BAC Information

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BAC

Clone NameB6Ng01-072F16
Chromosome2 (Build37)
Map Location 93,519,744 - 93,675,413
singlet/doubletdoublet
Overlap geneExt2
Upstream geneSyt13, LOC100042784, Trp53i11, C230071H18Rik, Tspan18, LOC100042789, LOC639658, Cd82, Alx4
Downstream gene2610203E10Rik, Gm1967, Gm1335, LOC620695, Alkbh3, Hsd17b12, E530001K10Rik, Ttc17, Itpa-ps1, Api5, LOC100043259
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-072F16.bB6Ng01-072F16.g
ACCDH889794DH889795
length1,1661,144
definitionDH889794|Mus musculus domesticus DNA, BAC clone: B6Ng01-072F16, 5' end.DH889795|Mus musculus domesticus DNA, BAC clone: B6Ng01-072F16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(93,674,232 - 93,675,413)(93,519,744 - 93,520,887)
sequence
gaattctgtttattcaggtctttggaggcccggacaggcctcagcttggg
atgtagagagaaatacttcatggtgggcgttaggaagatcttcttggtgg
agctgaaatgcctggatcaagttctgggattcacttcttacctgggaagg
agatgcctttattgctgttcccgaagatatggcctagcaatggctaggga
aggggaagggacaggaggctatatttctgaaccaaggctgtctgggggcc
aggcaaagattggtctttctgtgctaagaaagcctacgaaggagctgcct
gttccatttgaggggtgcgttagtgaagatcccaaatgaatgtctggttg
gtggcctgcatgtacagtacctagagtcacagctgcaagagtagctgagg
caggaggattacttgcacctgtaagtttgagatcaacctgggcaggagtc
acagatgcaacataaacagtggaaatcagaaaattactcctgaccccaga
atgaacccactacaagtgtgtcagtgaaaacagcatagcccaggctgacc
cagacagtcagcccaggctggcccagacagtcagttgtgccttgcaggcg
cccttcgctgtgctcaggatatcctctcgcagatgaggaaacttagtctt
agatgaaataatattccaaacctcacagctacacactcaaggacccaagt
gagagtagtttgccttggttcagaatctgtgtgtggtgggttggagagat
ggctcagagcttaagaacatttgcttttcttctgaggacttgagttccca
tggtggggctcataaccatctgtaactccagttctagggatctaattccc
cctctggccctgtgggcactgtatacacatgtgcgcgcgcacacacacac
acacacacaaagccataaaaaggaatcacatgtgtactgtttatttgtgc
gttgctttctgctgttttcttgggtggtctgtagattgcctatattttct
ggtttgttttctctgtcataagtttaattttcttcctttcttagattttt
tttttggattcccctcttcatcttctactcaatttacaattgctgatttc
tggcggccggtatctggaaataacacctacaaacaattgtaagggaagca
acatgcctcagctttc
gaattccatacctagacaatcagtacagagagtgagagccagggcagctg
gggaagaaaagaggacagagggcttttagtagattcttccggaagggaga
gacgtttaactgctctgagttttatttttggccaagctagatgcaagtca
ggaaaattccaacccagaagcttcagaatggcaagaatatatagaaatac
ccctttgtttccagcatagccaagagttggcatgctttccaccgtccctc
cagatgaagccgtttctaccgaggctgttctggaggtgccttggcctcag
ttgattcctggggcagctggagatgtcctgagctcccactgccccctccc
cccaccatgtctcagacctcctcagcttcccagtttgcggttctgtcgtc
tccagtgggtctgtcttagctcctcggatgctaagcaagtaataaaacct
atcatggcaacctggcttcctaaagagacagagaggcagatgaggagaga
ggacttcctgccagcggtcactgctcgatgaggaaactgactgagctgag
gccggccttgcctgacagcacagcaagtggccacgcttagtcctgccagc
ccggctgtgccacagagagtggttatgcccagtccagcccatctatccag
gagccccttcacagcacagggccaaggtcctggggcagacaggcactctt
ccaagtttttctttgagttgtttcttccccattttcagttctcacaacca
catctccacctttgaggaacaggatgagtggggatttaggcaaagaggca
cagctctgggttccccggcacacgctgccaggctcatgttggacacagtt
ccaatgccccatgtcccccagcagacagaaaggatcccatagaaaccacc
tctcctttactcagtcaattgccctctgggccatccttgagcagaaatcg
ctagggactcagagaaacccgaggttaaaggtcaataggatgaccctgac
tgtcagctacagagacgaacagacccagctgaggggagaagaggcaggca
atcttgccacccttcccccaggatgctaattataacttacaatttcaaac
cggggcaagcttccaattcttttcccccacccccctttgctgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_93674232_93675413
seq2: B6Ng01-072F16.b_47_1212 (reverse)

seq1  GAAAGCTGAGGCATGTTTGCTTTCCTATTAACAAATTGTTTGTAGGTGTT  50
      ||||||||||||||| |||||| ||  |||   |||||||||||||||||
seq2  GAAAGCTGAGGCATG-TTGCTTCCC--TTA--CAATTGTTTGTAGGTGTT  45

seq1  ATATTCTAGGATAACAGCCAGCAGGAAAATACAGCATATGGTAAAATGAG  100
      || ||| | |||| | |||  |||  |||| ||||| || ||||| ||||
seq2  AT-TTCCA-GATACCGGCCGCCAG--AAAT-CAGCA-ATTGTAAATTGAG  89

seq1  TAGAAGATGAAGAGGGGAAATCAAAAAAAAAAAAATCTAAGAAAAGGAAG  150
      |||||||||||||||||||  |   |||||||||||||||| ||||||||
seq2  TAGAAGATGAAGAGGGGAATCC---AAAAAAAAAATCTAAG-AAAGGAAG  135

seq1  AAAATTAAACTAATGACAGAGAAAAACAAAACAGAAAATATAGGCAATCT  200
      ||||||||||| ||||||||| |||||||| |||||||||||||||||||
seq2  AAAATTAAACTTATGACAGAG-AAAACAAACCAGAAAATATAGGCAATCT  184

seq1  ACAGACCAACCAAGAAAACAGCAGAAAGCAACGCACAAATAAACAGTACA  250
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACCACCCAAGAAAACAGCAGAAAGCAACGCACAAATAAACAGTACA  234

seq1  CATGTGATTCCTTTTTATGGCTTTGTGTGTGTGTGTGTGTGTGCGCGCGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGATTCCTTTTTATGGCTTTGTGTGTGTGTGTGTGTGTGCGCGCGC  284

seq1  ACATGTGTATACAGTGCCCACAGGGCCAGAGGGGGAATTAGATCCCTAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTGTATACAGTGCCCACAGGGCCAGAGGGGGAATTAGATCCCTAGA  334

seq1  ACTGGAGTTACAGATGGTTATGAGCCCCACCATGGGAACTCAAGTCCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAGTTACAGATGGTTATGAGCCCCACCATGGGAACTCAAGTCCTCA  384

seq1  GAAGAAAAGCAAATGTTCTTAAGCTCTGAGCCATCTCTCCAACCCACCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAAGCAAATGTTCTTAAGCTCTGAGCCATCTCTCCAACCCACCAC  434

seq1  ACACAGATTCTGAACCAAGGCAAACTACTCTCACTTGGGTCCTTGAGTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGATTCTGAACCAAGGCAAACTACTCTCACTTGGGTCCTTGAGTGT  484

seq1  GTAGCTGTGAGGTTTGGAATATTATTTCATCTAAGACTAAGTTTCCTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTGTGAGGTTTGGAATATTATTTCATCTAAGACTAAGTTTCCTCAT  534

seq1  CTGCGAGAGGATATCCTGAGCACAGCGAAGGGCGCCTGCAAGGCACAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCGAGAGGATATCCTGAGCACAGCGAAGGGCGCCTGCAAGGCACAACT  584

seq1  GACTGTCTGGGCCAGCCTGGGCTGACTGTCTGGGTCAGCCTGGGCTATGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTCTGGGCCAGCCTGGGCTGACTGTCTGGGTCAGCCTGGGCTATGC  634

seq1  TGTTTTCACTGACACACTTGTAGTGGGTTCATTCTGGGGTCAGGAGTAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCACTGACACACTTGTAGTGGGTTCATTCTGGGGTCAGGAGTAAT  684

seq1  TTTCTGATTTCCACTGTTTATGTTGCATCTGTGACTCCTGCCCAGGTTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGATTTCCACTGTTTATGTTGCATCTGTGACTCCTGCCCAGGTTGA  734

seq1  TCTCAAACTTACAGGTGCAAGTAATCCTCCTGCCTCAGCTACTCTTGCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAACTTACAGGTGCAAGTAATCCTCCTGCCTCAGCTACTCTTGCAG  784

seq1  CTGTGACTCTAGGTACTGTACATGCAGGCCACCAACCAGACATTCATTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGACTCTAGGTACTGTACATGCAGGCCACCAACCAGACATTCATTTG  834

seq1  GGATCTTCACTAACGCACCCCTCAAATGGAACAGGCAGCTCCTTCGTAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTTCACTAACGCACCCCTCAAATGGAACAGGCAGCTCCTTCGTAGG  884

seq1  CTTTCTTAGCACAGAAAGACCAATCTTTGCCTGGCCCCCAGACAGCCTTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTAGCACAGAAAGACCAATCTTTGCCTGGCCCCCAGACAGCCTTG  934

seq1  GTTCAGAAATATAGCCTCCTGTCCCTTCCCCTTCCCTAGCCATTGCTAGG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGAAATATAGCCTCCTGTCCCTTCCCCTTCCCTAGCCATTGCTAGG  984

seq1  CCATATCTTCGGGAACAGCAATAAAGGCATCTCCTTCCCAGGTAAGAAGT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATCTTCGGGAACAGCAATAAAGGCATCTCCTTCCCAGGTAAGAAGT  1034

seq1  GAATCCCAGAACTTGATCCAGGCATTTCAGCTCCACCAAGAAGATCTTCC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCCAGAACTTGATCCAGGCATTTCAGCTCCACCAAGAAGATCTTCC  1084

seq1  TAACGCCCACCATGAAGTATTTCTCTCTACATCCCAAGCTGAGGCCTGTC  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACGCCCACCATGAAGTATTTCTCTCTACATCCCAAGCTGAGGCCTGTC  1134

seq1  CGGGCCTCCAAAGACCTGAATAAACAGAATTC  1182
      ||||||||||||||||||||||||||||||||
seq2  CGGGCCTCCAAAGACCTGAATAAACAGAATTC  1166

seq1: chr2_93519744_93520887
seq2: B6Ng01-072F16.g_67_1210

seq1  GAATTCCATACCTAGACAATCAGTACAGAGAGTGAGAGCCAGGGCAGCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATACCTAGACAATCAGTACAGAGAGTGAGAGCCAGGGCAGCTG  50

seq1  GGGAAGAAAAGAGGACAGAGGGCTTTTAGTAGATTCTTCCGGAAGGGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGAAAAGAGGACAGAGGGCTTTTAGTAGATTCTTCCGGAAGGGAGA  100

seq1  GACGTTTAACTGCTCTGAGTTTTATTTTTGGCCAAGCTAGATGCAAGTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGTTTAACTGCTCTGAGTTTTATTTTTGGCCAAGCTAGATGCAAGTCA  150

seq1  GGAAAATTCCAACCCAGAAGCTTCAGAATGGCAAGAATATATAGAAATAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAATTCCAACCCAGAAGCTTCAGAATGGCAAGAATATATAGAAATAC  200

seq1  CCCTTTGTTTCCAGCATAGCCAAGAGTTGGCATGCTTTCCACCGTCCCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTGTTTCCAGCATAGCCAAGAGTTGGCATGCTTTCCACCGTCCCTC  250

seq1  CAGATGAAGCCGTTTCTACCGAGGCTGTTCTGGAGGTGCCTTGGCCTCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGAAGCCGTTTCTACCGAGGCTGTTCTGGAGGTGCCTTGGCCTCAG  300

seq1  TTGATTCCTGGGGCAGCTGGAGATGTCCTGAGCTCCCACTGCCCCCTCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTCCTGGGGCAGCTGGAGATGTCCTGAGCTCCCACTGCCCCCTCCC  350

seq1  CCCACCATGTCTCAGACCTCCTCAGCTTCCCAGTTTGCGGTTCTGTCGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCATGTCTCAGACCTCCTCAGCTTCCCAGTTTGCGGTTCTGTCGTC  400

seq1  TCCAGTGGGTCTGTCTTAGCTCCTCGGATGCTAAGCAAGTAATAAAACCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTGGGTCTGTCTTAGCTCCTCGGATGCTAAGCAAGTAATAAAACCT  450

seq1  ATCATGGCAACCTGGCTTCCTAAAGAGACAGAGAGGCAGATGAGGAGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGGCAACCTGGCTTCCTAAAGAGACAGAGAGGCAGATGAGGAGAGA  500

seq1  GGACTTCCTGCCAGCGGTCACTGCTCGATGAGGAAACTGACTGAGCTGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTCCTGCCAGCGGTCACTGCTCGATGAGGAAACTGACTGAGCTGAG  550

seq1  GCCGGCCTTGCCTGACAGCACAGCAAGTGGCCACGCTTAGTCCTGCCAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGGCCTTGCCTGACAGCACAGCAAGTGGCCACGCTTAGTCCTGCCAGC  600

seq1  CCGGCTGTGCCACAGAGAGTGGTTATGCCCAGTCCAGCCCATCTATCCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGCTGTGCCACAGAGAGTGGTTATGCCCAGTCCAGCCCATCTATCCAG  650

seq1  GAGCCCCTTCACAGCACAGGGCCAAGGTCCTGGGGCAGACAGGCACTCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCCCTTCACAGCACAGGGCCAAGGTCCTGGGGCAGACAGGCACTCTT  700

seq1  CCAAGTTTTTCTTTGAGTTGTTTCTTCCCCATTTTCAGTTCTCACAACCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTTTTTCTTTGAGTTGTTTCTTCCCCATTTTCAGTTCTCACAACCA  750

seq1  CATCTCCACCTTTGAGGAACAGGATGAGTGGGGATTTAGGCAAAGAGGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCCACCTTTGAGGAACAGGATGAGTGGGGATTTAGGCAAAGAGGCA  800

seq1  CAGCTCTGGGTTCCCCGGCACACGCTGCCAGGCTCATGTTGGACACAGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCTGGGTTCCCCGGCACACGCTGCCAGGCTCATGTTGGACACAGTT  850

seq1  CCAATGCCCCATGTCCCCCAGCAGACAGAAAGGATCCCATAGAAACCACC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGCCCCATGTCCCCCAGCAGACAGAAAGGATCCCATAGAAACCACC  900

seq1  TCTCCTTTACTCAGTCAATTGCCCTCTGGGCCATCCTTGAGCAGAACATC  950
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TCTCCTTTACTCAGTCAATTGCCCTCTGGGCCATCCTTGAGCAGAA-ATC  949

seq1  GCTAGGGACTCAGAGAAACCCGAGGTTAAAGGTCAATAGGAATGACCCTG  1000
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GCTAGGGACTCAGAGAAACCCGAGGTTAAAGGTCAATAGG-ATGACCCTG  998

seq1  ACTGTCAGCTACAGAGACGAACAGACCCAGCAGA-GGGAG-AGAGGCAGG  1048
      ||||||||||||||||||||||||||||||| || ||||| |||||||||
seq2  ACTGTCAGCTACAGAGACGAACAGACCCAGCTGAGGGGAGAAGAGGCAGG  1048

seq1  CAATC-TGCCACCC-TCCCCCAGGATGCTAATTCATAACCTTACCATTTC  1096
      ||||| |||||||| |||||||||||||||||| |||| ||||| |||||
seq2  CAATCTTGCCACCCTTCCCCCAGGATGCTAATT-ATAA-CTTACAATTTC  1096

seq1  AAACCGGGGCAGGCTTCCATTTCTTTCCCCCAACCCCACTTTGCTGCA  1144
      ||||||||||| ||||||| |||||| |||| ||||| ||||||||||
seq2  AAACCGGGGCAAGCTTCCAATTCTTTTCCCCCACCCCCCTTTGCTGCA  1144