BAC Information

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BAC

Clone NameB6Ng01-067O03
Chromosome2 (Build37)
Map Location 149,220,186 - 149,221,248
singlet/doubletsinglet
Overlap genenone
Upstream geneSstr4, Thbd, Cd93, Nxt1, Gzf1, Napb, Cstl1, Cst11, 8030411F24Rik, Cst12, Cst8, Cst13, Cst9, 9230104L09Rik, Cst3, OTTMUSG00000015744, Gm1330, EG668921, LOC433483, LOC383754, LOC100043593, LOC241715
Downstream geneCst10, EG667048, C530025M09Rik, OTTMUSG00000015750, LOC279056, Zfp120, EG245174, 3300002I08Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067O03.bB6Ng01-067O03.g
ACCDH886632DH886633
length1,1211,147
definitionDH886632|Mus musculus domesticus DNA, BAC clone: B6Ng01-067O03, 5' end.DH886633|Mus musculus domesticus DNA, BAC clone: B6Ng01-067O03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattacttactaaatgaagatacctaagatttccattaagtgaag
aatggacaaagaaaattgtgtacatacacacaatgaaattttattcatct
gcaaagaaaaatgaaatttgctggtaaattaatgtaacttgagaaaaatc
atattgaatagggttacttaggcacccaaatacaaatatcacatgatctt
tctcatacaattcttagtgtcaaatattcagatatgtgtgattaaagagg
agagcttggggaagccagaaaactagaaagaggtcactaaagggatgaag
aaagatataaaaaatgagaggtaataggagaaaatgtgtgttataatggg
aacaataaaataattgaggagtttaagtgataacaggtagggaggaacag
aaaaaggaatgcaaaagacctcacccatactaaggatccttaaaatggct
atgttagcacctaatattttataagcttccatacatacatgagcttaaaa
gaatttaacttgtacaggaggatattttttcatgctgtcgtgggttatca
aacaagcccagttgtatgtactaatgccagctgaatgatatccttttttg
ttgatcaagttgtgaaccttagaggtcacagcagcgtgtaatataagaac
ggtttgctgtcttcttgattaggtcactgtacttttggtgctcattgttg
ttatacttattaggcatacacgtacaaacacacaaacacacacacacaca
cacacacaaacacacacagcacagagcaaattgtagaagaggaacagaat
aattatgtcaggggaggactgctgtgaaatggcatcttcccaatatgatt
ggtaatgttacactcatgaggtcatagagcttatgcttgcttatttaaaa
aggcatgcacaaaatcaagctggtcaggatttcaacacaggtgagaatag
accatgaagccttgctcttaggtgagacttttgcaattgaagttactgtt
agatgagaaacagtttttcttcgagatataggcctcagatagttgtctat
gtttcagcagatggtctacctccatgcaattaggagcagcaaagattgaa
tgagtgaattacgaaattggc
gaattctcacccgaggaatactgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaagattcaggtgacagc
agatgctggtgaggatgtggagaaagaagaacacttctccattgttggtg
ggattgcaagcttgtacaaccattctggaaatcagtctggcagttcctca
gaaaattggacatagtactaccagaggatcccgcaaacctctcctgggca
tatatccagaagatgtcccaaccggtaagaaggacacatgctccactatg
ttcatagcaggcttatttataatggccagaagctggaaagaacccagatg
cccctcaacagaggaatggatacagaaaatgtggtacatttacacaatgg
aatactactgagctattatcctaggcaaatggatggacctggagggcatc
atcctgagtgaggtaacccaatcacaaaggaactcacacaatatgtactc
actgataagtggatattagcccagaaacttaggatacccaagatataaga
tccaagttgctaagtgcacgaaactcaagaagaatgaagaccaaagtgtg
gacactttgccctttcttagaattgggaacaaaacacccatggaaggagt
tacagagacaaagtttggagctgtgacgaaaggatggaccatctagagac
tgccatatctggggatccttcccataatcagcttccaaacgctgacacca
ttgcacacactagcaagatattgctgaaaggacccagatatagctctctc
ttgtgagactatgctggggcctagcaacacagaagtggatgctcacagtc
agctattggatggatcacaggcccccaatggaggatctgagaaagtaccc
aagagctaacgggatctgcaaccctatagtggaacacattatgactaacc
agtactccggaactcttgacttctagctgctatgtatcaagatggcctag
tcggccatcactggaaagagaggcccattgaacttgcaaactttatatgc
tccagtacagggaaagccggtccaaaaagtggagagtggggggaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_149220186_149221248
seq2: B6Ng01-067O03.b_112_1168

seq1  ATTGTGTACATACACACAATGAAATTTTATTCATCTGCAAAGAAAAATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGTACATACACACAATGAAATTTTATTCATCTGCAAAGAAAAATGA  50

seq1  AATTTGCTGGTAAATTAATGTAACTTGAGAAAAATCATATTGAATAGGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGCTGGTAAATTAATGTAACTTGAGAAAAATCATATTGAATAGGGT  100

seq1  TACTTAGGCACCCAAATACAAATATCACATGATCTTTCTCATACAATTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTAGGCACCCAAATACAAATATCACATGATCTTTCTCATACAATTCT  150

seq1  TAGTGTCAAATATTCAGATATGTGTGATTAAAGAGGAGAGCTTGGGGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTCAAATATTCAGATATGTGTGATTAAAGAGGAGAGCTTGGGGAAG  200

seq1  CCAGAAAACTAGAAAGAGGTCACTAAAGGGATGAAGAAAGATATAAAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAAACTAGAAAGAGGTCACTAAAGGGATGAAGAAAGATATAAAAAA  250

seq1  TGAGAGGTAATAGGAGAAAATGTGTGTTATAATGGGAACAATAAAATAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGGTAATAGGAGAAAATGTGTGTTATAATGGGAACAATAAAATAAT  300

seq1  TGAGGAGTTTAAGTGATAACAGGTAGGGAGGAACAGAAAAAGGAATGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAGTTTAAGTGATAACAGGTAGGGAGGAACAGAAAAAGGAATGCAA  350

seq1  AAGACCTCACCCATACTAAGGATCCTTAAAATGGCTATGTTAGCACCTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCTCACCCATACTAAGGATCCTTAAAATGGCTATGTTAGCACCTAA  400

seq1  TATTTTATAAGCTTCCATACATACATGAGCTTAAAAGAATTTAACTTGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTATAAGCTTCCATACATACATGAGCTTAAAAGAATTTAACTTGTA  450

seq1  CAGGAGGATATTTTTTCATGCTGTCGTGGGTTATCAAACAAGCCCAGTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGGATATTTTTTCATGCTGTCGTGGGTTATCAAACAAGCCCAGTTG  500

seq1  TATGTACTAATGCCAGCTGAATGATATCCTTTTTTGTTGATCAAGTTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTACTAATGCCAGCTGAATGATATCCTTTTTTGTTGATCAAGTTGTG  550

seq1  AACCTTAGAGGTCACAGCAGCGTGTAATATAAGAACGGTTTGCTGTCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTAGAGGTCACAGCAGCGTGTAATATAAGAACGGTTTGCTGTCTTC  600

seq1  TTGATTAGGTCACTGTACTTTTGGTGCTCATTGTTGTTATACTTATTAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTAGGTCACTGTACTTTTGGTGCTCATTGTTGTTATACTTATTAGG  650

seq1  CATACACGTACAAACACACAAACACACACACACACACACACACAAACACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACACGTACAAACACACAAACACACACACACACACACACACAAACACA  700

seq1  CACAGCACAGAGCAAATTGTAGAAGAGGAACAGAATAATTATGTCAGGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCACAGAGCAAATTGTAGAAGAGGAACAGAATAATTATGTCAGGGG  750

seq1  AGGACTGCTGTGAAATGGCATCTTCCCAATATGA-TGGTAATGTTACACT  799
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AGGACTGCTGTGAAATGGCATCTTCCCAATATGATTGGTAATGTTACACT  800

seq1  CATGAGGTCATAGAGCTTATGCTTGCTTATTT-AAAAGGCATGCACAAAA  848
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CATGAGGTCATAGAGCTTATGCTTGCTTATTTAAAAAGGCATGCACAAAA  850

seq1  TCAAGCTGGTCAGGATTCCAACACAGGTGAGAATAGACCATGAAGCCTTG  898
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TCAAGCTGGTCAGGATTTCAACACAGGTGAGAATAGACCATGAAGCCTTG  900

seq1  CTCTTAGGTGAGGACATTTGGCAATTGAAAGTTACTGTTAGATGAAGAAA  948
      ||||||||||| ||| ||| ||||||| |||||||||||||||| |||||
seq2  CTCTTAGGTGA-GAC-TTTTGCAATTG-AAGTTACTGTTAGATG-AGAAA  946

seq1  CAG-TTTTCTTCAGAGATATA-GCCTCAGATAGGTTGTCCATGTTTCAGC  996
      ||| |||||||| |||||||| |||||||||| |||||| ||||||||||
seq2  CAGTTTTTCTTC-GAGATATAGGCCTCAGATA-GTTGTCTATGTTTCAGC  994

seq1  AGATGGTCTTACACCCATGCACATAGGAGCAGCAAGAATTGAAATGAGTG  1046
      |||||||| |||  |||||||  ||||||||||||  |||| ||||||||
seq2  AGATGGTC-TACCTCCATGCAATTAGGAGCAGCAAAGATTG-AATGAGTG  1042

seq1  AATTACAGAAATATGGC  1063
      |||||| ||||| ||||
seq2  AATTAC-GAAAT-TGGC  1057