BAC Information

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BAC

Clone NameB6Ng01-067N03
Chromosome17 (Build37)2 (Build37)
Map Location 21,293,298 - 21,294,364142,776,421 - 142,776,981
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneFpr-rs6, EG627743, EG224576, V2r6, EG637720, EG665525, EG627805, V1re5, EG627814, EG381065, EG224582, Fpr-rs3, EG433073, V1re2, V1re6, LOC100041976, V1re3, V1re1, V1re8, V1re7, V1re4, LOC627884, Ppp2r1a, V1rf5, Zfp160, LOC627912, LOC435509, EG627924, 4933430A09, EG665654, EG665662
Downstream geneLOC665666, EG665669, V1rf1, V1rf2, V1rf4, V1rf3, A830058L05Rik, Zfp54, Zfp51, Zfp53, LOC100042508, Zfp52, BC049807, Zfp760, BC043476, 4930515G13Rik, 2610036F08Rik, LOC624960, 3110048L19Rik, 4930432O21Rik, LOC665820, LOC665825, LOC674332, LOC631010, EG665844, EG210853
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067N03.bB6Ng01-067N03.g
ACCDH886586DH886587
length1,056824
definitionDH886586|Mus musculus domesticus DNA, BAC clone: B6Ng01-067N03, 5' end.DH886587|Mus musculus domesticus DNA, BAC clone: B6Ng01-067N03, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(21,293,298 - 21,294,364)(142,776,421 - 142,776,981)
sequence
gaattcttatctggccagcatcctttggttccagtggggacccaaagaag
tcatataccaaggcatggaggatgccaggaacatctaggatgtttcacag
ctacataagagcccatggcccagcctggaaaaacccctaaagtatcaagg
attatcagcgattctaaggtagggtggaatatagagctgatgaatactgg
gatggttgaaggaaacagcacgaggttaaattcagggaagtgtgttgtga
gagctaagacagggcaaatcaaaaggatggcctatcagacccaggataga
tagcctatgccagaattagaactgtctgggtagagctggcttctgtggct
gtaggagcactgaaagcacataagcaggaggactcccagcacactcttat
atctctctgcaggttggggaggcagaggacaaacacataggtgaccagta
tgtctgcctagtcatccagacagctcatgactagctcgcacagcaacatc
tgaggctgcacactggtggagctgctggttttcaagaagttaactcctct
ccatggaatgaagttcctaagcttcctctccctgtactggccaggtgaag
acccactgctgcaggacattgtggtgtagcgaagatctgtacagccatcc
cgtctatgccagccagccctgaaggtggcttgctagcatttcagcaccac
cagcctttgtccatgtctgggcaaggcagttcttggccctcaacccatct
tcccaccatatcattctgttttgtctgtccactggtaggagatggggaac
cagctctgacactagtctgggcatggagaaggtccaattcttcctgtccc
tggctctcagctcctgggattctcaggagcaaaattatctgagagaacaa
gagtcaatgttagccctgaagcctctggactcctgtctattttctagaga
tgtgtcatggtgggtcttgggcattagaggagcctatgactgcaaagcca
tcctatgtctacagacccgaagcaggtactgcagatctcaaatcaaaatc
tttagt
gaattctttgtttagaaatgagccccattttttaatggggttatttgatt
ttatggagtctaccttcttgagttctttatatatattggatattattccc
ctatctgatttatgataggtaacgatcctttcttagtggccttagttggt
ggcctttttgtcttattgacggtgtcttttgccttgcagaagctttgcaa
ttttatgaggtcccatttatgaattctccatcttacagcacaagccattg
ctgttgtattcaggaaattttcccctgtacccatatcttcgaggcttttc
ccaactttctcctctataagtttcagtgtttctggttttatgtggagttc
cttaatccacttagatttgaccttagtacaaggagataggaatggatcga
ttcgcattcttctacatgataacaaccagttgtgacagcaccatttgttg
aaaatgctgtcttttttcaactggatggtttttgctcccttgacaaagat
caagtgaccataggtgtgtgggttcatttctgggttttaattctattcca
ttggtctacttgtctgtcactataccagtgccatgcagtttttatcacaa
ttgctgggtagtacagctttaggtcaggcgtggtgattccaccagagagt
cttttattcttgagaagacttttttctatcctaggttttttgttattcca
gatgaatctgcagattgccctttctaagtcgttgaagaattgagttggga
ttttgatgggggattgcattgaatctgtagattgcttttggccagatagc
catttttatgattattgatcctgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_21293298_21294364
seq2: B6Ng01-067N03.b_46_1101

seq1  GAATTCTTATCTGGCCAGCATCCTTTGGTTCCAGTGGGGACCCAAAGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATCTGGCCAGCATCCTTTGGTTCCAGTGGGGACCCAAAGAAG  50

seq1  TCATATACCAAGGCATGGAGGATGCCAGGAACATCTAGGATGTTTCACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATACCAAGGCATGGAGGATGCCAGGAACATCTAGGATGTTTCACAG  100

seq1  CTACATAAGAGCCCATGGCCCAGCCTGGAAAAACCCCTAAAGTATCAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATAAGAGCCCATGGCCCAGCCTGGAAAAACCCCTAAAGTATCAAGG  150

seq1  ATTATCAGCGATTCTAAGGTAGGGTGGAATATAGAGCTGATGAATACTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCAGCGATTCTAAGGTAGGGTGGAATATAGAGCTGATGAATACTGG  200

seq1  GATGGTTGAAGGAAACAGCACGAGGTTAAATTCAGGGAAGTGTGTTGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTTGAAGGAAACAGCACGAGGTTAAATTCAGGGAAGTGTGTTGTGA  250

seq1  GAGCTAAGACAGGGCAAATCAAAAGGATGGCCTATCAGACCCAGGATAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTAAGACAGGGCAAATCAAAAGGATGGCCTATCAGACCCAGGATAGA  300

seq1  TAGCCTATGCCAGAATTAGAACTGTCTGGGTAGAGCTGGCTTCTGTGGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTATGCCAGAATTAGAACTGTCTGGGTAGAGCTGGCTTCTGTGGCT  350

seq1  GTAGGAGCACTGAAAGCACATAAGCAGGAGGACTCCCAGCACACTCTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGAGCACTGAAAGCACATAAGCAGGAGGACTCCCAGCACACTCTTAT  400

seq1  ATCTCTCTGCAGGTTGGGGAGGCAGAGGACAAACACATAGGTGACCAGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTCTGCAGGTTGGGGAGGCAGAGGACAAACACATAGGTGACCAGTA  450

seq1  TGTCTGCCTAGTCATCCAGACAGCTCATGACTAGCTCGCACAGCAACATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGCCTAGTCATCCAGACAGCTCATGACTAGCTCGCACAGCAACATC  500

seq1  TGAGGCTGCACACTGGTGGAGCTGCTGGTTTTCAAGAAGTTAACTCCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCTGCACACTGGTGGAGCTGCTGGTTTTCAAGAAGTTAACTCCTCT  550

seq1  CCATGGAATGAAGTTCCTAAGCTTCCTCTCCCTGTACTGGCCAGGTGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGAATGAAGTTCCTAAGCTTCCTCTCCCTGTACTGGCCAGGTGAAG  600

seq1  ACCCACTGCTGCAGGACATTGTGGTGTAGCGAAGATCTGTACAGCCATCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACTGCTGCAGGACATTGTGGTGTAGCGAAGATCTGTACAGCCATCC  650

seq1  CGTCTATGCCAGCCAGCCCTGAAGGTGGCTTGCTAGCATTTCAGCACCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTATGCCAGCCAGCCCTGAAGGTGGCTTGCTAGCATTTCAGCACCAC  700

seq1  CAGCCTTTGTCCATGTCTGGGCAAGGCAGTTCTTGGCCCTCAACCCATCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTTTGTCCATGTCTGGGCAAGGCAGTTCTTGGCCCTCAACCCATCT  750

seq1  TCCCACCATATCATTCTGTTTTGTCTGTCCACTGGTAGGAGATGGGGAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACCATATCATTCTGTTTTGTCTGTCCACTGGTAGGAGATGGGGAAC  800

seq1  CAGCTCTGACACTAGTCTGGGCATGGAGAAGGTCCAATTCTTCCTGTCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCTGACACTAGTCTGGGCATGGAGAAGGTCCAATTCTTCCTGTCCC  850

seq1  TGGCTCTCAGCTCCTGGGATTCTCAGGAGCAAAATTATCTGAGAGAAACA  900
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TGGCTCTCAGCTCCTGGGATTCTCAGGAGCAAAATTATCTGAGAG-AACA  899

seq1  AGAGTCAATGTTAGCCCTGAAGCCTCTTGGACTCCTGTCTTATTTTCTAG  950
      |||||||||||||||||||||||||| |||||||||||| ||||||||||
seq2  AGAGTCAATGTTAGCCCTGAAGCCTC-TGGACTCCTGTC-TATTTTCTAG  947

seq1  AGAATGTGTCATGGTGGGTCTTGGGCATTAGAGGGAGCCCTATGACTGCA  1000
      || ||||||||||||||||||||||||||||| |||| ||||||||||||
seq2  AG-ATGTGTCATGGTGGGTCTTGGGCATTAGA-GGAG-CCTATGACTGCA  994

seq1  AAGCCATCCTATGTTCCACAGACCCAGAGCACGCTACTGCAGGATCTCCA  1050
      ||||||||||||| || ||||||||  |||| | ||||||| ||||| ||
seq2  AAGCCATCCTATG-TCTACAGACCCGAAGCA-GGTACTGCA-GATCT-CA  1040

seq1  AATCACAAATCTCTAGT  1067
      ||||| |||||| ||||
seq2  AATCA-AAATCTTTAGT  1056

seq1: chr2_142776421_142776981
seq2: B6Ng01-067N03.g_330_890 (reverse)

seq1  GCAGGATCAA-CATTGTAAAAATGGCTATCTTGCCAAAAGCAATCTACAG  49
      ||||||||||  ||  ||||||||||||||| ||||||||||||||||||
seq2  GCAGGATCAATAATCATAAAAATGGCTATCTGGCCAAAAGCAATCTACAG  50

seq1  ATTCAATGCAAT-CCCCATCAAAATTCCAACTCAATTCTTCAACGAATTA  98
      |||||||||||| |||||||||||| |||||||||||||||||||| |||
seq2  ATTCAATGCAATCCCCCATCAAAATCCCAACTCAATTCTTCAACGACTTA  100

seq1  GAAGGAGCAATTTGCAAATTCATCTGGAATAACAAAAAACCTAGGATAGC  148
      ||| | ||||| |||| |||||||||||||||||||||||||||||||| 
seq2  GAAAGGGCAATCTGCAGATTCATCTGGAATAACAAAAAACCTAGGATAGA  150

seq1  AAAAAGTCTTCTCAAGGATAAAAGAACCTCTGGTGGAATCACCATGCCTG  198
      |||||||||||||||| ||||||||  ||||||||||||||||| |||||
seq2  AAAAAGTCTTCTCAAGAATAAAAGACTCTCTGGTGGAATCACCACGCCTG  200

seq1  ACCTAAAGCTTTACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGG  248
      |||||||||| ||||||  ||||||||||||||||||||||||| |||||
seq2  ACCTAAAGCTGTACTACCCAGCAATTGTGATAAAAACTGCATGGCACTGG  250

seq1  TATAGAGACAGACAAGTAGACCAATGGAATAGAATTGAAGACCCAGAAAT  298
      ||||| |||||||||||||||||||||||||||||| || ||||||||||
seq2  TATAGTGACAGACAAGTAGACCAATGGAATAGAATT-AAAACCCAGAAAT  299

seq1  GAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCA  348
      |||||||||||||||||||||||||||||| | ||||||||| |||||||
seq2  GAACCCACACACCTATGGTCACTTGATCTTTGTCAAGGGAGCAAAAACCA  349

seq1  TCCAGAGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGG  398
      |||||  ||| |||||||||||||||||||| |||||||| |||||||||
seq2  TCCAGTTGAAAAAAGACAGCATTTTCAACAAATGGTGCTGTCACAACTGG  399

seq1  TTGTTATCATGTAGAAGAATGGGAATCGATCCATACTTATCTCCTTGTAC  448
      ||||||||||||||||||||| |||||||||||| | |||||||||||||
seq2  TTGTTATCATGTAGAAGAATGCGAATCGATCCATTCCTATCTCCTTGTAC  449

seq1  TAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACAC  498
      ||||||||||||||||||||| |||||||| |||||||||||||| ||||
seq2  TAAGGTCAAATCTAAGTGGATTAAGGAACTCCACATAAAACCAGAAACAC  499

seq1  TGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACA  548
      |||||||||||||||||||||| ||||||||||| ||||||||||| |||
seq2  TGAAACTTATAGAGGAGAAAGTTGGGAAAAGCCTCGAAGATATGGGTACA  549

seq1  GGGGACAAATTCC  561
      ||||| || ||| 
seq2  GGGGAAAATTTC-  561