BAC Information

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BAC

Clone NameB6Ng01-070A22
Chromosome2 (Build37)
Map Location 142,776,688 - 142,777,696
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070A22.bB6Ng01-070A22.g
ACCDH888175DH888176
length5511,241
definitionDH888175|Mus musculus domesticus DNA, BAC clone: B6Ng01-070A22, 5' end.DH888176|Mus musculus domesticus DNA, BAC clone: B6Ng01-070A22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagaccctttcccaatctcttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggtttttgttcctttgtcgaagatcaagt
gaccataggtgtgtgggttcatttcggggtcttcaattctattccattgg
t

gaattctcctctgaagaaacagactgggaggaaaaagcagctcattatga
gaaaaaagggtaccagccaggtaaagtgctagctaatcagttaaggaagc
caaaagcggctggcgaaggccagtttgctgattggcctcagggcagtcgg
cttcaaggtccgccctatgcggagtccccgccctgcgtagtgcgtcagca
atgcgcagagaggcaatgcgcagagagatgcgcagagaggcaatgcgcag
agagatgcgcagagaggcagtgcgcagagaggcagtgcgcagagaggcag
tgcgcagactcattcattcccagagaggaacaaaggaaaatacaacaggc
atttccagtctttgaaggagccgagggtgggcgtgtccacgctccggtag
aatacttacaaattaaagaacttgccgagtcggtccgtaaatacggaacc
aatgctaattttaccttggtgcagttagacaggctcgccggcatggcact
aactcctgccgactggcaaacggttgtaaaagccgctctccctagtatgg
gcaaatatatggaatggagagctctttggcatgaaactgcacaagcgcag
gcccgagcaaacgcagctgctttgactccagagcagagagattggacttt
tgacttgttaacgggtcagggagcttattctgctgatcaaacaaactacc
attggggagcttatgcccagatttcttccacggctattagggcctggaag
gcgctctcccgagcaggtgaaaccactggtcaattaacaaaagttgtcca
gggacctcaggaatccttctcagattttgtggccagaatgacagaggcag
cagagcgtatttttggagattcagagcaagccgcgcctctggtagaacag
ctaatctatgagcaagccacaaaggagtgccgagcggccatagccccaag
aaagacaaaggcttacagactggctcaggtctgtcgagagcttgggggac
tctcaccaatgcaggctagcggccgcatccttcatctcagaaccgctcca
tgggcagaatgatcagagacatgtttttaattgcggaaaggcttggcatt
taagaaaggattgccaagctccagaataacagggaggacctctcactctt
ttgctctaagtgtgccaagtaatccatagaacctgaacatgttcgcctct
gtgaagggatcaaaaggcgcagagaattcttttctctcaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776688_142777696
seq2: B6Ng01-070A22.b_42_590 (reverse)

seq1  ACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATGGT  50
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ACCAATGGAATAGAATTGAAGACCCCGAAATGAACCCACACACCTATGGT  50

seq1  CACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGAGGAAGAAAGACAG  100
      ||||||||||||||||| ||| | |||||||||||| |||||||||||||
seq2  CACTTGATCTTCGACAAAGGAACAAAAACCATCCAGTGGAAGAAAGACAG  100

seq1  CATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAA  150

seq1  TGGGAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATCTAAGTGG  200
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATCTAAGTGG  200

seq1  ATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAA  250

seq1  AGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGACAAATTCCTGAACA  300
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAAAATTCCTGAACA  300

seq1  GAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATGGGACCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATGGGACCTA  350

seq1  ATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAA  400

seq1  AAGACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATA  450
      ||||||||||| ||||||||||||| ||||||||||||||||||||||||
seq2  AAGACCACCAAGAGATTGGGAAAGGGTCTTTACCTATCCTAAATCAGATA  450

seq1  GGGGACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGACTTCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGACTTCAGA  500

seq1  AAATCAAATAACCCCATTAAAAAATGGGGCTCACAAAACCATCCAGTGGA  550
      ||||||||||||||||||||||||||||||||| ||            ||
seq2  AAATCAAATAACCCCATTAAAAAATGGGGCTCAGAA----------CTGA  540

seq1  AGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCA  600
      | |||||                                           
seq2  ACAAAGAAT-----------------------------------------  549

seq1  TGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACTAAGGTCAA  650
                                                        
seq2  --------------------------------------------------  549

seq1  ATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTA  700
                                                        
seq2  --------------------------------------------------  549

seq1  TAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAAAA  750
                                                        
seq2  --------------------------------------------------  549

seq1  TTCCTGAACAGAAGAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAA  800
                                                        
seq2  --------------------------------------------------  549

seq1  ATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACTGTCT  850
                                                        
seq2  --------------------------------------------------  549

seq1  ATAAGACAAAAAGACCACCAACAGACTGGGAAAGGATCTTTACCTATCCT  900
                                                        
seq2  --------------------------------------------------  549

seq1  AAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAAGAAGGT  950
                                                        
seq2  --------------------------------------------------  549

seq1  GGACCTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAACTGA  1000
                                                        
seq2  --------------------------------------------------  549

seq1  ACAAAGAAT  1009
               
seq2  ---------  549


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