAGACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACAAATCATTGATCCCAGCATCTTCAGACTGATAATATACAGACACA  100

seq1  TGCAGTGTAGACAGTTCAGGGATGAATGACATGACTGATATGAGACAAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTGTAGACAGTTCAGGGATGAATGACATGACTGATATGAGACAAGC  150

seq1  AACCTAGAAAAGTAGACGTGGAGCTGGGGATGCAAGAATCAGAATGGGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTAGAAAAGTAGACGTGGAGCTGGGGATGCAAGAATCAGAATGGGTA  200

seq1  CCAGGAAAAGGGTATGATACTTACTGGGTTTTGCTTTGGGGAGCTCTGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAAAAGGGTATGATACTTACTGGGTTTTGCTTTGGGGAGCTCTGCA  250

seq1  GAAAGCAGTGTTTACTATAGTCTATGTGCCCAAATCTCTTCATTTTTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCAGTGTTTACTATAGTCTATGTGCCCAAATCTCTTCATTTTTTTT  300

seq1  AAAGGAAACATGTGCCTTCCACATTTTTGTGGAATTCACTTGTGCATTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAACATGTGCCTTCCACATTTTTGTGGAATTCACTTGTGCATTCT  350

seq1  CTTTTTCCAAGGTATAAAAAGAGAATGGAATAAAGCCTACCATGGCCACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCCAAGGTATAAAAAGAGAATGGAATAAAGCCTACCATGGCCACA  400

seq1  GATGGATCTCATACATAAAAAGTATGGTCTGTAGCAAATGTTCTTGGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGATCTCATACATAAAAAGTATGGTCTGTAGCAAATGTTCTTGGTTT  450

seq1  CCCTGTTCATATTGATAATGCCAATAGCTTGCTAGTGCAAGCAGCTCATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTTCATATTGATAATGCCAATAGCTTGCTAGTGCAAGCAGCTCATG  500

seq1  ACTTTGGCCTAGGGGCTTTCTTCTGTTACATGGTGATGGACAGAAGAGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGGCCTAGGGGCTTTCTTCTGTTACATGGTGATGGACAGAAGAGAC  550

seq1  AGTATAAAGCTGACAGAGAATGAAACTCCACCATAGAAGCACCTGAGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATAAAGCTGACAGAGAATGAAACTCCACCATAGAAGCACCTGAGGAA  600

seq1  ACATGGACAAGCATTGCAGCTTCCCCATCCTCCACATACAACAAATCTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGACAAGCATTGCAGCTTCCCCATCCTCCACATACAACAAATCTGA  650

seq1  AGCAGTTGCCTCTTGTTTCCCAGGAGCATCTCCAATATAAACCAGCAACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTTGCCTCTTGTTTCCCAGGAGCATCTCCAATATAAACCAGCAACT  700

seq1  ACCCAGAGCAGTAACCTCTGTAGACAACATTGTATTGTACTCCTTCCCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGAGCAGTAACCTCTGTAGACAACATTGTATTGTACTCCTTCCCCC  750

seq1  ACCTACATGTTTTTCCCGAGAGCAATGCTAGAAACTGTATGAAGGGCTCG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACATGTTTTTCCCGAGAGCAATGCTAGAAACTGTATGAAGGGCTCG  800

seq1  GAATGAATTTCATCATTGACTTTCACTCTGAAGTTTTATACCTTGAAGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAATTTCATCATTGACTTTCACTCTGAAGTTTTATACCTTGAAGAT  850

seq1  GGAATCTACGGCTCAATCCCTTCAGGATTTTCCTCTCAGGAGCCTCTGAT  900
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GGAATCTACGGCTCAATCCCTTCAGGA-TTTCCTCTCAGGAGCCTCTGAT  899

seq1  CCAATTGAACACATCTTCCTTCTGCCGCTTTCCTCAACACCAGCAGGAAA  950
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CCAATTGAACACATCTTCCTTCTGCCGCTTTCCTCAACATCAGCAGGAAA  949

seq1  TTCACCTCAATAAGACTTCTTTTACTCTGCATTGTCATCCACGTGCTGAT  1000
      |||| ||||||||||||||||||||||||||||||||| |||||||||||
seq2  TTCA-CTCAATAAGACTTCTTTTACTCTGCATTGTCAT-CACGTGCTGAT  997

seq1  CTGGTTTTTACTTCCAGACACCTTCTCGAGCTGTATTATCTAAAGTAGTG  1050
      |||| |||||||| |||| | |||||||||||||||||| ||||||||||
seq2  CTGG-TTTTACTT-CAGA-AACTTCTCGAGCTGTATTAT-TAAAGTAGTG  1043

seq1  ACTTTCCAAGTATTTTCTCCTCAAAGTAATAATAATAACACCACCAAGTA  1100
      ||||| ||||||||||||||||  ||| ||||| |||| ||||||| |||
seq2  ACTTT-CAAGTATTTTCTCCTC--AGT-ATAAT-ATAA-ACCACCAGGTA  1087

seq1  CTCACTGCAATCCCATGAAGTAGGTTCTATTATTATTGTTCTTATTCTGT  1150
      |||||||| || ||||| |||||  ||||||| |||   ||||||   | 
seq2  CTCACTGCCAT-CCATG-AGTAG--TCTATTA-TAT--GTCTTAT--CGG  1128

seq1  AGAGGTGTCAACTACAACTCAGGATA  1176
      |||||| ||| ||   ||||||||||
seq2  AGAGGTTTCACCTTACACTCAGGATA  1154