BAC Information

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BAC

Clone NameB6Ng01-070J15
Chromosome2 (Build37)
Map Location 60,438,330 - 60,582,062
singlet/doubletdoublet
Overlap geneItgb6
Upstream geneLOC100039016, Tanc1, Wdsub1, Baz2b, LOC667103, LOC667106, Ldha-ps, LOC100039092, March7, Cd302, LOC625861, Ly75, LOC100039176, Pla2r1
Downstream geneRbms1, ENSMUSG00000075325, Tank, Psmd14
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070J15.bB6Ng01-070J15.g
ACCDH888558DH888559
length1,0271,117
definitionDH888558|Mus musculus domesticus DNA, BAC clone: B6Ng01-070J15, 5' end.DH888559|Mus musculus domesticus DNA, BAC clone: B6Ng01-070J15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,438,330 - 60,439,360)(60,580,927 - 60,582,062)
sequence
gaattcatctctttgcttgggatattcttttcttgattgtttccaatcag
cgaacaatgtctcaccttcatgccctgaatgactggttgttgaatgacct
gttattatcttaagtcgacctccttttgaagcgacaaagcatgataaacc
atacagtgcagtaaacctttaacgcaagcggagttgactttctctggccg
aaggaggtctgtctacccatctgaggaaaggcctgctttgtgcttctccc
tgtgcttgtaggtcacgttcttaaaagtgctggtggaacctcggtacaga
ggattggttccctaaagaacagtagggggaaaaaacggttcaaagaaaag
atgcattttgttagtacaccatttccacatcttcaaatatttgtgttata
gttcaaatgggagagcaaagctctatcttggaagctatttgaatttattt
tgataaattttaaattttatccacctttatctcatttatgttgttatttc
atgttatatgcgtatgcacatctctgaaattattatttttaattttatta
caccaatttgtgtagcagaagggcacttgtgtgctactgtgtgcctgtgt
agggtaccttgggagccagctttgactttctactttgaggtccgaagaat
caaactgagttcagcaggtttgaccacaatgtctgttaccctctgactca
ccctcgctggccctctaccttatgttctgagtctctcagttaacagggat
ggggctggcatgaggccagggtagagcccatcagtttggttagacttggc
tgggtagcattccagggctatttgtaggtttgtgggaggaggacccacac
acctgcctcctacactggagggggtgggggaggacccctccaatttgact
agactggctggctagcagtcttcaaagctgtttaagggaggagtagctac
acactcatgttctccacccttcctgtattctgtgaaaagccccataaact
ttgcagtctcagatgaacatggtagaa
gaattcactttccttcatgtttatatttctgacaagcagaaacctggtat
ccctggttaacttgtccattcgatcagtcctcctctaactagttagtctc
ccatcttggttacttcccaagttacaagtttcagtctggattcttcaggc
tccatctcctcccactgtggggtcagtctggcaaggaagtggccctgtat
cacccagagcaggcagctatgaggggctctaccatacagtgtcacatgag
tgccctctggattaagctggtcccctgaaatctcctcatcgctgtcctgt
gacacatggcaaaggttgggacagctaatgagcaggaaaggtaactggga
aactgagaggaaatggaaagtaagaataggagcacaaaggagagagagag
aacggaacaaaatggtgggtggttctaaggggcctgccagactggaaagt
gtaagaaaaatagaggagggagagaagatacactgagcagtcaattccct
cagctcccagagctgtgacctagcaaacaaactgctttggtggctaagtt
ccattaaaggagctgtcgtgtttctaagataccaacaaggagctgccatt
ttggacatcataaagccaagtcccacactgatcttcagagagacctgaac
ctcccagttctccagaaccagcttcatggcacttggggacatggcccgcc
agttaaaccacttgattaaacattattttttttttaatattgcagtttgt
ggtagttaaaatatgcttgacccagggagtggcattattaggaggtgtgg
acttgttggaggaagtgtgtcactgtgggcatgcgctttaaacccttctc
ctagctgcctagaagccagtcttctagtggacttcagatgaagacataga
actcccagctcctcttgcaccgtgtctgcctggatgtgccatgctcccac
cttgatgaaaatggactgaactctgaactgtagcagcccaataaatatgt
cctataagacttgcttggtcatggtgtctttcaagcagcaaccctaacta
gaacaaggttttagattttaattgtactcattactggagagagggcaaga
gataaaacgatctgaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_60438330_60439360
seq2: B6Ng01-070J15.b_44_1070

seq1  GAATTCATCTCTTTGCTTGGGATATTCTTTTCTTGATTGTTTCCAATCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTCTTTGCTTGGGATATTCTTTTCTTGATTGTTTCCAATCAG  50

seq1  CGAACAATGTCTCACCTTCATGCCCTGAATGACTGGTTGTTGAATGACCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAACAATGTCTCACCTTCATGCCCTGAATGACTGGTTGTTGAATGACCT  100

seq1  GTTATTATCTTAAGTCGACCTCCTTTTGAAGCGACAAAGCATGATAAACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTATCTTAAGTCGACCTCCTTTTGAAGCGACAAAGCATGATAAACC  150

seq1  ATACAGTGCAGTAAACCTTTAACGCAAGCGGAGTTGACTTTCTCTGGCCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGTGCAGTAAACCTTTAACGCAAGCGGAGTTGACTTTCTCTGGCCG  200

seq1  AAGGAGGTCTGTCTACCCATCTGAGGAAAGGCCTGCTTTGTGCTTCTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGGTCTGTCTACCCATCTGAGGAAAGGCCTGCTTTGTGCTTCTCCC  250

seq1  TGTGCTTGTAGGTCACGTTCTTAAAAGTGCTGGTGGAACCTCGGTACAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTTGTAGGTCACGTTCTTAAAAGTGCTGGTGGAACCTCGGTACAGA  300

seq1  GGATTGGTTCCCTAAAGAACAGTAGGGGGAAAAAACGGTTCAAAGAAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGGTTCCCTAAAGAACAGTAGGGGGAAAAAACGGTTCAAAGAAAAG  350

seq1  ATGCATTTTGTTAGTACACCATTTCCACATCTTCAAATATTTGTGTTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATTTTGTTAGTACACCATTTCCACATCTTCAAATATTTGTGTTATA  400

seq1  GTTCAAATGGGAGAGCAAAGCTCTATCTTGGAAGCTATTTGAATTTATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAAATGGGAGAGCAAAGCTCTATCTTGGAAGCTATTTGAATTTATTT  450

seq1  TGATAAATTTTAAATTTTATCCACCTTTATCTCATTTATGTTGTTATTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAATTTTAAATTTTATCCACCTTTATCTCATTTATGTTGTTATTTC  500

seq1  ATGTTATATGCGTATGCACATCTCTGAAATTATTATTTTTAATTTTATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTATATGCGTATGCACATCTCTGAAATTATTATTTTTAATTTTATTA  550

seq1  CACCAATTTGTGTAGCAGAAGGGCACTTGTGTGCTACTGTGTGCCTGTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAATTTGTGTAGCAGAAGGGCACTTGTGTGCTACTGTGTGCCTGTGT  600

seq1  AGGGTACCTTGGGAGCCAGCTTTGACTTTCTACTTTGAGGTCCGAAGAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTACCTTGGGAGCCAGCTTTGACTTTCTACTTTGAGGTCCGAAGAAT  650

seq1  CAAACTGAGTTCAGCAGGTTTGACCACAATGTCTGTTACCCTCTGACTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTGAGTTCAGCAGGTTTGACCACAATGTCTGTTACCCTCTGACTCA  700

seq1  CCCTCGCTGGCCCTCTACCTTATGTTCTGAGTCTCTCAGTTAACAGGGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCGCTGGCCCTCTACCTTATGTTCTGAGTCTCTCAGTTAACAGGGAT  750

seq1  GGGGCTGGCATGAGGCCAGGGTAGAGCCCATCAGTTTGGTTAGACTTGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTGGCATGAGGCCAGGGTAGAGCCCATCAGTTTGGTTAGACTTGGC  800

seq1  TGGGTAGCATTCCAGGGCTATTTGTAGGTTTGTGGGAGGAGGACCCACAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTAGCATTCCAGGGCTATTTGTAGGTTTGTGGGAGGAGGACCCACAC  850

seq1  ACCTGCCTCCTACACTGGA-GGGGTGGGGGAGGACCCCTCCAATTTGACT  899
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ACCTGCCTCCTACACTGGAGGGGGTGGGGGAGGACCCCTCCAATTTGACT  900

seq1  AGACTGGCTGGCTAGCAGTCTCCAAAGCTGTTTATGGGAGGAGTAGCTAC  949
      ||||||||||||||||||||| |||||||||||| |||||||||||||||
seq2  AGACTGGCTGGCTAGCAGTCTTCAAAGCTGTTTAAGGGAGGAGTAGCTAC  950

seq1  ACACTCATGGTCATCCACCC-TCCTGTATTCTGTGAAGAAGCCCAATAAA  998
      ||||||||| || ||||||| |||||||||||||||| |||||| |||||
seq2  ACACTCATGTTC-TCCACCCTTCCTGTATTCTGTGAA-AAGCCCCATAAA  998

seq1  CTTTGCAGTTCTCCAGAATGAACATTGGTAGAA  1031
      |||||||| ||| ||| ||||||| ||||||||
seq2  CTTTGCAG-TCT-CAG-ATGAACA-TGGTAGAA  1027

seq1: chr2_60580927_60582062
seq2: B6Ng01-070J15.g_67_1183 (reverse)

seq1  TCTCAAGATCGGTTTTTACTCTTGCCCTCTCT-CAGTTTAATGAGGTACA  49
      |||| ||||| |||||  |||||||||||||| |||  |||||| |||||
seq2  TCTC-AGATC-GTTTTATCTCTTGCCCTCTCTCCAG--TAATGA-GTACA  45

seq1  ATTAAAATCTAAAAACTGTGTCTTAGTTAGGGTTTTGCTGCTGTGAAAAG  99
      |||||||||||||| || |||  |||||||||  |||||||| || ||||
seq2  ATTAAAATCTAAAACCT-TGTTCTAGTTAGGG--TTGCTGCT-TG-AAAG  90

seq1  ACACCATGACCAAGGCAAGTCTTATAGGGACAATATTTAATTGGGGCTGG  149
      ||||||||||||| |||||||||||| |||| |||||||  | |||||| 
seq2  ACACCATGACCAA-GCAAGTCTTATA-GGAC-ATATTTA--TTGGGCTG-  134

seq1  CTTACAGGTTCAGAGGTTCAGTCCATTTTCATCAAGGTGGGAGCATGGCA  199
        |||| ||||||| |||||||||||||||||||||||||||||||||| 
seq2  -CTACA-GTTCAGA-GTTCAGTCCATTTTCATCAAGGTGGGAGCATGGC-  180

seq1  ACATCCAGGCAGACACGGTGCAAGAGGAGCTGGGAGTTCTATGTCTTCAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCAGGCAGACACGGTGCAAGAGGAGCTGGGAGTTCTATGTCTTCAT  230

seq1  CTGAAGTCCACTAGAAGACTGGCTTCTAGGCAGCTAGGAGAAGGGTTTAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGTCCACTAGAAGACTGGCTTCTAGGCAGCTAGGAGAAGGGTTTAA  280

seq1  AGCGCATGCCCACAGTGACACACTTCCTCCAACAAGTCCACACCTCCTAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGCATGCCCACAGTGACACACTTCCTCCAACAAGTCCACACCTCCTAA  330

seq1  TAATGCCACTCCCTGGGTCAAGCATATTTTAACTACCACAAACTGCAATA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCCACTCCCTGGGTCAAGCATATTTTAACTACCACAAACTGCAATA  380

seq1  TTAAAAAAAAAATAATGTTTAATCAAGTGGTTTAACTGGCGGGCCATGTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAAAAAATAATGTTTAATCAAGTGGTTTAACTGGCGGGCCATGTC  430

seq1  CCCAAGTGCCATGAAGCTGGTTCTGGAGAACTGGGAGGTTCAGGTCTCTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGTGCCATGAAGCTGGTTCTGGAGAACTGGGAGGTTCAGGTCTCTC  480

seq1  TGAAGATCAGTGTGGGACTTGGCTTTATGATGTCCAAAATGGCAGCTCCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGATCAGTGTGGGACTTGGCTTTATGATGTCCAAAATGGCAGCTCCT  530

seq1  TGTTGGTATCTTAGAAACACGACAGCTCCTTTAATGGAACTTAGCCACCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGTATCTTAGAAACACGACAGCTCCTTTAATGGAACTTAGCCACCA  580

seq1  AAGCAGTTTGTTTGCTAGGTCACAGCTCTGGGAGCTGAGGGAATTGACTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGTTTGTTTGCTAGGTCACAGCTCTGGGAGCTGAGGGAATTGACTG  630

seq1  CTCAGTGTATCTTCTCTCCCTCCTCTATTTTTCTTACACTTTCCAGTCTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTGTATCTTCTCTCCCTCCTCTATTTTTCTTACACTTTCCAGTCTG  680

seq1  GCAGGCCCCTTAGAACCACCCACCATTTTGTTCCGTTCTCTCTCTCTCCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCCCCTTAGAACCACCCACCATTTTGTTCCGTTCTCTCTCTCTCCT  730

seq1  TTGTGCTCCTATTCTTACTTTCCATTTCCTCTCAGTTTCCCAGTTACCTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCTCCTATTCTTACTTTCCATTTCCTCTCAGTTTCCCAGTTACCTT  780

seq1  TCCTGCTCATTAGCTGTCCCAACCTTTGCCATGTGTCACAGGACAGCGAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCTCATTAGCTGTCCCAACCTTTGCCATGTGTCACAGGACAGCGAT  830

seq1  GAGGAGATTTCAGGGGACCAGCTTAATCCAGAGGGCACTCATGTGACACT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGATTTCAGGGGACCAGCTTAATCCAGAGGGCACTCATGTGACACT  880

seq1  GTATGGTAGAGCCCCTCATAGCTGCCTGCTCTGGGTGATACAGGGCCACT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGGTAGAGCCCCTCATAGCTGCCTGCTCTGGGTGATACAGGGCCACT  930

seq1  TCCTTGCCAGACTGACCCCACAGTGGGAGGAGATGGAGCCTGAAGAATCC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGCCAGACTGACCCCACAGTGGGAGGAGATGGAGCCTGAAGAATCC  980

seq1  AGACTGAAACTTGTAACTTGGGAAGTAACCAAGATGGGAGACTAACTAGT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGAAACTTGTAACTTGGGAAGTAACCAAGATGGGAGACTAACTAGT  1030

seq1  TAGAGGAGGACTGATCGAATGGACAAGTTAACCAGGGATACCAGGTTTCT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGAGGACTGATCGAATGGACAAGTTAACCAGGGATACCAGGTTTCT  1080

seq1  GCTTGTCAGAAATATAAACATGAAGGAAAGTGAATTC  1136
      |||||||||||||||||||||||||||||||||||||
seq2  GCTTGTCAGAAATATAAACATGAAGGAAAGTGAATTC  1117