BAC Information

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BAC

Clone NameB6Ng01-068M23
Chromosome2 (Build37)
Map Location 143,841,239 - 143,842,338
singlet/doubletsinglet
Overlap genenone
Upstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
Downstream gene4930517K23Rik, LOC627160, EG433481, Snx5, 8430406I07Rik, Ovol2, Ppia-ps2_1789.1, LOC635097, Csrp2bp, LOC100043552, 6330439K17Rik, Polr3f, Rbbp9, Sec23b, Gm561, Dtd1, 1700010M22Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068M23.bB6Ng01-068M23.g
ACCDH887291DH887292
length1,0951,240
definitionDH887291|Mus musculus domesticus DNA, BAC clone: B6Ng01-068M23, 5' end.DH887292|Mus musculus domesticus DNA, BAC clone: B6Ng01-068M23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagttcccacactcacaggtggctcacaactatctgtaattccaa
tcctggggacccagcatcctctcctgacctctgcaggcaccaggcatgca
ggtggtgctctctctctcacacacacacacacacacacacacacacacac
acacacacacacacacgccaggcaaaacactcgtacacagaaaataaaca
aataaataactgtttaatttttcaaaaaaggtagggtaaaatatacaata
tttttagggcttgccatgaactatgcattaatttaagcaccctacaaatg
tgtaaactcatctaaccttcagaatggaccaaatggttttataactctct
ccattttaaagacgagaaacccgaggctctgagagggtgagtaacctgcc
cactatcccaaggcacagtcagagaagcagtgattgcctgcagagcccat
atacataaggattgcacactggaaggagctctgtgcctctggggagaaca
gaggctgttcttctggtggtagccactcaacgaagggtcggtgcacggca
tctacgatcattctctcagcatgatcttcgagtaaccgagacccaactag
gctggggacccactgggttgggagaggacccatcaaaataattcaactaa
gaagtaacatgagatcttggaagggttcagatggggtggtattcgtgtgt
ttagaaggtgatgggaacagggcttggtgaacccaggtgagggagagata
ggagtcatctttgagctgagctttctggcctgagggatagggtcatgtgg
tgtcacttctgggacagaatacttagcacagtacacatggtgttaaatga
gggctcctgggggaagtcctgagggaggtacaacaggcaacgccttactt
aggctccaccacacattctgagacacccaacattgggtgattgcattcca
caaacagcttaaatgtaccacacaaacttagacgttacagcatcattagg
tcatacaataggaccattttgtatatgcaccaatattctgtcattacatt
attgttttgtgagctgacgttcaggtctgagcagaatttggaagc
gaattcctccgcatttttggaagataggtgggaaacagggagaaggagtg
accggctcttgtagtacaaggccaattggcttttttatttgggtgggagg
cagtgaaaggcttgccctttcaatagtacgtctccaatctctctcccccc
tattaattaagttaaataaggcaacgcttaactgaggtgatcaaatgatt
ttctcatccgtagatgagtgggcttttaaccttggcttgggtggacatgg
acccgattcctcccgtgggtaaaacccacacatgtggctctcggtacctt
ttggggaggcgaggtagagccggagaatattttttatttttaaccaaaat
ttggtaccaacctctttcaaaccgggtttatctcacaggaaactcagaaa
tggtcaagccggaccttcccttgcagtaagtatctctgcaccaagcggtg
cccatactgaatttgtacaatcacaaaccagtatgcacagttctgagtgc
tgtgcagctcctaaaggagaattatcaacctcagaattagcaaagcctaa
gcaagaattatgtcgttaataacaccacgatttgtgggtaaaataggagc
tggaagtcgttcctcctcatccctgttttttccacagcctattgagctaa
ggacaccttgcagtaacagcaagggtgaaaagccagaggtcagctaaggg
gctaagcctgtctaccaaaataaaaaccaatctttattgatatagaaaaa
tctactcttctagccctctaggtaaacctaaatttttaactcagactgaa
agccacatgctggaaatgtcctgagactgggggtaacagctgccgcctgt
gtgctctaggggggcggggatgcacatccgctggtccgcctcgggaatgt
tgatttacctgctgaagacaaatcttgaaagacagtgagaaagtaggaaa
gcagaccttctttcggggagtctaagtactttatttaaatgcaaatggta
agctgaggctagtcttcgggcctccttgtgggagctggttagagagtagc
tggagaaaccaaaccagctttgagagctgtgcctctcagctgaacttaag
cacaataagaattaagtcttaaatgatactctactagaagaatcgattgg
ttcatctgacgaataatctcttggacacggcttcattgcatcggaacaac
ctgagcccatcatatagaactggatcgtgagcctctccat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_143841239_143842338
seq2: B6Ng01-068M23.b_44_1138

seq1  GAATTCAGTTCCCACACTCACAGGTGGCTCACAACTATCTGTAATTCCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTCCCACACTCACAGGTGGCTCACAACTATCTGTAATTCCAA  50

seq1  TCCTGGGGACCCAGCATCCTCTCCTGACCTCTGCAGGCACCAGGCATGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGGGACCCAGCATCCTCTCCTGACCTCTGCAGGCACCAGGCATGCA  100

seq1  GGTGGTGCTCTCTCTCTCACACACACACACACACACACACACACACACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTGCTCTCTCTCTCACACACACACACACACACACACACACACACAC  150

seq1  ACACACACACACACACGCCAGGCAAAACACTCGTACACAGAAAATAAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACGCCAGGCAAAACACTCGTACACAGAAAATAAACA  200

seq1  AATAAATAACTGTTTAATTTTTCAAAAAAGGTAGGGTAAAATATACAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATAACTGTTTAATTTTTCAAAAAAGGTAGGGTAAAATATACAATA  250

seq1  TTTTTAGGGCTTGCCATGAACTATGCATTAATTTAAGCACCCTACAAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAGGGCTTGCCATGAACTATGCATTAATTTAAGCACCCTACAAATG  300

seq1  TGTAAACTCATCTAACCTTCAGAATGGACCAAATGGTTTTATAACTCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAACTCATCTAACCTTCAGAATGGACCAAATGGTTTTATAACTCTCT  350

seq1  CCATTTTAAAGACGAGAAACCCGAGGCTCTGAGAGGGTGAGTAACCTGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTAAAGACGAGAAACCCGAGGCTCTGAGAGGGTGAGTAACCTGCC  400

seq1  CACTATCCCAAGGCACAGTCAGAGAAGCAGTGATTGCCTGCAGAGCCCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATCCCAAGGCACAGTCAGAGAAGCAGTGATTGCCTGCAGAGCCCAT  450

seq1  ATACATAAGGATTGCACACTGGAAGGAGCTCTGTGCCTCTGGGGAGAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATAAGGATTGCACACTGGAAGGAGCTCTGTGCCTCTGGGGAGAACA  500

seq1  GAGGCTGTTCTTCTGGTGGTAGCCACTCAACGAAGGGTCGGTGCACGGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTGTTCTTCTGGTGGTAGCCACTCAACGAAGGGTCGGTGCACGGCA  550

seq1  TCTACGATCATTCTCTCAGCATGATCTTCGAGTAACCGAGACCCAACTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACGATCATTCTCTCAGCATGATCTTCGAGTAACCGAGACCCAACTAG  600

seq1  GCTGGGGACCCACTGGGTTGGGAGAGGACCCATCAAAATAATTCAACTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGGACCCACTGGGTTGGGAGAGGACCCATCAAAATAATTCAACTAA  650

seq1  GAAGTAACATGAGATCTTGGAAGGGTTCAGATGGGGTGGTATTCGTGTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAACATGAGATCTTGGAAGGGTTCAGATGGGGTGGTATTCGTGTGT  700

seq1  TTAGAAGGTGATGGGAACAGGGCTTGGTGAACCCAGGTGAGGGAGAGATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAGGTGATGGGAACAGGGCTTGGTGAACCCAGGTGAGGGAGAGATA  750

seq1  GGAGTCATCTTTGAGCTGAGCTTTCTGGCCTGAGGGATAGGGTCATGTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCATCTTTGAGCTGAGCTTTCTGGCCTGAGGGATAGGGTCATGTGG  800

seq1  TGTCACTTCTGGGACAGAATACTTAGCACAGTACACATGGTGTTAAATGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACTTCTGGGACAGAATACTTAGCACAGTACACATGGTGTTAAATGA  850

seq1  AGGCTCCTGGGGGAAGTCCTGAGGGAGGTACAACAGGCAACGCCTTACTT  900
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTCCTGGGGGAAGTCCTGAGGGAGGTACAACAGGCAACGCCTTACTT  900

seq1  AGGCTCCACCACACATTCTGAGACACCCAACATTGGGTGATTGCATTCCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCCACCACACATTCTGAGACACCCAACATTGGGTGATTGCATTCCA  950

seq1  CAAACAGCTTAGAATGTACCACACAAACTTAAGACGGTTACAGCATCATT  1000
      ||||||||||| |||||||||||||||||| |||| ||||||||||||||
seq2  CAAACAGCTTA-AATGTACCACACAAACTT-AGAC-GTTACAGCATCATT  997

seq1  AGGTCATACAATAGGACCATTTTGTATATGCACCAATA-TCTGTCATTAC  1049
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AGGTCATACAATAGGACCATTTTGTATATGCACCAATATTCTGTCATTAC  1047

seq1  ACTATTGTTTTGTGGAGCTGACGTTCAGGGTCTGAGGCAGAATTTGGAAG  1099
      | ||||||||||| ||||||||||||| ||||||| ||||||||||||||
seq2  ATTATTGTTTTGT-GAGCTGACGTTCA-GGTCTGA-GCAGAATTTGGAAG  1094

seq1  C  1100
      |
seq2  C  1095