BAC Information

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BAC

Clone NameB6Ng01-070G01
Chromosome2 (Build37)
Map Location 42,449,823 - 42,588,868
singlet/doubletdoublet
Overlap geneLrp1b
Upstream geneLOC625094
Downstream geneLOC100041228, LOC100041245, Kynu
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070G01.bB6Ng01-070G01.g
ACCDH888401DH888402
length1,0901,188
definitionDH888401|Mus musculus domesticus DNA, BAC clone: B6Ng01-070G01, 5' end.DH888402|Mus musculus domesticus DNA, BAC clone: B6Ng01-070G01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(42,449,823 - 42,450,922)(42,587,683 - 42,588,868)
sequence
gaattccaaggaagccacggttgcattgtgaaatcttgtgtcaagaagca
gaaagcaaaactatacaaaaaatgaaaagtttcaataccgtgtgctatga
gcgatttactctgctatagctaataatagactaatatttgtcatgcctca
taaaataacatcaatgagactacacttacgtatcaaaattatctaatgag
agttactagcatgaaccattaagaaatgaattataacctttctagaagta
gctaaacatatatgtctagatttaagaagtactggtgaaaatattcataa
aatttaaatatctaatgtgaagaactggacaaaaaatatatttcaaaaac
atataatgcaacctcagttatctttcagtaacttagggaatctttcagta
actaaaaccttctatgattgtgggtttgcttgccatgtcaaaatcagatg
tcccaaaaactgaacttaaaattttttccatgctttgttatgaaattaac
ttgactttgtgtgtgatggcttcatacactacatatttctattcattttt
acatcttctcatcttcttgcccagttatagagataaaaaaatcagatcct
tctgcatgctaagaaaaaaacactgtactacagacttatattttcagtgt
ctctcttgcttctatgcaaattatttagtaaatataacgtcaaaaataat
acattctaccagaaaactattggaaacaaaaattatatccttactacagt
tttgtgtctctttggtaatgacaaattaatcatcactcgtttagttttca
tcgccccttactcataaacatcttgtgatataacttattgccccatcatt
ttatttaaatttctcccctcaaagccagcagtcaagtatcaacatctaaa
cttagttacttttattgatcatctaaatctcacttttatgacctgtgtca
tcctgaatctttatttcctacctgcgggagtcaagtgtcttcttttgact
tctatcctggggtttcttgttacttcagccctaccatgtttctaattcta
aagttcctcaaattcttcaatttttctctaatgagaaaca
gaattctattctcgtagcatgttttctccaaactgcagcttctgtgcatt
tgccttgccttccttttataacatcagtctcctgagatcctgcaggagag
gaaggtaaatcaccagtcaatatttagacttggatattcctctgattaat
ggaagagccagggaatggtctccaaaggcacctggaacaatgccactggt
ttcttcagcgccacacaatcgaaatcttcataagctactttgacaccaac
tacagaagctttcgctacatggacccagcaactactcctaacttaagtgc
attgttagcactatttgctttaatactcattttcatatttttatattatt
tgagtttggatatttccaggtagggctagaaaacataagtattcaaatat
tgttatttattgtttgaaaaataataaaattacagtttgtctgaacacca
ttctaatcatttaaagacgtgcagctgatactcctagagaaacagattaa
aatttagattataacttacatagacatagaacatttgttttccttggata
aatgagatgattcatgagttggagagaagccaagagaaataaaaattttt
agcagaagataagcttataatataatgacacacttaagaagatttggttt
agttcctaaactaatttatgtagtcagatgccaatccaagagtagtgtaa
ttgcatcatattatcagtgtaatttacccacatttccttcatcctagtta
attttatattcactgtgcaaaacaatattctcagtattgttaattattga
aaacataattttacatcaagtcttctatgtggaattgacatgcaggttcc
ttagagtcagtggcggtttgaatgtgaaatgtctcctagaaactcagaca
tctgaatacttgacttcaagttggtggtactactgggatgcagctttgct
gggaatgggtatcactggggttatgccgctggagttcattgtcactccct
accttcatttccccttttggttcatccttgagttggagatatggagcata
ctaactttcttgacctgccttaatgtgtgtgttgcttacttaacaaggct
ttccaccaattggaaattatagggaggcagtatatcccaacgtttaacgt
atctagagtctttttatctaattatacaatggaataac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_42449823_42450922
seq2: B6Ng01-070G01.b_43_1132

seq1  GAATTCCAAGGAAGCCACGGTTGCATTGTGAAATCTTGTGTCAAGAAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGGAAGCCACGGTTGCATTGTGAAATCTTGTGTCAAGAAGCA  50

seq1  GAAAGCAAAACTATACAAAAAATGAAAAGTTTCAATACCGTGTGCTATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCAAAACTATACAAAAAATGAAAAGTTTCAATACCGTGTGCTATGA  100

seq1  GCGATTTACTCTGCTATAGCTAATAATAGACTAATATTTGTCATGCCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGATTTACTCTGCTATAGCTAATAATAGACTAATATTTGTCATGCCTCA  150

seq1  TAAAATAACATCAATGAGACTACACTTACGTATCAAAATTATCTAATGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAACATCAATGAGACTACACTTACGTATCAAAATTATCTAATGAG  200

seq1  AGTTACTAGCATGAACCATTAAGAAATGAATTATAACCTTTCTAGAAGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACTAGCATGAACCATTAAGAAATGAATTATAACCTTTCTAGAAGTA  250

seq1  GCTAAACATATATGTCTAGATTTAAGAAGTACTGGTGAAAATATTCATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAACATATATGTCTAGATTTAAGAAGTACTGGTGAAAATATTCATAA  300

seq1  AATTTAAATATCTAATGTGAAGAACTGGACAAAAAATATATTTCAAAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAAATATCTAATGTGAAGAACTGGACAAAAAATATATTTCAAAAAC  350

seq1  ATATAATGCAACCTCAGTTATCTTTCAGTAACTTAGGGAATCTTTCAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATGCAACCTCAGTTATCTTTCAGTAACTTAGGGAATCTTTCAGTA  400

seq1  ACTAAAACCTTCTATGATTGTGGGTTTGCTTGCCATGTCAAAATCAGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAACCTTCTATGATTGTGGGTTTGCTTGCCATGTCAAAATCAGATG  450

seq1  TCCCAAAAACTGAACTTAAAATTTTTTCCATGCTTTGTTATGAAATTAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAAAACTGAACTTAAAATTTTTTCCATGCTTTGTTATGAAATTAAC  500

seq1  TTGACTTTGTGTGTGATGGCTTCATACACTACATATTTCTATTCATTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTTTGTGTGTGATGGCTTCATACACTACATATTTCTATTCATTTTT  550

seq1  ACATCTTCTCATCTTCTTGCCCAGTTATAGAGATAAAAAAATCAGATCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTTCTCATCTTCTTGCCCAGTTATAGAGATAAAAAAATCAGATCCT  600

seq1  TCTGCATGCTAAGAAAAAAACACTGTACTACAGACTTATATTTTCAGTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCATGCTAAGAAAAAAACACTGTACTACAGACTTATATTTTCAGTGT  650

seq1  CTCTCTTGCTTCTATGCAAATTATTTAGTAAATATAACGTCAAAAATAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTTGCTTCTATGCAAATTATTTAGTAAATATAACGTCAAAAATAAT  700

seq1  ACATTCTACCAGAAAACTATTGGAAACAAAAATTATATCCTTACTACAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCTACCAGAAAACTATTGGAAACAAAAATTATATCCTTACTACAGT  750

seq1  TTTGTGTCTCTTTGGTAATGACAAATTAATCATCACTCGTTTAGTTTTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGTCTCTTTGGTAATGACAAATTAATCATCACTCGTTTAGTTTTCA  800

seq1  TCGCCCCTTACTCATAAACATCTTGTGATATAACTTATTGCCCCATCATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCCCCTTACTCATAAACATCTTGTGATATAACTTATTGCCCCATCATT  850

seq1  TTATTTAAATTTCTCCCCTCAAAGCCAGCAGTCAAGTATCAACATCTAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTAAATTTCTCCCCTCAAAGCCAGCAGTCAAGTATCAACATCTAAA  900

seq1  CTTAGTTACTTTTATTGATCATCTAAATCTCACTTTTAATGACCTGTGTC  950
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CTTAGTTACTTTTATTGATCATCTAAATCTCACTTTT-ATGACCTGTGTC  949

seq1  ATCCTGAATCTTTATTTCCTACCTGCGGGAGTCAAAGTTGTCCTTCTTTT  1000
      |||||||||||||||||||||||||||||||||||   ||| ||||||||
seq2  ATCCTGAATCTTTATTTCCTACCTGCGGGAGTCAA--GTGT-CTTCTTTT  996

seq1  GACTTCTATCCTGGGTTTTCTTGTTTACTTTCAGCCCTACCATGTTTCTA  1050
      ||||||||||||||| ||||||| |||| |||||||||||||||||||||
seq2  GACTTCTATCCTGGGGTTTCTTG-TTAC-TTCAGCCCTACCATGTTTCTA  1044

seq1  ATTCTAAAAGTTCCATCAAATTCTCTCATTTTTCTCCATATGAAGAAACA  1100
      ||||| |||||||| |||||||||   ||||||||| | ||| |||||||
seq2  ATTCT-AAAGTTCC-TCAAATTCTTCAATTTTTCTCTA-ATG-AGAAACA  1090

seq1: chr2_42587683_42588868
seq2: B6Ng01-070G01.g_64_1251 (reverse)

seq1  GTTATTCCATTGTAT-ATTAGAATAAAAAGATCCCTAG-TACGTTAGACG  48
      ||||||||||||||| ||||| ||||||||| | |||| ||||||| |||
seq2  GTTATTCCATTGTATAATTAG-ATAAAAAGA-CTCTAGATACGTTAAACG  48

seq1  TTTGGGTATACTGGCTTCCTTATAATTT-CATATGGTGGGAAAGCATGTT  97
      || || |||||| || ||| |||||||| ||  |||||| ||  | ||||
seq2  TTGGGATATACT-GCCTCCCTATAATTTCCAATTGGTGGAAAGCCTTGTT  97

seq1  -AGTAAGCAACACACA-TTTAAGCCAGGTC-AGGAAGTTAGTATTGCT-C  143
       |||||||||||||||  ||||| |||||| || ||||||||| |||| |
seq2  AAGTAAGCAACACACACATTAAGGCAGGTCAAGAAAGTTAGTA-TGCTCC  146

seq1  ATATCCTCAACTTCAAGGATGAACCAAAAGGGGAAATGAAGGTAGGGAGT  193
      |||||  |||| ||||||||||||||||||||||||||||||||||||||
seq2  ATATCTCCAAC-TCAAGGATGAACCAAAAGGGGAAATGAAGGTAGGGAGT  195

seq1  GACAATGAACTCCAGCGGCATAACCCCAGTGATACCCATTCCCAGCAAAG  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATGAACTCCAGCGGCATAACCCCAGTGATACCCATTCCCAGCAAAG  245

seq1  CTGCATCCCAGTAGTACCACCAACTTGAAGTCAAGTATTCAGATGTCTGA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATCCCAGTAGTACCACCAACTTGAAGTCAAGTATTCAGATGTCTGA  295

seq1  GTTTCTAGGAGACATTTCACATTCAAACCGCCACTGACTCTAAGGAACCT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTAGGAGACATTTCACATTCAAACCGCCACTGACTCTAAGGAACCT  345

seq1  GCATGTCAATTCCACATAGAAGACTTGATGTAAAATTATGTTTTCAATAA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTCAATTCCACATAGAAGACTTGATGTAAAATTATGTTTTCAATAA  395

seq1  TTAACAATACTGAGAATATTGTTTTGCACAGTGAATATAAAATTAACTAG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAATACTGAGAATATTGTTTTGCACAGTGAATATAAAATTAACTAG  445

seq1  GATGAAGGAAATGTGGGTAAATTACACTGATAATATGATGCAATTACACT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAGGAAATGTGGGTAAATTACACTGATAATATGATGCAATTACACT  495

seq1  ACTCTTGGATTGGCATCTGACTACATAAATTAGTTTAGGAACTAAACCAA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTGGATTGGCATCTGACTACATAAATTAGTTTAGGAACTAAACCAA  545

seq1  ATCTTCTTAAGTGTGTCATTATATTATAAGCTTATCTTCTGCTAAAAATT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCTTAAGTGTGTCATTATATTATAAGCTTATCTTCTGCTAAAAATT  595

seq1  TTTATTTCTCTTGGCTTCTCTCCAACTCATGAATCATCTCATTTATCCAA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTCTCTTGGCTTCTCTCCAACTCATGAATCATCTCATTTATCCAA  645

seq1  GGAAAACAAATGTTCTATGTCTATGTAAGTTATAATCTAAATTTTAATCT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAACAAATGTTCTATGTCTATGTAAGTTATAATCTAAATTTTAATCT  695

seq1  GTTTCTCTAGGAGTATCAGCTGCACGTCTTTAAATGATTAGAATGGTGTT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTCTAGGAGTATCAGCTGCACGTCTTTAAATGATTAGAATGGTGTT  745

seq1  CAGACAAACTGTAATTTTATTATTTTTCAAACAATAAATAACAATATTTG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAAACTGTAATTTTATTATTTTTCAAACAATAAATAACAATATTTG  795

seq1  AATACTTATGTTTTCTAGCCCTACCTGGAAATATCCAAACTCAAATAATA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTTATGTTTTCTAGCCCTACCTGGAAATATCCAAACTCAAATAATA  845

seq1  TAAAAATATGAAAATGAGTATTAAAGCAAATAGTGCTAACAATGCACTTA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATATGAAAATGAGTATTAAAGCAAATAGTGCTAACAATGCACTTA  895

seq1  AGTTAGGAGTAGTTGCTGGGTCCATGTAGCGAAAGCTTCTGTAGTTGGTG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGGAGTAGTTGCTGGGTCCATGTAGCGAAAGCTTCTGTAGTTGGTG  945

seq1  TCAAAGTAGCTTATGAAGATTTCGATTGTGTGGCGCTGAAGAAACCAGTG  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGTAGCTTATGAAGATTTCGATTGTGTGGCGCTGAAGAAACCAGTG  995

seq1  GCATTGTTCCAGGTGCCTTTGGAGACCATTCCCTGGCTCTTCCATTAATC  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGTTCCAGGTGCCTTTGGAGACCATTCCCTGGCTCTTCCATTAATC  1045

seq1  AGAGGAATATCCAAGTCTAAATATTGACTGGTGATTTACCTTCCTCTCCT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAATATCCAAGTCTAAATATTGACTGGTGATTTACCTTCCTCTCCT  1095

seq1  GCAGGATCTCAGGAGACTGATGTTATAAAAGGAAGGCAAGGCAAATGCAC  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGATCTCAGGAGACTGATGTTATAAAAGGAAGGCAAGGCAAATGCAC  1145

seq1  AGAAGCTGCAGTTTGGAGAAAACATGCTACGAGAATAGAATTC  1186
      |||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCTGCAGTTTGGAGAAAACATGCTACGAGAATAGAATTC  1188