BAC Information

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BAC

Clone NameB6Ng01-067P03
Chromosome2 (Build37)
Map Location 142,776,671 - 142,777,698
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067P03.bB6Ng01-067P03.g
ACCDH886678DH886679
length1,0161,178
definitionDH886678|Mus musculus domesticus DNA, BAC clone: B6Ng01-067P03, 5' end.DH886679|Mus musculus domesticus DNA, BAC clone: B6Ng01-067P03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaattttgcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcaattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctgtataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctctccatctt
ctgagatcttctttaatttctttcttcagagacttgaagtttttatcata
cagatctttcacttccttagttagagtcactccgagatattttatattat
ttgtgactattgagaaggtgttgttccctaatttcttctcagcctgttat
ctttgtgtagagaaag
gaattccacacaaagccagagacactgaaatttatagaggaaaaagtggg
gaaaagcctccaagagatgggcacatgggaaaaatttctgaacagaagag
caatggcttgtgctgttataatcgacaaatgggacctcataaagttggaa
agcttctgtaaagcattaagacaaaaaggccaggaacagattgagaaagg
atttttaccaatcctaaatctgataggggattaatatccaatatatacaa
agagctcaagaagttggactccagaaattcaaataacaccattaaaatgg
ggtacagagctacaaaaagaattctcaactgaggaatatgaaagggctga
gaagcacctgaggaataacgaatggcagagaagcacctgaaaaaatgttc
aacatccttaattatcagggaaatgcaaatcaaaaggaccctgagattcc
acctcacaccagtcagaatgactaagttaaaaaattcagatgacagcaga
cagtaatttgcaaaacacaagaaaatcaagaaaaatatagaccaacgtgt
ggatacttcattcctccttagaatagcgaacaaaatgccgatggaaggag
ttacagagacaaaggtaggagctgagaggaaaggatggaccatccagaga
ctgccccacccagggatccatcccataatcagccaccaaattcagactct
attgcatatgccagaaatattttgctgaaaggactttgatattgctgtct
cttgtgaggctatgccagtgcctggcaaatacagaagtggatgctcattg
ccatttattagatggtacacagggccccccaattaagctagagaaagtac
gcaaggagctgaatgggtctgcaaccctataggtggaacaacaatatgaa
ctaaccagtatccccagagctcgtttctctagctgcatacatagcagaag
atggcctagttagccatctttgggaagagaggctcctggttttgcaaact
tgatatgtaccagtacaggggaatgccagagccagagtaggatgggtgga
cgaagcagacagggagttaaggggaattcgatacattgacttaatgacga
aagctcgtgagaattgaaaatcagatacttgaatgttagatcactgaatt
gcaccttgcggtttacttgaggaagtag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776671_142777698
seq2: B6Ng01-067P03.b_48_615 (reverse)

seq1  TAGAGACAGACAAGTAGACCAATGGAATAGAATTGAAGACCCAGAAATGA  50
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGACAGACAAGTAGACCAATGGAATAGAATTGAAGACCCAGAAATGA  50

seq1  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATC  100

seq1  CAGAGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  150
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  150

seq1  GTTATCATGTAGAAGAATGGGAATCGATCCATACTTATCTCCTTGTACTA  200
      ||||||||||||||||||| |||| |||||||||||||||||||||||||
seq2  GTTATCATGTAGAAGAATGCGAATTGATCCATACTTATCTCCTTGTACTA  200

seq1  AGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTG  250
      ||||||||||||| |||||||| |||||||||||||||||||||||||||
seq2  AGGTCAAATCTAAATGGATCAAAGAACTTCACATAAAACCAGAGACACTG  250

seq1  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGG  300

seq1  GGACAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAA  350
      ||  ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAA  350

seq1  TTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  400

seq1  ACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTAC  450
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ACCGTCAATAAGACAAAGAGACCACCAACAGATTGGGAAAGGATCTTTAC  450

seq1  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  500

seq1  AGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCA  550

seq1  CAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  600
       ||            ||| |||||    |||                   
seq2  GAA----------CTGAACAAAGA----ATTC------------------  568

seq1  ACAACTGGTTGTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCT  650
                                                        
seq2  --------------------------------------------------  568

seq1  CCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  700
                                                        
seq2  --------------------------------------------------  568

seq1  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  750
                                                        
seq2  --------------------------------------------------  568

seq1  TGGGCACAGGGGAAAAATTCCTGAACAGAAGAGCAATGGCTTGTGCTGTA  800
                                                        
seq2  --------------------------------------------------  568

seq1  AGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  850
                                                        
seq2  --------------------------------------------------  568

seq1  GGCAAAAGACACTGTCTATAAGACAAAAAGACCACCAACAGACTGGGAAA  900
                                                        
seq2  --------------------------------------------------  568

seq1  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  950
                                                        
seq2  --------------------------------------------------  568

seq1  AAAGAACTCAAGAAGGTGGACCTCAGAAAATCAAATAACCCCATTAAAAA  1000
                                                        
seq2  --------------------------------------------------  568

seq1  ATGGGGCTCAGAACTGAACAAAGAATTC  1028
                                  
seq2  ----------------------------  568