BAC Information

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BAC

Clone NameB6Ng01-070K23
Chromosome2 (Build37)
Map Location 141,077,679 - 141,165,547
singlet/doubletdoublet
Overlap genenone
Upstream geneSel1l2, 2900006F19Rik, Flrt3
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070K23.bB6Ng01-070K23.g
ACCDH888614DH888615
length1,2051,117
definitionDH888614|Mus musculus domesticus DNA, BAC clone: B6Ng01-070K23, 5' end.DH888615|Mus musculus domesticus DNA, BAC clone: B6Ng01-070K23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(141,077,679 - 141,078,894)(141,164,428 - 141,165,547)
sequence
gaattcatgagtaatctttgttgttgctgctatgattgctcatttcccat
tatttttactactttcatttttggttttactaaatatgataatgaatttt
tttattgaatatggataacatttatcgaaactcttgatctaccaggtttc
catcctctccttccaacatagcaggtgaaaactgagagtcagaaattaga
tagtcttgtagtatctggaggagaaggtttaaaaatatcctgagatagaa
aaggaaatcccatagtcccaggagacatggactagtgccatagcacagcg
acttgcactaaatagagtctctgctgcccaacaaataaatatttccattt
gttctgtctcatatgttcttgaaatacctattgaaaattttctatgtctc
taatcacttgcatgcaggctttgcttacatgctcctgtgacagattagaa
tataatagacatgtgaggaagacactggtccactaaactccatggaccaa
atgcagaaactaagaaaggttatgtggtacctgaaattctaacagtttca
agggtactccatgaaaacaagagtagagaagtgcaaatttaaaaatggtc
cctcccttccaaagcaaacaaagggtctataaacttcaaccaggctactg
accaatacacctagtgctggcactttatgacctgtggtcaggatccaaaa
agagaaatgagtgggagacataggctctcaggaccataaagtcccccaaa
ccttgagataagggaacatgttctgcgaatagaatgaataagccctcttc
tgcatccctggtggtgagaagggcatggagaaaaacagatcagactttac
tatgtggcagtcaatgtcagccaggaggaaaatgtagagagtgttatttt
gtagaatgtagagctactaaggaaatcattaagtaaggatgatgctaggt
taaataaattagcaatacaaagcatgcagtgtggaaagaggtgaagaggg
aattgggtgcatgagacaggcactgcagcagatggggagcatagagaagg
actccacaaggcaggagctagcagcagcgggtgggatggagctagaatgg
ggatggggtagtacctgatgcagtatagattgggtggaagggaaggtcct
agtgatgtccagtactgctcctttggatctctgaaacccctttttttcct
cacta
gaattcatttgaaatgaaacttaaaaacccaaacaaatatgatcaacaac
taggtatattagaggcctactaaaaaaacagatgtcattttcaaactgag
taatttgaaatgtttattagtgtgactactggcaaaaatataggggaata
actgacaccagaatggtgacattcttcaaggatagcaggaggggcactat
actattcacaagtcaaaagcatgaaagaagaaaacacatttccttgtgct
tctttgtactttttgacaaatgcccattggccaaatcaagagatgcaaga
agccctgatatgatatttcatattgaccagattatgaaagcaaatagaag
aagaaggaggtgaagagtagggggatatatgctttacagacatactcatt
agctcagggtcagaagagtgttagggcagaaaatagggacaatggcagtt
gtggcatttcagatttcaaaactgtaaaactgtgatggaataaagatagt
gataactgggtctctgatatttttgttcctgctatggagttccaaatgtt
tacaattccctgagtgataagcataagagaacgaacccttgttacttgtt
gtaagccttgaactattctggaggttatcataatgcagtaactctggacc
cagacacagcttcaagatagttgcctagagacctgatcatgcaattaggg
agtgaagacttgcagtctactcagtttctccaagagaaataggaggttgg
ggactgagtttaaaagcaaattattcagtctgtcatgcctattgatggat
aacttcataaaaacctaaagaagagttgaaacaatgatagttgggtggag
ggtagggcagcagccggagagagggggtgtcatgcttttctcatctttcc
tattctatgtaatacttttggttttaaatcccaagtcatgtcctttatat
aaatacttcaggttaagtaaaatactgtcaggcaatctgggcacattcta
gaaagtcatcaggagccaaggatgttcatggagaagtcattgggttgaca
ggttagtcaggacttacaggaggagtgatttatcattggaaatctaataa
agggaggcaaggtcagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_141077679_141078894
seq2: B6Ng01-070K23.b_45_1249

seq1  GAATTCATGAGTAATCTTTGTTGTTGCTGCTATGATTGCTCATTTCCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGAGTAATCTTTGTTGTTGCTGCTATGATTGCTCATTTCCCAT  50

seq1  TATTTTTACTACTTTCATTTTTGGTTTTACTAAATATGATAATGAATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTACTACTTTCATTTTTGGTTTTACTAAATATGATAATGAATTTT  100

seq1  TTTATTGAATATGGATAACATTTATCGAAACTCTTGATCTACCAGGTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTGAATATGGATAACATTTATCGAAACTCTTGATCTACCAGGTTTC  150

seq1  CATCCTCTCCTTCCAACATAGCAGGTGAAAACTGAGAGTCAGAAATTAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTCTCCTTCCAACATAGCAGGTGAAAACTGAGAGTCAGAAATTAGA  200

seq1  TAGTCTTGTAGTATCTGGAGGAGAAGGTTTAAAAATATCCTGAGATAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTTGTAGTATCTGGAGGAGAAGGTTTAAAAATATCCTGAGATAGAA  250

seq1  AAGGAAATCCCATAGTCCCAGGAGACATGGACTAGTGCCATAGCACAGCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAATCCCATAGTCCCAGGAGACATGGACTAGTGCCATAGCACAGCG  300

seq1  ACTTGCACTAAATAGAGTCTCTGCTGCCCAACAAATAAATATTTCCATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCACTAAATAGAGTCTCTGCTGCCCAACAAATAAATATTTCCATTT  350

seq1  GTTCTGTCTCATATGTTCTTGAAATACCTATTGAAAATTTTCTATGTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGTCTCATATGTTCTTGAAATACCTATTGAAAATTTTCTATGTCTC  400

seq1  TAATCACTTGCATGCAGGCTTTGCTTACATGCTCCTGTGACAGATTAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCACTTGCATGCAGGCTTTGCTTACATGCTCCTGTGACAGATTAGAA  450

seq1  TATAATAGACATGTGAGGAAGACACTGGTCCACTAAACTCCATGGACCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATAGACATGTGAGGAAGACACTGGTCCACTAAACTCCATGGACCAA  500

seq1  ATGCAGAAACTAAGAAAGGTTATGTGGTACCTGAAATTCTAACAGTTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGAAACTAAGAAAGGTTATGTGGTACCTGAAATTCTAACAGTTTCA  550

seq1  AGGGTACTCCATGAAAACAAGAGTAGAGAAGTGCAAATTTAAAAATGGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTACTCCATGAAAACAAGAGTAGAGAAGTGCAAATTTAAAAATGGTC  600

seq1  CCTCCCTTCCAAAGCAAACAAAGGGTCTATAAACTTCAACCAGGCTACTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCTTCCAAAGCAAACAAAGGGTCTATAAACTTCAACCAGGCTACTG  650

seq1  ACCAATACACCTAGTGCTGGCACTTTATGACCTGTGGTCAGGATCCAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATACACCTAGTGCTGGCACTTTATGACCTGTGGTCAGGATCCAAAA  700

seq1  AGAGAAATGAGTGGGAGACATAGGCTCTCAGGACCATAAAGTCCCCCAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAATGAGTGGGAGACATAGGCTCTCAGGACCATAAAGTCCCCCAAA  750

seq1  CCTTGAGATAAGGGAACATGTTCTGCGAATAGAATGAATAAGCCCTCTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGAGATAAGGGAACATGTTCTGCGAATAGAATGAATAAGCCCTCTTC  800

seq1  TGCATCCCTGGTGGTGAGAAGGGCATGGAGAAAAACAGATCAGACTTTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCCCTGGTGGTGAGAAGGGCATGGAGAAAAACAGATCAGACTTTAC  850

seq1  TATGTGGCAGTCAATGTCAGCCAGGAGGAAAATGTAGAGAGTGTTATTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGGCAGTCAATGTCAGCCAGGAGGAAAATGTAGAGAGTGTTATTTT  900

seq1  GTAGAATGTAGAGCTACTAAGGAAATCATTAAGTAAGGAATGATGCTAGG  950
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GTAGAATGTAGAGCTACTAAGGAAATCATTAAGTAAGG-ATGATGCTAGG  949

seq1  TTAAATAAATTAGCAATACAAAGCATGCAGTGTGGAAAGAGGTGAAGAGG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATAAATTAGCAATACAAAGCATGCAGTGTGGAAAGAGGTGAAGAGG  999

seq1  GAATTGGGTGCATGAAGACCAGGCACTGCAGCAGGATGGGGAGCATAGAG  1050
      |||||||||||||| ||| |||||||||||||| ||||||||||||||||
seq2  GAATTGGGTGCATG-AGA-CAGGCACTGCAGCA-GATGGGGAGCATAGAG  1046

seq1  AAGGACTCCACCAAGGCAAGGAGCTAGCAGCAGC-GGTGGGAT-GAGCTA  1098
      |||||||||| |||||| |||||||||||||||| |||||||| ||||||
seq2  AAGGACTCCA-CAAGGC-AGGAGCTAGCAGCAGCGGGTGGGATGGAGCTA  1094

seq1  GA--TGGGATGGGGTAGTACCTGATGCAGGTATTAGA-TGGGTGGAAGGA  1145
      ||   ||||||||||||||||||||||| ||| |||| ||||||||||  
seq2  GAATGGGGATGGGGTAGTACCTGATGCA-GTA-TAGATTGGGTGGAAG--  1140

seq1  GAAAGGTCATAAAGGTAGTTTCAGTACTGCTTCATTTGGATCTCTGAAAA  1195
      | |||||| |  ||  |  | ||||||||| || |||||||||||| |||
seq2  GGAAGGTCCT--AGTGATGTCCAGTACTGC-TCCTTTGGATCTCTG-AAA  1186

seq1  CCCCTTTTTTTTCCTTCACTA  1216
      |||||||||||  | ||||||
seq2  CCCCTTTTTTT--CCTCACTA  1205

seq1: chr2_141164428_141165547
seq2: B6Ng01-070K23.g_68_1184 (reverse)

seq1  CCTGACCTTGACTTTTGCCTCCTTTATTAGATTT-CAATGATAAATCTAT  49
      |||||||||| ||       |||||||||||||| |||||||||||| | 
seq2  CCTGACCTTGCCT------CCCTTTATTAGATTTCCAATGATAAATC-AC  43

seq1  TTCTTCTGTATGT-CTGACTAACTTGTCAA-CCAATGGCTTCT-CATG-A  95
      | || ||||| || ||||||||| |||||| |||||| ||||| |||| |
seq2  TCCTCCTGTAAGTCCTGACTAACCTGTCAACCCAATGACTTCTCCATGAA  93

seq1  CATCCTTGGCT-CTGATGACTTTCTAGAATGTTGCCCAGATTGCCTGACA  144
      ||||||||||| ||||||||||||||||||| ||||||||||||||||||
seq2  CATCCTTGGCTCCTGATGACTTTCTAGAATG-TGCCCAGATTGCCTGACA  142

seq1  GTATTTTACTTAACCTGAAGTATTTATTATAAAGGACATGACTTGGGATT  194
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GTATTTTACTTAACCTGAAGTATTTA-TATAAAGGACATGACTTGGGATT  191

seq1  TAAAAACCAAAAGTATTACATAGAATAGGAAAGATGAGAAAAGCATGACA  244
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  T-AAAACCAAAAGTATTACATAGAATAGGAAAGATGAGAAAAGCATGACA  240

seq1  CCCCCTCTCTCCGGCTGCTGCCCTACCTTCCA-CCAACTATCATTGTTTC  293
      ||||||||||||||||||||||||||| |||| |||||||||||||||||
seq2  CCCCCTCTCTCCGGCTGCTGCCCTACCCTCCACCCAACTATCATTGTTTC  290

seq1  AACTCTTCTTTAGGTTTTTATGAAGTTATCCATCAATAGGCATGACAGAC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTTCTTTAGGTTTTTATGAAGTTATCCATCAATAGGCATGACAGAC  340

seq1  TGAATAATTTGCTTTTAAACTCAGTCCCCAACCTCCTATTTCTCTTGGAG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAATTTGCTTTTAAACTCAGTCCCCAACCTCCTATTTCTCTTGGAG  390

seq1  AAACTGAGTAGACTGCAAGTCTTCACTCCCTAATTGCATGATCAGGTCTC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGAGTAGACTGCAAGTCTTCACTCCCTAATTGCATGATCAGGTCTC  440

seq1  TAGGCAACTATCTTGAAGCTGTGTCTGGGTCCAGAGTTACTGCATTATGA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCAACTATCTTGAAGCTGTGTCTGGGTCCAGAGTTACTGCATTATGA  490

seq1  TAACCTCCAGAATAGTTCAAGGCTTACAACAAGTAACAAGGGTTCGTTCT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTCCAGAATAGTTCAAGGCTTACAACAAGTAACAAGGGTTCGTTCT  540

seq1  CTTATGCTTATCACTCAGGGAATTGTAAACATTTGGAACTCCATAGCAGG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGCTTATCACTCAGGGAATTGTAAACATTTGGAACTCCATAGCAGG  590

seq1  AACAAAAATATCAGAGACCCAGTTATCACTATCTTTATTCCATCACAGTT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAATATCAGAGACCCAGTTATCACTATCTTTATTCCATCACAGTT  640

seq1  TTACAGTTTTGAAATCTGAAATGCCACAACTGCCATTGTCCCTATTTTCT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGTTTTGAAATCTGAAATGCCACAACTGCCATTGTCCCTATTTTCT  690

seq1  GCCCTAACACTCTTCTGACCCTGAGCTAATGAGTATGTCTGTAAAGCATA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTAACACTCTTCTGACCCTGAGCTAATGAGTATGTCTGTAAAGCATA  740

seq1  TATCCCCCTACTCTTCACCTCCTTCTTCTTCTATTTGCTTTCATAATCTG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCCCTACTCTTCACCTCCTTCTTCTTCTATTTGCTTTCATAATCTG  790

seq1  GTCAATATGAAATATCATATCAGGGCTTCTTGCATCTCTTGATTTGGCCA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATATGAAATATCATATCAGGGCTTCTTGCATCTCTTGATTTGGCCA  840

seq1  ATGGGCATTTGTCAAAAAGTACAAAGAAGCACAAGGAAATGTGTTTTCTT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCATTTGTCAAAAAGTACAAAGAAGCACAAGGAAATGTGTTTTCTT  890

seq1  CTTTCATGCTTTTGACTTGTGAATAGTATAGTGCCCCTCCTGCTATCCTT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCATGCTTTTGACTTGTGAATAGTATAGTGCCCCTCCTGCTATCCTT  940

seq1  GAAGAATGTCACCATTCTGGTGTCAGTTATTCCCCTATATTTTTGCCAGT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATGTCACCATTCTGGTGTCAGTTATTCCCCTATATTTTTGCCAGT  990

seq1  AGTCACACTAATAAACATTTCAAATTACTCAGTTTGAAAATGACATCTGT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACACTAATAAACATTTCAAATTACTCAGTTTGAAAATGACATCTGT  1040

seq1  TTTTTTAGTAGGCCTCTAATATACCTAGTTGTTGATCATATTTGTTTGGG  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAGTAGGCCTCTAATATACCTAGTTGTTGATCATATTTGTTTGGG  1090

seq1  TTTTTAAGTTTCATTTCAAATGAATTC  1120
      |||||||||||||||||||||||||||
seq2  TTTTTAAGTTTCATTTCAAATGAATTC  1117