BAC Information

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BAC

Clone NameB6Ng01-067P08
Chromosome2 (Build37)
Map Location 71,729,374 - 71,917,676
singlet/doubletdoublet
Overlap genePdk1, Rapgef4
Upstream geneMettl8, 4833418A01Rik, Cybrd1, Dync1i2, Slc25a12, LOC667528, Hat1, LOC100040177, Metapl1, LOC100040207, Dlx1, Dlx1as, Dlx2, Gm1631, Itga6
Downstream geneLOC100040270, B230120H23Rik, Cdca7, LOC383712, LOC635960, LOC100039928, 6430710C18Rik, Sp3, Hspe1-ps5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067P08.bB6Ng01-067P08.g
ACCDH886688DH886689
length572990
definitionDH886688|Mus musculus domesticus DNA, BAC clone: B6Ng01-067P08, 5' end.DH886689|Mus musculus domesticus DNA, BAC clone: B6Ng01-067P08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(71,917,099 - 71,917,676)(71,729,374 - 71,730,367)
sequence
acagatgaagaaatttaaaacaacaacaaaagcacaaaaaaaaaaaactt
ttaaatgaatggagagataacatggggtacagccagtgaatggaacactg
ctcggtgatatcaaaggataataaaaataaaaaaagaagaagaaaataaa
gagccagtgctcagacaagccgtaacttgaatggatgcaaaaggcagcaa
atgcagaaaacataacttgtacgtgtttatcttcatgcaatgttcagaag
aaaggaaagatctgagtcagcggtcacctggggccagaggaggaacagaa
gtcactgttcagagaccaccaggacccaacgggaaggaagcgcacagctg
ctgtgaggctgacactcagcgaggggctgtacttgaaatgggggaagtgg
tgaggggactttgaggttttctaattgtgccattcaaaggttggctttaa
aagtcttcgaaggggttgaggctgtagtgggggatagaatcaacgttagc
atgtgtgaggccctgggtttgatcttcagcatgggacagagaagagggag
gaggcagagagagagagagaga
gaattcactgtgaagttactgtggacctttctttttctctgggacctctg
gactcatttgtcttattttcttctcttcttgcttctcctgttccccctgg
gaaaagcagcttgaaggagaagggatttgttttggctcatagtgaaaggg
aacagcgcatcgtgctggggaaggaatccaggcagcttgctgccttgtgt
ccagagtcaggaaatagccgtgatcctggggttcaggtagccttctcttt
ggcaggcgagtccaagaccaagggttgttaccagccatttttagcatgga
ctctgcacctcaattatcctaatcaagataatccctcatcagctttgcca
gaagtaatctaatctagataattgccacaggataactagaagtagcctaa
tctagataatccctccccccacacccccatggcaagactacatgtacgta
tattgatagctcccccagacaggcccagagactaccttctaggtgactct
agatcctattaggttgataagattaacccatcatcccagtttccttggga
atgagtttctgctgctagcagtatgggttggaggggtcaaagtcaggtca
gcaagcttggcagccaccacctttatccactgagccatctcatttgcccc
ttctttgactgtagactctcagctctgaatttttatttccagtgttttaa
agattttttttaaaaaagatttatttttatgtatatgagtacactgtagc
tgtattcagacacgccagaagagggcatcggatcccattacagatggttg
ttagccaccatgtggttgctgggaattgaactcaggacctctggaagagc
agtcagtgctcttaacctcttagccatctttccagccctgttttttaggt
ttttaagaaattttaaaaattattccttataaagtctgttctggtttctc
ttttgtcacttgaagaaggaatataattattatttattta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_71917099_71917676
seq2: B6Ng01-067P08.b_44_621 (reverse)

seq1  TCTCTCTCTCTCTCTCTGCCTCCTCCCTCTTCTCTGTCCCATGCTGAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTGCCTCCTCCCTCTTCTCTGTCCCATGCTGAAGA  50

seq1  TCAAACCCAGGGCCTCACACATGCTAACGTTGATTCTATCCCCCACTACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACCCAGGGCCTCACACATGCTAACGTTGATTCTATCCCCCACTACA  100

seq1  GCCTCAACCCCTTCGAAGACTTTTAAAGCCAACCTTTGAATGGCACAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAACCCCTTCGAAGACTTTTAAAGCCAACCTTTGAATGGCACAATT  150

seq1  AGAAAACCTCAAAGTCCCCTCACCACTTCCCCCATTTCAAGTACAGCCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACCTCAAAGTCCCCTCACCACTTCCCCCATTTCAAGTACAGCCCC  200

seq1  TCGCTGAGTGTCAGCCTCACAGCAGCTGTGCGCTTCCTTCCCGTTGGGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCTGAGTGTCAGCCTCACAGCAGCTGTGCGCTTCCTTCCCGTTGGGTC  250

seq1  CTGGTGGTCTCTGAACAGTGACTTCTGTTCCTCCTCTGGCCCCAGGTGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGGTCTCTGAACAGTGACTTCTGTTCCTCCTCTGGCCCCAGGTGAC  300

seq1  CGCTGACTCAGATCTTTCCTTTCTTCTGAACATTGCATGAAGATAAACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTGACTCAGATCTTTCCTTTCTTCTGAACATTGCATGAAGATAAACAC  350

seq1  GTACAAGTTATGTTTTCTGCATTTGCTGCCTTTTGCATCCATTCAAGTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAAGTTATGTTTTCTGCATTTGCTGCCTTTTGCATCCATTCAAGTTA  400

seq1  CGGCTTGTCTGAGCACTGGCTCTTTATTTTCTTCTTCTTTTTTTATTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTTGTCTGAGCACTGGCTCTTTATTTTCTTCTTCTTTTTTTATTTTT  450

seq1  ATTATCCTTTGATATCACCGAGCAGTGTTCCATTCACTGGCTGTACCCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCCTTTGATATCACCGAGCAGTGTTCCATTCACTGGCTGTACCCCA  500

seq1  TGTTATCTCTCCATTCATTTAAAAGTTTTTTTTTTTTGTGCTTTTGTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATCTCTCCATTCATTTAAAAGTTTTTTTTTTTTGTGCTTTTGTTGT  550

seq1  TGTTTTAAATTTCTTCATCTGTGAATTC  578
      ||||||||||||||||||||||||||||
seq2  TGTTTTAAATTTCTTCATCTGTGAATTC  578

seq1: chr2_71729374_71730367
seq2: B6Ng01-067P08.g_68_1057

seq1  GAATTCACTGTGAAGTTACTGTGGACCTTTCTTTTTCTCTGGGACCTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGTGAAGTTACTGTGGACCTTTCTTTTTCTCTGGGACCTCTG  50

seq1  GACTCATTTGTCTTATTTTCTTCTCTTCTTGCTTCTCCTGTTCCCCCTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCATTTGTCTTATTTTCTTCTCTTCTTGCTTCTCCTGTTCCCCCTGG  100

seq1  GAAAAGCAGCTTGAAGGAGAAGGGATTTGTTTTGGCTCATAGTGAAAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGCAGCTTGAAGGAGAAGGGATTTGTTTTGGCTCATAGTGAAAGGG  150

seq1  AACAGCGCATCGTGCTGGGGAAGGAATCCAGGCAGCTTGCTGCCTTGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCGCATCGTGCTGGGGAAGGAATCCAGGCAGCTTGCTGCCTTGTGT  200

seq1  CCAGAGTCAGGAAATAGCCGTGATCCTGGGGTTCAGGTAGCCTTCTCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGTCAGGAAATAGCCGTGATCCTGGGGTTCAGGTAGCCTTCTCTTT  250

seq1  GGCAGGCGAGTCCAAGACCAAGGGTTGTTACCAGCCATTTTTAGCATGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGCGAGTCCAAGACCAAGGGTTGTTACCAGCCATTTTTAGCATGGA  300

seq1  CTCTGCACCTCAATTATCCTAATCAAGATAATCCCTCATCAGCTTTGCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCACCTCAATTATCCTAATCAAGATAATCCCTCATCAGCTTTGCCA  350

seq1  GAAGTAATCTAATCTAGATAATTGCCACAGGATAACTAGAAGTAGCCTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAATCTAATCTAGATAATTGCCACAGGATAACTAGAAGTAGCCTAA  400

seq1  TCTAGATAATCCCTCCCCCCACACCCCCATGGCAAGACTACATGTACGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGATAATCCCTCCCCCCACACCCCCATGGCAAGACTACATGTACGTA  450

seq1  TATTGATAGCTCCCCCAGACAGGCCCAGAGACTACCTTCTAGGTGACTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGATAGCTCCCCCAGACAGGCCCAGAGACTACCTTCTAGGTGACTCT  500

seq1  AGATCCTATTAGGTTGATAAGATTAACCCATCATCCCAGTTTCCTTGGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCTATTAGGTTGATAAGATTAACCCATCATCCCAGTTTCCTTGGGA  550

seq1  ATGAGTTTCTGCTGCTAGCAGTATGGGTTGGAGGGGTCAAAGTCAGGTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTTTCTGCTGCTAGCAGTATGGGTTGGAGGGGTCAAAGTCAGGTCA  600

seq1  GCAAGCTTGGCAGCCACCACCTTTATCCACTGAGCCATCTCATTTGCCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCTTGGCAGCCACCACCTTTATCCACTGAGCCATCTCATTTGCCCC  650

seq1  TTCTTTGACTGTAGACTCTCAGCTCTGAATTTTTATTTCCAGTGTTTTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGACTGTAGACTCTCAGCTCTGAATTTTTATTTCCAGTGTTTTAA  700

seq1  AGATTTTTTTTAAAAAAGATTTATTTTTATGTATATGAGTACACTGTAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTTTTTAAAAAAGATTTATTTTTATGTATATGAGTACACTGTAGC  750

seq1  TGTATTCAGACACGCCAGAAGAGGGCATCGGATCCCATTACAGATGGTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTCAGACACGCCAGAAGAGGGCATCGGATCCCATTACAGATGGTTG  800

seq1  TTAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGC  850

seq1  AGTCAGTGCTCTTAACCTCTTAGCCATCTTTCCAGCCCTGTTTTTTAGGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGTGCTCTTAACCTCTTAGCCATCTTTCCAGCCCTGTTTTTTAGGT  900

seq1  TTTTAAAGAAATTTTAAAAAATTATTCCTTATAAAAGTCTGTTCTGGTTT  950
      |||| |||||||||| |||||||||||||||| |||||||||||||| ||
seq2  TTTT-AAGAAATTTT-AAAAATTATTCCTTAT-AAAGTCTGTTCTGG-TT  946

seq1  TCTCTTTTGTCACTT--TGAAGGTAGTAATTATAATTATTTATTTA  994
      |||||||||||||||   ||||| |   || || ||||||||||||
seq2  TCTCTTTTGTCACTTGAAGAAGGAA--TATAATTATTATTTATTTA  990