BAC Information

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BAC

Clone NameB6Ng01-069I16
Chromosome2 (Build37)
Map Location 80,562,765 - 80,563,859
singlet/doubletsinglet
Overlap genenone
Upstream genePpp1r1c, Pde1a, LOC668005, Prdx6-rs1, Dnajc10, Frzb, Nckap1, LOC624223, Dusp19, LOC672381, Nup35
Downstream geneLOC103324, LOC668027, LOC100040624, LOC100040655, LOC100040704
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069I16.bB6Ng01-069I16.g
ACCDH887817DH887818
length1,1361,082
definitionDH887817|Mus musculus domesticus DNA, BAC clone: B6Ng01-069I16, 5' end.DH887818|Mus musculus domesticus DNA, BAC clone: B6Ng01-069I16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaagtgagtgaataccaaatggctgagaagcacctgacaaaat
gttcaacacccttaatcatcagggaaatgcaaataaaaacaaccatgaga
ttccacctaacacaagtcagaatggctaagatcaaaaacttaggtgacag
cagatgctggcaaagatgtggagagaggaacactcctccattgctggtgg
gattgcaagctggtacaactactctggaaatcagtctggcagttcctcag
aaaattggacatagtactaccagaagatccagcaagacatctcctgggca
tatactcagaagatgttccaacatgtaataaggacgcatgctccactatg
ttcatagcagccttatttataatagccaaaagctggaaagaacccagatg
ctcctcaacagactaatggatacagaaaatgtggtacatttacacaatgg
agtactactcagctattaaaaacaatgaatttatgaaattcttgggtaaa
tggatgtatctggaggatatcatcctgagtgaggtgacccaatcacaaaa
gaagtcacttcatatgcactcactgataagtggatattagaccagaaact
tagaatatccaagacgcaatttgcaaaacacaagaaaatcaagaagaagg
aagacaaacatgtggatacttcattcctccttagaagggggaacaaaata
cccatggaaggagttacagagacaaagtttggagctgagacagaaggacc
atccagtgattactccacttggggatccatcccataaaccaccaccaaac
ccagacactattgcttatgccagaaacattttgctgacaggacactgata
tagctgtctcttgtgaggctatgccagtgcctggcaaatacagaagtgga
tgctcacaatcatctattgcatggcacacagggccccatgaaggagctag
agaaagtacccaaggagctaaagggtctgcaaccctatagaagaacaaca
atatgactaaccagtacccccagagcttgtatctctagtgcatatgtagc
agaggatgctaatcggccatcaaagggaggaagagccagtacaaggaatg
ccagggccaggatccaggatggggtggtgtgtgaga
gaattcctgccctgacgacttcatgcttcatgatggattgtgatgtggaa
atgtaggctgagataaaccctttgctccccaagttgctttgggtcatgat
gttttatcacagcaataggaaccctaaataagacagtagttgatctttgt
gtttctttttagattggacagtctcctcattatctctttacctatgctat
tgaattgttttgtctcacacatttgcctctttgctttgttttgatgtttc
aattattcaatttcagaatctactcatgtggtgatttgaagcttggtcca
ggggtggcactatttggaggtgtggccttgttggagtagatgtggcttgt
tagagaaagtgtgtcactgtgggcatgggctttaagacccttgtcttagc
tgcctagaagccagtcttctgttgcctccggaaccagatgttgaactttc
agctcctcctgcatcatgcctgcctgggtgctgccatgctctggccttga
taataatggactgaacctctaaacctgtaagccagtcccaattaaatgtt
ttccttataagagttgccttgattgtggtgtttgttcacatcagtaaaac
cctaactaagacaacttataaaaaaagttttagaagtttgactagatgtg
ccttcaagttttcaagtcagaatattttgtaggtggttctctgtattttc
ctaccttattacatttacgagatacaatgtcaggatgtcccacttcttct
cacattaaccatcatcagtagttttgtggtgaccacagactgatgctcct
cactgaaaacttgaatgccaatttcctaatattttatttattgataataa
tctagatggatgactttattaggggtacacaataatgatatacttcccac
ctcttaatattttaactgtaatcctattatttcttttattatttgccttt
gtataatatatcccactgcagccccccctcactcctccagtgtctccaac
actcccttcttccccaggtcactactctctctttctttcagaaaaaagga
ggctttcagggtatacaactgacttggcacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_80562765_80563859
seq2: B6Ng01-069I16.g_70_1151

seq1  GAATTCCTGCCCTGACGACTTCATGCTTCATGATGGATTGTGATGTGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGCCCTGACGACTTCATGCTTCATGATGGATTGTGATGTGGAA  50

seq1  ATGTAGGCTGAGATAAACCCTTTGCTCCCCAAGTTGCTTTGGGTCATGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGGCTGAGATAAACCCTTTGCTCCCCAAGTTGCTTTGGGTCATGAT  100

seq1  GTTTTATCACAGCAATAGGAACCCTAAATAAGACAGTAGTTGATCTTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTATCACAGCAATAGGAACCCTAAATAAGACAGTAGTTGATCTTTGT  150

seq1  GTTTCTTTTTAGATTGGACAGTCTCCTCATTATCTCTTTACCTATGCTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTTTTTAGATTGGACAGTCTCCTCATTATCTCTTTACCTATGCTAT  200

seq1  TGAATTGTTTTGTCTCACACATTTGCCTCTTTGCTTTGTTTTGATGTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTGTTTTGTCTCACACATTTGCCTCTTTGCTTTGTTTTGATGTTTC  250

seq1  AATTATTCAATTTCAGAATCTACTCATGTGGTGATTTGAAGCTTGGTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTCAATTTCAGAATCTACTCATGTGGTGATTTGAAGCTTGGTCCA  300

seq1  GGGGTGGCACTATTTGGAGGTGTGGCCTTGTTGGAGTAGATGTGGCTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGGCACTATTTGGAGGTGTGGCCTTGTTGGAGTAGATGTGGCTTGT  350

seq1  TAGAGAAAGTGTGTCACTGTGGGCATGGGCTTTAAGACCCTTGTCTTAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAAAGTGTGTCACTGTGGGCATGGGCTTTAAGACCCTTGTCTTAGC  400

seq1  TGCCTAGAAGCCAGTCTTCTGTTGCCTCCGGAACCAGATGTTGAACTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTAGAAGCCAGTCTTCTGTTGCCTCCGGAACCAGATGTTGAACTTTC  450

seq1  AGCTCCTCCTGCATCATGCCTGCCTGGGTGCTGCCATGCTCTGGCCTTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCTCCTGCATCATGCCTGCCTGGGTGCTGCCATGCTCTGGCCTTGA  500

seq1  TAATAATGGACTGAACCTCTAAACCTGTAAGCCAGTCCCAATTAAATGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATGGACTGAACCTCTAAACCTGTAAGCCAGTCCCAATTAAATGTT  550

seq1  TTCCTTATAAGAGTTGCCTTGATTGTGGTGTTTGTTCACATCAGTAAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTATAAGAGTTGCCTTGATTGTGGTGTTTGTTCACATCAGTAAAAC  600

seq1  CCTAACTAAGACAACTTATAAAAAAAGTTTTAGAAGTTTGACTAGATGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACTAAGACAACTTATAAAAAAAGTTTTAGAAGTTTGACTAGATGTG  650

seq1  CCTTCAAGTTTTCAAGTCAGAATATTTTGTAGGTGGTTCTCTGTATTTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAAGTTTTCAAGTCAGAATATTTTGTAGGTGGTTCTCTGTATTTTC  700

seq1  CTACCTTATTACA-TTACGAGATACAATGTCAGGATGTCCCACTTCTTCT  749
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CTACCTTATTACATTTACGAGATACAATGTCAGGATGTCCCACTTCTTCT  750

seq1  CACATTAACCATCATCAGTAG-TTTGTGGTGACCACAGACTGATGCTCCT  798
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CACATTAACCATCATCAGTAGTTTTGTGGTGACCACAGACTGATGCTCCT  800

seq1  CACTGAAAACTTGAATGCCAATTTCCTAATATTTTATTTATTGATAATAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAAAACTTGAATGCCAATTTCCTAATATTTTATTTATTGATAATAA  850

seq1  TCTAGATGGATGACTTTATTAGGGGTACACAATAATGATATACTTCCCAC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGATGGATGACTTTATTAGGGGTACACAATAATGATATACTTCCCAC  900

seq1  CTCTTTAATATTTTTAACTGTAATTCTATTTTATTTTCTTTTATTTATTT  948
      ||| |||||| ||||||||||||| |||||    ||||||||| ||||||
seq2  CTC-TTAATA-TTTTAACTGTAATCCTATT---ATTTCTTTTA-TTATTT  944

seq1  GCCTTTGTATAATATATCCCAACTGCAGCCCCCCCCTCACTCCTCCCAGT  998
      |||||||||||||||||||| ||||||| ||||||||||||||| |||||
seq2  GCCTTTGTATAATATATCCC-ACTGCAG-CCCCCCCTCACTCCT-CCAGT  991

seq1  GCCTCCCACACCTCCCTTCTCCCCCAGGTCCACTACTTCTCTCTTTCCTT  1048
      | |||| ||| ||||||||| |||||||| |||||| ||||||||| |||
seq2  GTCTCCAACA-CTCCCTTCTTCCCCAGGT-CACTAC-TCTCTCTTT-CTT  1037

seq1  TCAGAAAAGAGGAGGCTTTCCAGGGATACCAACTGAACATGGCACAA  1095
      |||||||| |||||||||||  || ||| |||||| || ||||||||
seq2  TCAGAAAAAAGGAGGCTTTCAGGGTATA-CAACTG-ACTTGGCACAA  1082