BAC Information

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BAC

Clone NameB6Ng01-072P22
Chromosome2 (Build37)
Map Location 113,166,705 - 113,167,855
singlet/doubletsinglet
Overlap genenone
Upstream geneSlc12a6, Tmem85, EG668839, 2410042D21Rik, 2900064A13Rik, Chrm5, Aven, Ryr3, 4930563P21Rik
Downstream geneFmn1, Grem1, LOC100043520, Scg5, Arhgap11a, LOC100043526, Gja9, A530058N18Rik, Actc1, Aqr, Zfp770
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-072P22.bB6Ng01-072P22.g
ACCDH890254DH890255
length1,145818
definitionDH890254|Mus musculus domesticus DNA, BAC clone: B6Ng01-072P22, 5' end.DH890255|Mus musculus domesticus DNA, BAC clone: B6Ng01-072P22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactttagatagatatgtggattgaagaggagtatgaacagctct
atctatctatctatctatctatcatgcattcatccatctggcatctatta
ttagcatttagctaatattttaagagtaaatcagagttctcacaaattat
aaaaaatgttcaaaagaaaattcaacttataccttctcaaatattttcat
acccatcattttatactactagggatagaattctgattttaagtaccaga
tggtggattttgtatttatgtgggagtggattaaaggcaatgccctttcc
tgcctacctgcttggaaaagatccccaaatcacataccacatctcaatgt
catttagacctctaatcctcttatgaaagctttcctggtttgagctgtaa
tcatcagtagttagacctttatttggaacaaaacagtgtgtctgggtttg
aaggtctgtactgagttagcaacactctaacagtgattgcaaagagcctt
gcctatgcaagggtcacacaagcaggctctctgacttgcaagacctgggc
cccttccctgcatcgccgaggtccaaacatttttctacttaaaccgattt
agctgttgagtcttttaggagaagatcagtttggaggcagctgggaggtt
gggcaaagaccaggctagaggactaacataaacataaagatttggctttc
atcaagtgtttcaattttagaccatggtatagtaccaggaaccaaagggc
ctggccaggtctctaaagctagcgaatcttgggaaagctgaagccagcag
cttccctcccccatcacttccagccagtccgagcgtgcgccctgggacat
agcccgcaccggcaagcaaggagggcttgcctccgaggacaagatgtcgc
cttcgccgttcacttagacttagctcaaagactaccatattgacccagcg
gtcaggtcccaggccacgcagtgacagttcagcaatccagcgaggaatcg
cactcggtcagtattttggcgctgaggttttctgcccgcctttctatccc
tggctcggcaagcgctgccatccaatgggtcgagatgactgtctatcaat
tcattggcacacctccccccaaacaactgtcagcagcgcgtgtta
gaattctagaaagtgtttaatatctatgtttctgtcttcacccatttttc
attgagcagagagttggtcagttcccatgagtttctaagctttctgttgt
gtctcctattggtgatgcccagctttaatctgcagtgggatgataagata
catttcaattttctcttactcgtttggacttgcttcatgagtatgtgatc
aattttggagaaagtgccctgaggtactgagaagaagatatgttcttttg
tgtttgggtgaatatctattaggtccatatggtttataactaacatttgt
taattccagcatttctgtttagtttttgtctccatgacccatctataggc
aagtatggtactgaagtctcccactatcagtgtgtgaggatcaatgtgtt
atctaagctacagtagagtttcttttacaaaagtgagtgtctctgtgaca
tagatcttaagaattaaaatgtcatctttgtagttcttctttggatgggt
attaagggtccttccccatctcttttgattagttttggtttgaagtctgt
ttggttagatattaaaatggctacaccaacttgcttcttggacctatttg
atttgtacagcttttttcaatgctttatccagaggtaatgtgtatccatg
acactgaggtatgcttcttggaggcagtagaaagatggattctggtttct
cattaattttgttagtctgtgtctttttattggagaattgagaccactga
tattgagagatatcaatgaccagtgaatattgatgcctgttattttgttg
ttgttgttagcgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_113166705_113167855
seq2: B6Ng01-072P22.b_45_1189

seq1  GAATTCACTTTAGATAGATATGTGGATTGAAGAGGAGTATGAACAGCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTAGATAGATATGTGGATTGAAGAGGAGTATGAACAGCTCT  50

seq1  ATCTATCTATCTATCTATCTATCATGCATTCATCCATCTGGCATCTATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATCTATCTATCTATCTATCATGCATTCATCCATCTGGCATCTATTA  100

seq1  TTAGCATTTAGCTAATATTTTAAGAGTAAATCAGAGTTCTCACAAATTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCATTTAGCTAATATTTTAAGAGTAAATCAGAGTTCTCACAAATTAT  150

seq1  AAAAAATGTTCAAAAGAAAATTCAACTTATACCTTCTCAAATATTTTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATGTTCAAAAGAAAATTCAACTTATACCTTCTCAAATATTTTCAT  200

seq1  ACCCATCATTTTATACTACTAGGGATAGAATTCTGATTTTAAGTACCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATCATTTTATACTACTAGGGATAGAATTCTGATTTTAAGTACCAGA  250

seq1  TGGTGGATTTTGTATTTATGTGGGAGTGGATTAAAGGCAATGCCCTTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGATTTTGTATTTATGTGGGAGTGGATTAAAGGCAATGCCCTTTCC  300

seq1  TGCCTACCTGCTTGGAAAAGATCCCCAAATCACATACCACATCTCAATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTACCTGCTTGGAAAAGATCCCCAAATCACATACCACATCTCAATGT  350

seq1  CATTTAGACCTCTAATCCTCTTATGAAAGCTTTCCTGGTTTGAGCTGTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAGACCTCTAATCCTCTTATGAAAGCTTTCCTGGTTTGAGCTGTAA  400

seq1  TCATCAGTAGTTAGACCTTTATTTGGAACAAAACAGTGTGTCTGGGTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCAGTAGTTAGACCTTTATTTGGAACAAAACAGTGTGTCTGGGTTTG  450

seq1  AAGGTCTGTACTGAGTTAGCAACACTCTAACAGTGATTGCAAAGAGCCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCTGTACTGAGTTAGCAACACTCTAACAGTGATTGCAAAGAGCCTT  500

seq1  GCCTATGCAAGGGTCACACAAGCAGGCTCTCTGACTTGCAAGACCTGGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTATGCAAGGGTCACACAAGCAGGCTCTCTGACTTGCAAGACCTGGGC  550

seq1  CCCTTCCCTGCATCGCCGAGGTCCAAACATTTTTCTACTTAAACCGATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCCCTGCATCGCCGAGGTCCAAACATTTTTCTACTTAAACCGATTT  600

seq1  AGCTGTTGAGTCTTTTAGGAGAAGATCAGTTTGGAGGCAGCTGGGAGGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTTGAGTCTTTTAGGAGAAGATCAGTTTGGAGGCAGCTGGGAGGTT  650

seq1  GGGCAAAGACCAGGCTAGAGGACTAACATAAACATAAAGATTTGGCTTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAAAGACCAGGCTAGAGGACTAACATAAACATAAAGATTTGGCTTTC  700

seq1  ATCAAGTGTTTCAATTTTAGACCATGGTATAGTACCAGGAACCAAAGGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGTGTTTCAATTTTAGACCATGGTATAGTACCAGGAACCAAAGGGC  750

seq1  CTGGCCAGGTCTCTAAAGCTAGCGAATCTTGGGAAAGCTGAAGCCAGCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCAGGTCTCTAAAGCTAGCGAATCTTGGGAAAGCTGAAGCCAGCAG  800

seq1  CTTCCCTCCCCCATCACTTCCAGCCAGTCCGAGCGTGCGCCCTGGGACAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCTCCCCCATCACTTCCAGCCAGTCCGAGCGTGCGCCCTGGGACAT  850

seq1  AGCCCGCACCGGCAAGCAAGGAGGGCTTGCCTCCGAGGACAAGATGTCGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCGCACCGGCAAGCAAGGAGGGCTTGCCTCCGAGGACAAGATGTCGC  900

seq1  CTTCGCCGTTCACTTAGACTTAGCTCAAAGACTACCATATTTGACCCAGC  950
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CTTCGCCGTTCACTTAGACTTAGCTCAAAGACTACCATA-TTGACCCAGC  949

seq1  GGTCAGGTCCCAGGCCACGCAGTGACAGTTCAGCAATCCAGCGAGGAATC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGGTCCCAGGCCACGCAGTGACAGTTCAGCAATCCAGCGAGGAATC  999

seq1  GCACTCGGTCAGTTATTTTGGCGCTGAGGTTTTCTGCCCGCCTTCCTATC  1050
      |||||||||||| ||||||||||||||||||||||||||||||| |||| 
seq2  GCACTCGGTCAG-TATTTTGGCGCTGAGGTTTTCTGCCCGCCTTTCTAT-  1047

seq1  CCCTGGCTCGGCAGCCGCTGCACATTCCCATTGGTCGAGATGACTGTCTA  1100
      |||||||||||||  |||||| || ||| || ||||||||||||||||||
seq2  CCCTGGCTCGGCAAGCGCTGC-CA-TCCAATGGGTCGAGATGACTGTCTA  1095

seq1  TCAGTCCATT-GCACACCT-CCCCCAAACAGCCTGTCAAGCAGGCGCGTG  1148
      ||| | |||| |||||||| ||||||||||  ||||| |||| |||||||
seq2  TCAATTCATTGGCACACCTCCCCCCAAACA-ACTGTC-AGCA-GCGCGTG  1142

seq1  TTA  1151
      |||
seq2  TTA  1145