BAC Information

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BAC

Clone NameB6Ng01-070F21
Chromosome2 (Build37)
Map Location 59,657,240 - 59,827,229
singlet/doubletdoublet
Overlap geneTanc1, Wdsub1, Baz2b
Upstream geneBC062650, Pkp4, LOC625354, 2310032F03Rik, LOC100038999, LOC100039016
Downstream geneLOC667103, LOC667106, Ldha-ps, LOC100039092, March7, Cd302, LOC625861, Ly75, LOC100039176, Pla2r1, Itgb6, Rbms1, ENSMUSG00000075325
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070F21.bB6Ng01-070F21.g
ACCDH888393DH888394
length1,1661,157
definitionDH888393|Mus musculus domesticus DNA, BAC clone: B6Ng01-070F21, 5' end.DH888394|Mus musculus domesticus DNA, BAC clone: B6Ng01-070F21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,657,240 - 59,658,404)(59,826,066 - 59,827,229)
sequence
gaattctagaatcaaagtcccgaagagggtacgatttcctatcaccatca
gagtaaatgcccaaatgttctgcacacacttaatcagaaatctaaaactg
agatgagcacaggtcaggcttctctctgaacgctcccagaagggccttta
tggctttgctagcttctagaagccactgccttccagctaaggctgcttcc
tccatcttcgagtccacaacctcccttgctgcccctccctcttactccct
ccttagatcctgatgcctcctgtccaatcctaagaatgctgtggttgtgc
caggtaagcagcagactgtacacccacagaattgctccatttcaaggcct
gtgatttcctcctgctatttacggagcttggcgcatcctcggattagacc
cagtcagcatactgtaaacagtatggattgggagcctggagaatggcttt
gtcccagtcgcctgtcactcgggatgctgcaggctctggtctagcgggta
cagatacttcagctctcctgcctccagcttgggacctgctctgcttttta
acaggaagatgctcagaagggagaggaacagagctgtcaggagaaaaatc
acctggacagtactgaaagaaaaatttcactgttaaaagaaaatcgcacc
ctgttttctttccttgtgaagaatggcctaatggtgacttatgcagaaac
tgcactttatgtgatctgctgggtcctttgttgattacattggcatattt
gggtcatgttggaattcattagaattctgagtacctgctaatcctgaaca
gagttgctgcaattccctgagattgttgtattttttaattctccccagtg
aaagtgtgaatggcatacgaattatgccgggaaatggctttcattatgtt
ttcttcacttgcacagcacaagataataatggttaaaaacaacactcttt
cctttgatctatgggctataataagcacccattgctccgaggagctcatt
aaatcaccttgccacgtctgacaagtcgtccagtccttgctgggaatggc
agaggaacatgaaatcgaagtcaacggcaccgacacgtttgggggagaaa
caagtaattatgcttccattgtttgtagtcagcaacccggtgcgtggacg
ttccagccccgctgtg
gaattcctgtctcaagaaagaaaataaatgaatgactagaatctacttgt
attccatacatctttctaaatattaagacataaggctgcagtggctccaa
ataagagaatacaagaatgaaatgaagattatttgtggaaaaatgttctg
tccacacgaactaaagaattctttttgttgtttgttcattaaagttcaaa
tttatatctcccttactttgagtttcaaatacgtaagcattgaaatggtt
aagaattcaatgtattaactgataattgagttattccattgatagcattt
cagttatgtttgttttgacctatatgctcccttattgctgatctatatgg
ggtgtagctgaatgaatgccagtttctaggatgagcagtgctgtgcagat
tacaagccagagactgattccgcagtgatgtaaatcacgtcagcagtgta
aagatgtaggcctggagcagcagctctgtgcagcattgaaagatcgagag
cagctctggcacgcagaaaaacaacctgtatagaaagctctcattgggtt
ttgttgtttctgtttttaaagattagatgtttcccatactggtttcttat
atcagctatgtttactgttgacttttggacttttacacagtgataggaga
ctttgcacacaggcactttaggctcgggattacttcagtctgtctgtgta
tcgttctttgcttccggtgaggtggaaagaccttattgttcacggagagt
aacaaacgtgcttggtaacaaagacttttataataccattcctcatgact
gacacattggcgtttgtgtgtcacctgatagacttgaaaagttgtgctaa
aaactatccagcttatcatttaagaatcttaacattgccactgtacatac
attttcattatctaagttgtccatggttatgtatcatcagttaaacaaaa
actaaaagtgaaataacatttgcacgcacagcatgcagtctgagcatctt
cggtcaaaggagtaatactgccttaatcgtttaagtgggcagaaattttc
ctctaagaaaactcgtttttaatcagatactttgatttggggacattatt
caacataagtattagatgtagaaaaaattactgtctactagagactttct
aatattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_59657240_59658404
seq2: B6Ng01-070F21.b_41_1206

seq1  GAATTCTAGAATCAAAGTCCCGAAGAGGGTACGATTTCCTATCACCATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGAATCAAAGTCCCGAAGAGGGTACGATTTCCTATCACCATCA  50

seq1  GAGTAAATGCCCAAATGTTCTGCACACACTTAATCAGAAATCTAAAACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAAATGCCCAAATGTTCTGCACACACTTAATCAGAAATCTAAAACTG  100

seq1  AGATGAGCACAGGTCAGGCTTCTCTCTGAACGCTCCCAGAAGGGCCTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAGCACAGGTCAGGCTTCTCTCTGAACGCTCCCAGAAGGGCCTTTA  150

seq1  TGGCTTTGCTAGCTTCTAGAAGCCACTGCCTTCCAGCTAAGGCTGCTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTTGCTAGCTTCTAGAAGCCACTGCCTTCCAGCTAAGGCTGCTTCC  200

seq1  TCCATCTTCGAGTCCACAACCTCCCTTGCTGCCCCTCCCTCTTACTCCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCTTCGAGTCCACAACCTCCCTTGCTGCCCCTCCCTCTTACTCCCT  250

seq1  CCTTAGATCCTGATGCCTCCTGTCCAATCCTAAGAATGCTGTGGTTGTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGATCCTGATGCCTCCTGTCCAATCCTAAGAATGCTGTGGTTGTGC  300

seq1  CAGGTAAGCAGCAGACTGTACACCCACAGAATTGCTCCATTTCAAGGCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTAAGCAGCAGACTGTACACCCACAGAATTGCTCCATTTCAAGGCCT  350

seq1  GTGATTTCCTCCTGCTATTTACGGAGCTTGGCGCATCCTCGGATTAGACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTTCCTCCTGCTATTTACGGAGCTTGGCGCATCCTCGGATTAGACC  400

seq1  CAGTCAGCATACTGTAAACAGTATGGATTGGGAGCCTGGAGAATGGCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCAGCATACTGTAAACAGTATGGATTGGGAGCCTGGAGAATGGCTTT  450

seq1  GTCCCAGTCGCCTGTCACTCGGGATGCTGCAGGCTCTGGTCTAGCGGGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCAGTCGCCTGTCACTCGGGATGCTGCAGGCTCTGGTCTAGCGGGTA  500

seq1  CAGATACTTCAGCTCTCCTGCCTCCAGCTTGGGACCTGCTCTGCTTTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATACTTCAGCTCTCCTGCCTCCAGCTTGGGACCTGCTCTGCTTTTTA  550

seq1  ACAGGAAGATGCTCAGAAGGGAGAGGAACAGAGCTGTCAGGAGAAAAATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAAGATGCTCAGAAGGGAGAGGAACAGAGCTGTCAGGAGAAAAATC  600

seq1  ACCTGGACAGTACTGAAAGAAAAATTTCACTGTTAAAAGAAAATCGCACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGACAGTACTGAAAGAAAAATTTCACTGTTAAAAGAAAATCGCACC  650

seq1  CTGTTTTCTTTCCTTGTGAAGAATGGCCTAATGGTGACTTATGCAGAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTCTTTCCTTGTGAAGAATGGCCTAATGGTGACTTATGCAGAAAC  700

seq1  TGCACTTTATGTGATCTGCTGGGTCCTTTGTTGATTACATTGGCATATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTTTATGTGATCTGCTGGGTCCTTTGTTGATTACATTGGCATATTT  750

seq1  GGGTCATGTTGGAATTCATTAGAATTCTGAGTACCTGCTAATCCTGAACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCATGTTGGAATTCATTAGAATTCTGAGTACCTGCTAATCCTGAACA  800

seq1  GAGTTGCTGCAATTCCCTGAGATTGTTGTATTTTTTAATTCTCCCCAGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGCTGCAATTCCCTGAGATTGTTGTATTTTTTAATTCTCCCCAGTG  850

seq1  AAAGTGTGAATGGCATACGAATTATGCCGGGAAATGGCTTTCATTATGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGTGAATGGCATACGAATTATGCCGGGAAATGGCTTTCATTATGTT  900

seq1  TTCTTCACTTGCACAGCACAAGATAATAATGGTTAAAAAACAACACTCTT  950
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTCTTCACTTGCACAGCACAAGATAATAATGGTT-AAAAACAACACTCTT  949

seq1  TCCTTTGATCTATGGGCTATAATAAGCACCCATTGCTCCGA-GAGCTCAT  999
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TCCTTTGATCTATGGGCTATAATAAGCACCCATTGCTCCGAGGAGCTCAT  999

seq1  TAAATCACCTTGCCACGTCTGACAGGTCGTCCAGTCCTTGCTGGGAATGG  1049
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TAAATCACCTTGCCACGTCTGACAAGTCGTCCAGTCCTTGCTGGGAATGG  1049

seq1  CAGAGGAACATGAAATCGAAGTCAACGGCACCGACACGTTGTGGGGAGAA  1099
      ||||||||||||||||||||||||||||||||||||||||  ||||||||
seq2  CAGAGGAACATGAAATCGAAGTCAACGGCACCGACACGTTTGGGGGAGAA  1099

seq1  ACAGGTAATTATGCTTCCAGTGTTTGTAGTCAGCAGCCGCGTGCGT-GAC  1148
      ||| ||||||||||||||| ||||||||||||||| ||  |||||| |||
seq2  ACAAGTAATTATGCTTCCATTGTTTGTAGTCAGCAACCCGGTGCGTGGAC  1149

seq1  GTCCCAGCCCCGCTGTG  1165
      || ||||||||||||||
seq2  GTTCCAGCCCCGCTGTG  1166

seq1: chr2_59826066_59827229
seq2: B6Ng01-070F21.g_66_1222 (reverse)

seq1  GAATATTAGAAAGT-TCTAGTTTTGGAACAGTAATTTTTTTCTACATCTA  49
      |||||||||||||| ||||||      ||||||| |||||||||||||||
seq2  GAATATTAGAAAGTCTCTAGT----AGACAGTAA-TTTTTTCTACATCTA  45

seq1  TATACCTAATGTTGATATATGCTCCCAAATCAAAGTATCCTGATTAAAAA  99
       ||| || |||||||   |||  ||||||||||||||| |||||||||||
seq2  -ATA-CTTATGTTGAATAATGTCCCCAAATCAAAGTAT-CTGATTAAAAA  92

seq1  CGAGTTTTCTTAGA-GAAAATGTCTGCACACTTAGACGATTAAGGCAGTA  148
      |||||||||||||| |||||| ||||| |||||| |||||||||||||||
seq2  CGAGTTTTCTTAGAGGAAAATTTCTGCCCACTTAAACGATTAAGGCAGTA  142

seq1  TTACTCCTTTGACCGAAGATGCTCAGACTGCATGCTGTGCGTGCAAATGT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCCTTTGACCGAAGATGCTCAGACTGCATGCTGTGCGTGCAAATGT  192

seq1  TATTTCACTTTTAGTTTTTGTTTTAACTGATGATACATAACCATGGACAA  248
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TATTTCACTTTTAGTTTTTG-TTTAACTGATGATACATAACCATGGACAA  241

seq1  CTTAGATAATGAAAATGTATGTACAGTGGCAATGTTAAGATTCTTAAATG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGATAATGAAAATGTATGTACAGTGGCAATGTTAAGATTCTTAAATG  291

seq1  ATAAGCTGGATAGTTTTTAGCACAACTTTTCAAGTCTATCAGGTGACACA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCTGGATAGTTTTTAGCACAACTTTTCAAGTCTATCAGGTGACACA  341

seq1  CAAACGCCAATGTGTCAGTCATGAGGAATGGTATTATAAAAGTCTTTGTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACGCCAATGTGTCAGTCATGAGGAATGGTATTATAAAAGTCTTTGTT  391

seq1  ACCAAGCACGTTTGTTACTCTCCGTGAACAATAAGGTCTTTCCACCTCAC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGCACGTTTGTTACTCTCCGTGAACAATAAGGTCTTTCCACCTCAC  441

seq1  CGGAAGCAAAGAACGATACACAGACAGACTGAAGTAATCCCGAGCCTAAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAAGCAAAGAACGATACACAGACAGACTGAAGTAATCCCGAGCCTAAA  491

seq1  GTGCCTGTGTGCAAAGTCTCCTATCACTGTGTAAAAGTCCAAAAGTCAAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTGTGTGCAAAGTCTCCTATCACTGTGTAAAAGTCCAAAAGTCAAC  541

seq1  AGTAAACATAGCTGATATAAGAAACCAGTATGGGAAACATCTAATCTTTA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAACATAGCTGATATAAGAAACCAGTATGGGAAACATCTAATCTTTA  591

seq1  AAAACAGAAACAACAAAACCCAATGAGAGCTTTCTATACAGGTTGTTTTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGAAACAACAAAACCCAATGAGAGCTTTCTATACAGGTTGTTTTT  641

seq1  CTGCGTGCCAGAGCTGCTCTCGATCTTTCAATGCTGCACAGAGCTGCTGC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCGTGCCAGAGCTGCTCTCGATCTTTCAATGCTGCACAGAGCTGCTGC  691

seq1  TCCAGGCCTACATCTTTACACTGCTGACGTGATTTACATCACTGCGGAAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGCCTACATCTTTACACTGCTGACGTGATTTACATCACTGCGGAAT  741

seq1  CAGTCTCTGGCTTGTAATCTGCACAGCACTGCTCATCCTAGAAACTGGCA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTCTGGCTTGTAATCTGCACAGCACTGCTCATCCTAGAAACTGGCA  791

seq1  TTCATTCAGCTACACCCCATATAGATCAGCAATAAGGGAGCATATAGGTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTCAGCTACACCCCATATAGATCAGCAATAAGGGAGCATATAGGTC  841

seq1  AAAACAAACATAACTGAAATGCTATCAATGGAATAACTCAATTATCAGTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAACATAACTGAAATGCTATCAATGGAATAACTCAATTATCAGTT  891

seq1  AATACATTGAATTCTTAACCATTTCAATGCTTACGTATTTGAAACTCAAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACATTGAATTCTTAACCATTTCAATGCTTACGTATTTGAAACTCAAA  941

seq1  GTAAGGGAGATATAAATTTGAACTTTAATGAACAAACAACAAAAAGAATT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGGAGATATAAATTTGAACTTTAATGAACAAACAACAAAAAGAATT  991

seq1  CTTTAGTTCGTGTGGACAGAACATTTTTCCACAAATAATCTTCATTTCAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGTTCGTGTGGACAGAACATTTTTCCACAAATAATCTTCATTTCAT  1041

seq1  TCTTGTATTCTCTTATTTGGAGCCACTGCAGCCTTATGTCTTAATATTTA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTATTCTCTTATTTGGAGCCACTGCAGCCTTATGTCTTAATATTTA  1091

seq1  GAAAGATGTATGGAATACAAGTAGATTCTAGTCATTCATTTATTTTCTTT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGATGTATGGAATACAAGTAGATTCTAGTCATTCATTTATTTTCTTT  1141

seq1  CTTGAGACAGGAATTC  1164
      ||||||||||||||||
seq2  CTTGAGACAGGAATTC  1157