BAC Information

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BAC

Clone NameB6Ng01-067P22
Chromosome2 (Build37)14 (Build37)
Map Location 142,776,588 - 142,777,22057,047,478 - 57,048,581
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067P22.bB6Ng01-067P22.g
ACCDH886714DH886715
length9711,105
definitionDH886714|Mus musculus domesticus DNA, BAC clone: B6Ng01-067P22, 5' end.DH886715|Mus musculus domesticus DNA, BAC clone: B6Ng01-067P22, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(142,776,588 - 142,777,220)(57,047,478 - 57,048,581)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttctatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggctttcccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagagaggaatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagaaaagctttaggtcaggcatggtgattccaccagaggttcttt
tgatttatttatttatctttaatcttttttttttttatgtccagttgtta
tccccctcctggtctgccctcatctcattcctccaccaagaggatgccca
cccccccacctacctccaaccccagtaggcctccccactccctggggcct
cagtctctcaagggttaggtgcatcttctctcactgatgccagaccaggc
agtcctctgctgtatatgtgccagggaccttgtaccagctagtgcctggt
tggtagctcagtgtctaagagatcttgggggtctaggttagttgagactg
ctggtcttcctatgggtcacc
gaattcacatatttggagaaatacaaaccactttttcttctacatgggcc
gaccattttcttatatgtgattaaaaggatcatatgaatcataatcatat
atgtgattaaagaatcacaaatgtgattcttttttttttttttttttttt
ttggtttttcgagacagggtttctctgtgtagttctggctgtcctgtaga
tcaagctggcctacaaacgtgattcttgaaatcacatttaaagaaatgga
ctcatgaaacgtttgatatgaccaaagcaatatgcttagtaatgtctttg
tccatttgtctctacaccaatgcttaatttccttacattattatggcatt
ttatgtcttgtgcataaaacatttgattttctcctcttcggtgctacaca
ctaaaaggcctggcacatgattggcaagtgttctgccattgaagtatgta
cctaggtacaaacgtttttatgaaatttgtttgcttgcttgctttcttgc
ttgcttgataggtccttattgtacaatccagactggccttaaactcacca
tgcatcccagactgacctcaaactcagagtcttgccttagatgctgggat
tacaagcatatcccaccatgcccagatttctaactcaggctctaatgcta
agcagtcattctatccctgagaacatttgctgccatgattccttttcatg
ttctttttgtcttgatattagaattttattcaggccgccctcctaatttc
ttcttttttctttattctgtattcctttgtttctttgaacatatttaaga
caattgtttcaaatcagtctacaaagtccagtggcctatgcttctttaga
aaatctctaccactggtttcttccttttgactggagccatattatggtat
aagtgttttcatccatgtccctggtaggatttatgtggaacttggggcta
agaaactagcagcctcctctcagtctttatactctgattcttcctgggaa
cattcttcgtagataggctgaccacattttgagtcttgggattggtataa
gatgaaagctaaggtctgcttatgtgtgggccaggaagtagcttagcctc
acctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776588_142777220
seq2: B6Ng01-067P22.b_64_696 (reverse)

seq1  AAAAGAACCTCTGGTGGAATCACCATGCCTGACCTAAAGCTTTACTACAG  50
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AAAAGAACCTCTGGTGGAATCACCATGCCTGACCTAAAGCTTTTCTACAG  50

seq1  AGCAATTGTGATAAAAACTGCATGGTACTGGTATAGAGACAGACAAGTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATTGTGATAAAAACTGCATGGTACTGGTATAGAGACAGACAAGTAG  100

seq1  ACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATGGT  150

seq1  CACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGAGGAAGAAAGACAG  200
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGTGGAAGAAAGACAG  200

seq1  CATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAA  250

seq1  TGGGAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATCTAAGTGG  300
      || |||||||||||| | | ||||||||||||||||||||||||||||||
seq2  TGCGAATCGATCCATTCCTCTCTCCTTGTACTAAGGTCAAATCTAAGTGG  300

seq1  ATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAA  350

seq1  AGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGACAAATTCCTGAACA  400
      ||||||| |||||||||||||||||||||||||||| |||||||||||||
seq2  AGTGGGGGAAAGCCTTGAAGATATGGGCACAGGGGAAAAATTCCTGAACA  400

seq1  GAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATGGGACCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATGGGACCTA  450

seq1  ATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAA  500

seq1  AAGACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATA  550

seq1  GGGGACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGACTTCAGA  600
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GGGGACTAATATCCAACATATAGAAAGAACTCAAGAAGGTGGACTTCAGA  600

seq1  AAATCAAATAACCCCATTAAAAAATGGGGCTCA  633
      |||||||||||||||||||||||||||||||||
seq2  AAATCAAATAACCCCATTAAAAAATGGGGCTCA  633

seq1: chr14_57047478_57048581
seq2: B6Ng01-067P22.g_69_1173

seq1  GAATTCACATATTTGGAGAAATACAAACCACTTTTTCTTCTACATGGGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATATTTGGAGAAATACAAACCACTTTTTCTTCTACATGGGCC  50

seq1  GACCATTTTCTTATATGTGATTAAAAGGATCATATGAATCATAATCATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCATTTTCTTATATGTGATTAAAAGGATCATATGAATCATAATCATAT  100

seq1  ATGTGATTAAAGAATCACAAATGTGATTCTTTTTTTTTTTTTTTTTTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGATTAAAGAATCACAAATGTGATTCTTTTTTTTTTTTTTTTTTTTT  150

seq1  TTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGTTCTGGCTGTCCTGTAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGTTCTGGCTGTCCTGTAGA  200

seq1  TCAAGCTGGCCTACAAACGTGATTCTTGAAATCACATTTAAAGAAATGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGCTGGCCTACAAACGTGATTCTTGAAATCACATTTAAAGAAATGGA  250

seq1  CTCATGAAACGTTTGATATGACCAAAGCAATATGCTTAGTAATGTCTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGAAACGTTTGATATGACCAAAGCAATATGCTTAGTAATGTCTTTG  300

seq1  TCCATTTGTCTCTACACCAATGCTTAATTTCCTTACATTATTATGGCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTTGTCTCTACACCAATGCTTAATTTCCTTACATTATTATGGCATT  350

seq1  TTATGTCTTGTGCATAAAACATTTGATTTTCTCCTCTTCGGTGCTACACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTCTTGTGCATAAAACATTTGATTTTCTCCTCTTCGGTGCTACACA  400

seq1  CTAGAAGGCCTGGCACATGATTGGCAAGTGTTCTGCCATTGAAGTATGTA  450
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAGGCCTGGCACATGATTGGCAAGTGTTCTGCCATTGAAGTATGTA  450

seq1  CCTAGGTACAAACGTTTTTATGAAATTTGTTTGCTTGCTTGCTTTCTTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGGTACAAACGTTTTTATGAAATTTGTTTGCTTGCTTGCTTTCTTGC  500

seq1  TTGCTTGATAGGTCCTTATTGTACAATCCAGACTGGCCTTAAACTCACCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTGATAGGTCCTTATTGTACAATCCAGACTGGCCTTAAACTCACCA  550

seq1  TGCATCCCAGACTGACCTCAAACTCAGAGTCTTGCCTTAGATGCTGGGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCCCAGACTGACCTCAAACTCAGAGTCTTGCCTTAGATGCTGGGAT  600

seq1  TACAAGCATATCCCACCATGCCCAGATTTCTAACTCAGGCTCTAATGCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGCATATCCCACCATGCCCAGATTTCTAACTCAGGCTCTAATGCTA  650

seq1  AGCAGTCATTCTATCCCTGAGAACATTTGCTGCCATGATTCCTTTTCATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTCATTCTATCCCTGAGAACATTTGCTGCCATGATTCCTTTTCATG  700

seq1  TTCTTTTTGTCTTGATATTAGAATTTTATTCAGGCCGCCCTCCTAATTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTGTCTTGATATTAGAATTTTATTCAGGCCGCCCTCCTAATTTC  750

seq1  TTC-TTTTTCTTTATTCTTGTATTCCTTTGTTTCTTTGAACATATTTAAG  799
      ||| ||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TTCTTTTTTCTTTATTC-TGTATTCCTTTGTTTCTTTGAACATATTTAAG  799

seq1  ACAATTGTTTCAAATCAGTCTACAAAGTCCAGT-GCCTATGCTTCTTTAG  848
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ACAATTGTTTCAAATCAGTCTACAAAGTCCAGTGGCCTATGCTTCTTTAG  849

seq1  AAAATCTCTACCACTGTTTTCTTCC-TTTGACT-GAGCCATATTATGTTA  896
      |||||||||||||||| |||||||| ||||||| ||||||||||||| ||
seq2  AAAATCTCTACCACTGGTTTCTTCCTTTTGACTGGAGCCATATTATGGTA  899

seq1  TAGTTGTTTTTCATCCATGTCCCTGGTAGGATTTATGTTGAAACTTGGGG  946
      ||  || |||||||||||||||||||||||||||||| || |||||||||
seq2  TAAGTG-TTTTCATCCATGTCCCTGGTAGGATTTATG-TGGAACTTGGGG  947

seq1  CTAGAAAACTAGCAGCCT-CTCTCAGTCTTTATACTCTGATTCTTCCTGG  995
      |||  ||||||||||||| |||||||||||||||||||||||||||||||
seq2  CTAAGAAACTAGCAGCCTCCTCTCAGTCTTTATACTCTGATTCTTCCTGG  997

seq1  G-ACATTCTTCGTAGAATAGCTGA-CACATTTTGAGTCTTGGGATTGGTA  1043
      | ||||||||||||||   ||||| |||||||||||||||||||||||||
seq2  GAACATTCTTCGTAGATAGGCTGACCACATTTTGAGTCTTGGGATTGGTA  1047

seq1  TAAGATGAAAGCTTAAGGTCTGCTTATGTGTGGCCCAAGAAGTTTAGCTT  1093
      |||||||||||| |||||||||||||||||||| ||| ||||  ||||||
seq2  TAAGATGAAAGC-TAAGGTCTGCTTATGTGTGGGCCAGGAAG--TAGCTT  1094

seq1  AGCTTCACCTT  1104
      ||| |||||||
seq2  AGCCTCACCTT  1105