BAC Information

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BAC

Clone NameB6Ng01-072M06
Chromosome2 (Build37)
Map Location 136,025,816 - 136,205,182
singlet/doubletdoublet
Overlap genePak7
Upstream genePlcb1, LOC100043487, LOC100043786, LOC100043788, Plcb4, 6330527O06Rik
Downstream geneLOC668910, LOC100043492, BC034902, Ankrd5, Snap25, LOC668911, Mkks, 2210009G21Rik, Jag1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-072M06.bB6Ng01-072M06.g
ACCDH890088DH890089
length1,1731,108
definitionDH890088|Mus musculus domesticus DNA, BAC clone: B6Ng01-072M06, 5' end.DH890089|Mus musculus domesticus DNA, BAC clone: B6Ng01-072M06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(136,204,004 - 136,205,182)(136,025,816 - 136,026,598)
sequence
gaattccccaaaccaaatccataagcttctttgctcagggcttggccaca
ggacatgggtggctatgcttatgggttatcatccctcctccacgtctagt
ctaccctactgaacaccagagagggcaggtgccgtgattggcaaactcat
tattgacttttcccaaaatggaattaaacccaacaaagacagaactaaaa
tgcctatcatccaagggttggagacagataggactgaagatcaccctttc
taatgaccattttctgtgctgtgtttaacacagttcattcactctgatgt
agtgtgggttgcctatagcaaggataatttgacatcctcagatacaaata
gtactttgaagggaaatttctaccctcgggagagagaagatgcaggcaaa
tggtatcctgaaacagtttagcaaaagtaaagggatagtttgtaaatgga
ttgggcactaacacaactctaggcatttttcaggagtacctgacatttaa
tatgtcctgtaaatctttaagtttaatacaccatagatactggacttttt
gtttaaacaacttcagtataaaattctaaacagtaactctaggatcagtt
tgtattctactgaaattcccaagaaaatttgaaattttctgtggttatcc
aggaaatataatggtgttaaatttttttacaagattttattttattatgt
gtgtgagtatttgcctgaatgtatagcatcgagcagagggcatcagatcc
cctcaaagtgaagttacagatatttgtgagatgtcatgtgggtgcttgga
attgagcctaggtccttggaagagcagccagtgagctatcttttccagcc
cccaaaatggtgttttatcatgctttataaaattcccctgagaagagaca
tttcataaataaaggggacaaaataattatttttccattgtactacaaat
aagcagttaaaataacctttaattacccctgggtgccaaatgtaacaata
ttttgttgttctacccccccccccccatatgctcctgattctgtcagcaa
tgcacctctgcatcatcaaagagcccactttcaactggaacctatggtcc
atcatgtcttatctatactaagaactttgacttgtagtttctaggattct
tattctaataaggacaagataaa
gaattcaagaaggtggactccagaaaatcaaataaccccattaaaaaatg
gggctcagagctaaacaaagaattctcacctgaggaatactgaatgtctg
agaagcacctgaaaaaattttcagcatccttaatcatcagggaaatgaaa
atcaaaacaaccctgagattccacctcacaccagtcagaatggctaagat
caaaaattcaggtgacagcagatgctggcgaggatgtggagaaagaggaa
cactcctccattgttggtgggattgcaagcttgtacaaccactgtgaaaa
tcagtctggcagttcctcagaaaattggacatagtactaccggaggatcc
cacaatacctctcctgggcatatatccagaagatgttccaaccggtaaga
aggacacatgctccactatgttcatagcagccttatttataatagccaga
agctggagagaacccagatgcccctcaacagaggaatggatacagaaaat
gtggtacatttacagaatggagtactactcagttaataaaaataatgaat
ttatgaaattcctaggcaaatggatgggcctggaggacatcatcttgagt
gaggtaacccaatcacaaaagaactcacacaatatgtactccctgataag
tggatattagcccagaaacttagaatgcccaaggtataagatacaatttg
caaaacacatgaaactcaaggagaacgaaaaccaaagtgtgaacactttg
ccccttcttagaattgggaacaaaacacccatgaaggagttacagagaca
aagtttggagctgagacaaaggatggaccatctagatattttaccttagt
taatctgctaatgcagtactgtatattatatgcaagaaacctaaaaaagg
aaagaaaataggattagaactcgatttaggatgtattgagaagaactaat
atatgtacagagtttttgcaccttattgtttagagggaataatgagcgat
tgaattggaatcagcttatcattttatgaccaatatgaatcaatatccta
cctgggccacgggagttacaatggaatagcagggtaaccccgtgtaagtg
agaatatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_136204004_136205182
seq2: B6Ng01-072M06.b_46_1218 (reverse)

seq1  TTTATCTTGTCC-TATTATGACTAAGAATCCTAGGAACATCAAAGTCAAA  49
      |||||||||||| ||||| || |||||||||||| ||| |  ||||||||
seq2  TTTATCTTGTCCTTATTA-GAATAAGAATCCTAGAAAC-TACAAGTCAAA  48

seq1  GTCCTAGATATAAGATAAGACCATGAATGGGACCATAGGTTCCAGTTGGA  99
      || ||   ||| |||||||| |||||   |||||||||||||||||| ||
seq2  GTTCTTAGTAT-AGATAAGA-CATGA--TGGACCATAGGTTCCAGTT-GA  93

seq1  AAGTGGGCTCTTTGATGATGCAGA-GTGCATTGCTGACAGAATCA-GAGC  147
      |||||||||||||||||||||||| |||||||||||||||||||| ||||
seq2  AAGTGGGCTCTTTGATGATGCAGAGGTGCATTGCTGACAGAATCAGGAGC  143

seq1  ATATGGGGGGGGGGGGGTAGAACAACAAAATATTGTTACATTTGGCACCC  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGGGGGGGGGGGGTAGAACAACAAAATATTGTTACATTTGGCACCC  193

seq1  AGGGGTAATTAAAGGTTATTTTAACTGCCTTATTTGTAGTACAATGGAAA  247
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AGGGGTAATTAAAGGTTATTTTAACTG-CTTATTTGTAGTACAATGGAAA  242

seq1  AATAATTATTTTTGTCCCCTTTATTTATGAAATGTCTCTTCTCAGGGGAA  297
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTA-TTTTGTCCCCTTTATTTATGAAATGTCTCTTCTCAGGGGAA  291

seq1  TTTTATAAAGCATGATAAAACACCATTTTGGGGGCTGGAAAAGATAGCTC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATAAAGCATGATAAAACACCATTTTGGGGGCTGGAAAAGATAGCTC  341

seq1  ACTGGCTGCTCTTCCAAGGACCTAGGCTCAATTCCAAGCACCCACATGAC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCTGCTCTTCCAAGGACCTAGGCTCAATTCCAAGCACCCACATGAC  391

seq1  ATCTCACAAATATCTGTAACTTCACTTTGAGGGGATCTGATGCCCTCTGC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCACAAATATCTGTAACTTCACTTTGAGGGGATCTGATGCCCTCTGC  441

seq1  TCGATGCTATACATTCAGGCAAATACTCACACACATAATAAAATAAAATC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGATGCTATACATTCAGGCAAATACTCACACACATAATAAAATAAAATC  491

seq1  TTGTAAAAAAATTTAACACCATTATATTTCCTGGATAACCACAGAAAATT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAAAAAATTTAACACCATTATATTTCCTGGATAACCACAGAAAATT  541

seq1  TCAAATTTTCTTGGGAATTTCAGTAGAATACAAACTGATCCTAGAGTTAC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATTTTCTTGGGAATTTCAGTAGAATACAAACTGATCCTAGAGTTAC  591

seq1  TGTTTAGAATTTTATACTGAAGTTGTTTAAACAAAAAGTCCAGTATCTAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAGAATTTTATACTGAAGTTGTTTAAACAAAAAGTCCAGTATCTAT  641

seq1  GGTGTATTAAACTTAAAGATTTACAGGACATATTAAATGTCAGGTACTCC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTATTAAACTTAAAGATTTACAGGACATATTAAATGTCAGGTACTCC  691

seq1  TGAAAAATGCCTAGAGTTGTGTTAGTGCCCAATCCATTTACAAACTATCC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAATGCCTAGAGTTGTGTTAGTGCCCAATCCATTTACAAACTATCC  741

seq1  CTTTACTTTTGCTAAACTGTTTCAGGATACCATTTGCCTGCATCTTCTCT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACTTTTGCTAAACTGTTTCAGGATACCATTTGCCTGCATCTTCTCT  791

seq1  CTCCCGAGGGTAGAAATTTCCCTTCAAAGTACTATTTGTATCTGAGGATG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCGAGGGTAGAAATTTCCCTTCAAAGTACTATTTGTATCTGAGGATG  841

seq1  TCAAATTATCCTTGCTATAGGCAACCCACACTACATCAGAGTGAATGAAC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATTATCCTTGCTATAGGCAACCCACACTACATCAGAGTGAATGAAC  891

seq1  TGTGTTAAACACAGCACAGAAAATGGTCATTAGAAAGGGTGATCTTCAGT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTAAACACAGCACAGAAAATGGTCATTAGAAAGGGTGATCTTCAGT  941

seq1  CCTATCTGTCTCCAACCCTTGGATGATAGGCATTTTAGTTCTGTCTTTGT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATCTGTCTCCAACCCTTGGATGATAGGCATTTTAGTTCTGTCTTTGT  991

seq1  TGGGTTTAATTCCATTTTGGGAAAAGTCAATAATGAGTTTGCCAATCACG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTTAATTCCATTTTGGGAAAAGTCAATAATGAGTTTGCCAATCACG  1041

seq1  GCACCTGCCCTCTCTGGTGTTCAGTAGGGTAGACTAGACGTGGAGGAGGG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCTGCCCTCTCTGGTGTTCAGTAGGGTAGACTAGACGTGGAGGAGGG  1091

seq1  ATGATAACCCATAAGCATAGCCACCCATGTCCTGTGGCCAAGCCCTGAGC  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATAACCCATAAGCATAGCCACCCATGTCCTGTGGCCAAGCCCTGAGC  1141

seq1  AAAGAAGCTTATGGATTTGGTTTGGGGAATTC  1179
      ||||||||||||||||||||||||||||||||
seq2  AAAGAAGCTTATGGATTTGGTTTGGGGAATTC  1173

seq1: chr2_136025816_136026598
seq2: B6Ng01-072M06.g_405_1176

seq1  CTACCGGAGGATCCCACAATACCTCTCCTGGGCATATATCCAGAAGATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCGGAGGATCCCACAATACCTCTCCTGGGCATATATCCAGAAGATGT  50

seq1  TCCAACCGGTAAGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACCGGTAAGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTAT  100

seq1  TTATAATAGCCAGAAGCTGGAGAGAACCCAGATGCCCCTCAACAGAGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATAGCCAGAAGCTGGAGAGAACCCAGATGCCCCTCAACAGAGGAA  150

seq1  TGGATACAGAAAATGTGGTACATTTACAGAATGGAGTACTACTCAGTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATACAGAAAATGTGGTACATTTACAGAATGGAGTACTACTCAGTTAA  200

seq1  TAAAAATAATGAATTTATGAAATTCCTAGGCAAATGGATGGGCCTGGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATAATGAATTTATGAAATTCCTAGGCAAATGGATGGGCCTGGAGG  250

seq1  ACATCATCTTGAGTGAGGTAACCCAATCACAAAAGAACTCACACAATATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCATCTTGAGTGAGGTAACCCAATCACAAAAGAACTCACACAATATG  300

seq1  TACTCCCTGATAAGTGGATATTAGCCCAGAAACTTAGAATGCCCAAGGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCCCTGATAAGTGGATATTAGCCCAGAAACTTAGAATGCCCAAGGTA  350

seq1  TAAGATACAATTTGCAAAACACATGAAACTCAAGGAGAACGAAAACCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATACAATTTGCAAAACACATGAAACTCAAGGAGAACGAAAACCAAA  400

seq1  GTGTGAACACTTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAACACTTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATGAAG  450

seq1  GAGTTACAGAGACAAAGTTTGGAGCTGAGACAAAAGGATGGACCATCTAG  500
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GAGTTACAGAGACAAAGTTTGGAGCTGAGAC-AAAGGATGGACCATCTAG  499

seq1  ATATTTTACCTTAGTTAATCTGCTAATGCAGTACTGTATATTTATATGCA  550
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ATATTTTACCTTAGTTAATCTGCTAATGCAGTACTGTATA-TTATATGCA  548

seq1  AGAAACCTAAAAAAGGAAAGAAAAATAGGATTCAGAACTCGATTTAGGAT  600
      |||||||||||||||||||| ||||||||||| |||||||||||||||||
seq2  AGAAACCTAAAAAAGGAAAG-AAAATAGGATT-AGAACTCGATTTAGGAT  596

seq1  GTATTGAGAAAGAAACTAATATAATGTAACAGAGTTTTTTGCACCTTATT  650
      ||||||||||   ||||||||| |||| |||||| |||||||||||||||
seq2  GTATTGAGAA--GAACTAATAT-ATGT-ACAGAG-TTTTTGCACCTTATT  641

seq1  GTTTAGAGGGAATAATGAGCGATTGAATTGAAATCAGCTAATCATTTTAT  700
      |||||||||||||||||||||||||||||| |||||||| ||||||||||
seq2  GTTTAGAGGGAATAATGAGCGATTGAATTGGAATCAGCTTATCATTTTAT  691

seq1  TGAGCCAAATATGATACAATATCCTACCT-GGCCACAGGAAGTTACAAT-  748
         | | |||||||  ||||||||||||| |||||| || ||||||||| 
seq2  ---GACCAATATGAATCAATATCCTACCTGGGCCAC-GGGAGTTACAATG  737

seq1  GAATAGCAGTGGTAACCCC-AGTGAGTGAGAATATC  783
      ||||||||| |||||||||  || ||||||||||||
seq2  GAATAGCAG-GGTAACCCCGTGTAAGTGAGAATATC  772