BAC Information

Click to search

BAC

Clone NameB6Ng01-073G16
Chromosome2 (Build37)
Map Location 88,160,376 - 88,305,876
singlet/doubletdoublet
Overlap geneOlfr1175, Olfr1176, Olfr1177, Olfr1178, Olfr1179, Olfr1180, Olfr1181, Olfr1182, Olfr1183
Upstream geneOlfr1119-ps1, Olfr1120, Olfr1121, Olfr1122, LOC668432, Olfr1123, Olfr1125, Olfr1126, Pramel7, Pramel6, LOC668439, Olfr1127-ps1, Olfr253-ps1, Olfr1128, LOC100042038, LOC668445, LOC668447, Olfr1129, Olfr1130, Olfr1131, Olfr1132, LOC100042076, Olfr1133, Olfr1134, Olfr1135, Olfr1136, Olfr1137, Olfr1138, GA_x5J8B7W3Y5M-1033291-1033773, Olfr1140, Olfr1141, Olfr152, Olfr1142-ps1, Olfr1143, GA_x5J8B7W3Y5M-1094074-1093275, Olfr1145, Olfr1146-ps1, Olfr1147-ps1, Olfr1148, Olfr1149-ps1, Olfr1150-ps1, Olfr1151, Olfr1152, Olfr1153, Olfr1154, Olfr1155, Olfr1156, Olfr1157, Olfr74, Olfr1158, Olfr1159-ps1, Olfr1160, Olfr1161, Olfr73, Olfr1162, Olfr1163, Olfr1164, Olfr1165, Olfr1166, Olfr1167, Olfr1168, Olfr1169-ps1, Olfr1170, Olfr1171-ps1, Olfr1172-ps1, Olfr1173, Olfr1174
Downstream geneOlfr1184, Olfr1185-ps1, Olfr1186, Olfr1187-ps1, Olfr1188, LOC668528, Olfr1189, GA_x5J8B7W4NS2-37772-38277, Olfr475-ps1, Olfr526-ps1, Olfr1192-ps1, Olfr1193, Olfr1194-ps1, Olfr1195, Olfr1196, Olfr1197, Olfr1198, Olfr1199, Olfr1200, Olfr1201, Olfr1202, Olfr1203, Olfr1204, Olfr1206, Olfr1208, Olfr1209, Olfr1211, Olfr1212, Olfr1213, Olfr1214, Olfr1215, Olfr1216, Olfr1217, Olfr1218, Olfr1219, Olfr1220, Olfr1221, Olfr1222, Olfr1223, Olfr1224-ps1, Olfr1225, LOC435676, Olfr1226, LOC100042983, GA_x5J8B7TTH1T-1160-261, Olfr1227-ps1, Olfr1228, Olfr1229, Olfr1230, Olfr1231, Olfr1232, Olfr1233, Olfr1234, Olfr1235-ps1, GA_x5J8B7W62NC-668773-668438, Olfr1237-ps1, Olfr1238, Olfr1239, Olfr1240
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-073G16.bB6Ng01-073G16.g
ACCDH890556DH890557
length1,127989
definitionDH890556|Mus musculus domesticus DNA, BAC clone: B6Ng01-073G16, 5' end.DH890557|Mus musculus domesticus DNA, BAC clone: B6Ng01-073G16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(88,160,376 - 88,161,504)(88,304,905 - 88,305,876)
sequence
gaattcctatagtatcatcattttaagaattaaaagtcacatatttgttt
atatagaatcactacaagacagtatacttgattgttctgtataattctgc
tcaaaagggttggctaatacccagggattactatgtttatttaataacaa
ccaaaaaagcatattgatagcaggaatctttcctataatgaaattctcct
gggccatcactacagaaacaaatgttctgtagatttatatcaaaggcatg
cctatctcaggaagatcacctgctagtttttagcttctccttcttggctc
ctggcagtcagtcatttaaaggttttagaaaatcattgaacattgtcatt
tctatgttatatattgatattattatcaatgaaaatattaaaggaataag
tgtactttatgaataataaaatggtttcaacgtaatgtgtcacttcacat
tctattctgagtttctgatttagaaccctgaagtattataagttgtgggt
aatattcttacactgtccctgatacatgatttatgttgcgtactacagaa
attcacaaaaatctaacaggaaattgttccatgatttttagaatacattt
aactaatgtgattccacatccaacaaaccagtagtcacatgtttcactga
agaaccaagattgaaaaatattatcaaactggccccatacaatactccaa
gctgctcaaaagtcaatgtcaaggaacctcagcaattttctactaattga
ttactggtctgttaatattattgttcagtattgttttttttaatcagtga
ataaaacatgcatatttgtattagttatatcaacatagtggctgttatga
tttactggaatagaattagatttccttaaatacttattagaaactattca
aatagcaattttaattagcaatacagagataaagctatgtagaaatattg
actaaaaatttatataggttaagtaatgtttgttaccagtgtttatacaa
gttgcataaagatgtaactttgagagttcaaacctctattaaaaatgggt
atagtgatggataattttaattgtagtagcctgcaaagcagggatgggcc
aatagggaatctggaagatccagagct
gaattctgcaggagtgggaacaagatttggttaacattgggatgtaaata
aataaaaaaattgaaaaattcttgatgtactagcataaaaagactgtaat
tcttgtgtagaattttgaaaaatactatggccaaattaacttgaaagaga
aattggcttatttagttggtcagtttgaggatatggttcattatagaagg
ataattatgatgtcagtagtgtgtggcttcttgtctattgcatccacagc
caggaagcagagacagaaaaccacaatctccctctttttattcagttcaa
aagaacccaggccatggcattgcattatctacagctaaggtatgtcttcc
tacctaatcaatataaggtagatcatcccccacaggcatgcccagatgct
tatcttctctgtcatcccagttcttttttcagtgacattcaacattacag
ttgcaatttctacatttcagttgagtacgctagattttgatggaggccac
cttctgtaaccaagcaggacccataatgaataaataaagacaccaaccca
cccacaaactttcaaccccaaatttattccatctaaatgaaatgcaagga
cacagagagagagagagagcagaatctaaggaatggtttgcccttaggca
agcaccaatccctgccattaatgatattctcttatgaagtggggttggcc
taatgcttatgttataatgttaagtttgtgcctcaaaactgcttacagtg
gtatctgcccgtaagacactgagggaccctgcccccagttggctctaatt
ggtaaaaatgattccagcactctataggaggaacaacaatatgaactaac
cagtaacccccatagctcgtgtctctggctgcatatgtagcagaggtggc
ctagttggcatcaatgggaggagagggccttgaactgtgaaaacatatgt
ccaatacaagggaatgcagatctagaagcaagattgggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_88160376_88161504
seq2: B6Ng01-073G16.b_42_1168

seq1  GAATTCCTATAGTATCATCATTTTAAGAATTAAAAGTCACATATTTGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTATAGTATCATCATTTTAAGAATTAAAAGTCACATATTTGTTT  50

seq1  ATATAGAATCACTACAAGACAGTATACTTGATTGTTCTGTATAATTCTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGAATCACTACAAGACAGTATACTTGATTGTTCTGTATAATTCTGC  100

seq1  TCAAAAGGGTTGGCTAATACCCAGGGATTACTATGTTTATTTAATAACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAGGGTTGGCTAATACCCAGGGATTACTATGTTTATTTAATAACAA  150

seq1  CCAAAAAAGCATATTGATAGCAGGAATCTTTCCTATAATGAAATTCTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAAAAGCATATTGATAGCAGGAATCTTTCCTATAATGAAATTCTCCT  200

seq1  GGGCCATCACTACAGAAACAAATGTTCTGTAGATTTATATCAAAGGCATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCATCACTACAGAAACAAATGTTCTGTAGATTTATATCAAAGGCATG  250

seq1  CCTATCTCAGGAAGATCACCTGCTAGTTTTTAGCTTCTCCTTCTTGGCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATCTCAGGAAGATCACCTGCTAGTTTTTAGCTTCTCCTTCTTGGCTC  300

seq1  CTGGCAGTCAGTCATTTAAAGGTTTTAGAAAATCATTGAACATTGTCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCAGTCAGTCATTTAAAGGTTTTAGAAAATCATTGAACATTGTCATT  350

seq1  TCTATGTTATATATTGATATTATTATCAATGAAAATATTAAAGGAATAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGTTATATATTGATATTATTATCAATGAAAATATTAAAGGAATAAG  400

seq1  TGTACTTTATGAATAATAAAATGGTTTCAACGTAATGTGTCACTTCACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTTTATGAATAATAAAATGGTTTCAACGTAATGTGTCACTTCACAT  450

seq1  TCTATTCTGAGTTTCTGATTTAGAACCCTGAAGTATTATAAGTTGTGGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTCTGAGTTTCTGATTTAGAACCCTGAAGTATTATAAGTTGTGGGT  500

seq1  AATATTCTTACACTGTCCCTGATACATGATTTATGTTGCGTACTACAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCTTACACTGTCCCTGATACATGATTTATGTTGCGTACTACAGAA  550

seq1  ATTCACAAAAATCTAACAGGAAATTGTTCCATGATTTTTAGAATACATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACAAAAATCTAACAGGAAATTGTTCCATGATTTTTAGAATACATTT  600

seq1  AACTAATGTGATTCCACATCCAACAAACCAGTAGTCACATGTTTCACTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAATGTGATTCCACATCCAACAAACCAGTAGTCACATGTTTCACTGA  650

seq1  AGAACCAAGATTGAAAAATATTATCAAACTGGCCCCATACAATACTCCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCAAGATTGAAAAATATTATCAAACTGGCCCCATACAATACTCCAA  700

seq1  GCTGCTCAAAAGTCAATGTCAAGGAACCTCAGCAATTTTCTACTAATTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTCAAAAGTCAATGTCAAGGAACCTCAGCAATTTTCTACTAATTGA  750

seq1  TTACTGGTCTGTTAATATTATTGTTCAGTATTGTTTTTTTTAATCAGTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGGTCTGTTAATATTATTGTTCAGTATTGTTTTTTTTAATCAGTGA  800

seq1  ATAAAACATGCATATTTGTATTAGTTATATCAACATAGTGGCTGTTATGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAACATGCATATTTGTATTAGTTATATCAACATAGTGGCTGTTATGA  850

seq1  TTTACTGGAATAGAATTAGATTTCCTTAAATACTTATTAGAAACTATTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTGGAATAGAATTAGATTTCCTTAAATACTTATTAGAAACTATTCA  900

seq1  AATAGCAATTTTAATTAGCAATTACAGAGATAAAGCTATGTAGAAATATT  950
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AATAGCAATTTTAATTAGCAA-TACAGAGATAAAGCTATGTAGAAATATT  949

seq1  GACTAAAAATTTATATAGGTTAAGGTATATGTTTGTTACCAAGTGTTTAT  1000
      ||||||||||||||||||||||| ||| |||||||||||| |||||||||
seq2  GACTAAAAATTTATATAGGTTAA-GTA-ATGTTTGTTACC-AGTGTTTAT  996

seq1  ACAAGTTGCAT-AAGATGTAACTTTGAGAGTTTCAAACCTCTATTAAAAA  1049
      ||||||||||| |||||||||||||||||| |||||||||||||| ||||
seq2  ACAAGTTGCATAAAGATGTAACTTTGAGAG-TTCAAACCTCTATT-AAAA  1044

seq1  ATGTGTATAGTGATGGATAATTTTAATTGTAGTAG-CTGCAAAGCAGGGA  1098
      ||| ||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ATGGGTATAGTGATGGATAATTTTAATTGTAGTAGCCTGCAAAGCAGGGA  1094

seq1  T-GGACAATAGGGAATCTG--AGACTACAGAGCT  1129
      | || ||||||||||||||  ||| | |||||||
seq2  TGGGCCAATAGGGAATCTGGAAGA-TCCAGAGCT  1127

seq1: chr2_88304905_88305876
seq2: B6Ng01-073G16.g_68_1034 (reverse)

seq1  GCATTCCCTTGTACTGGGACATATGGTTTTCACAAGTTCAAGGCCCTCTC  50
      ||||||||||||| | |||||||| |||||||| ||||||||||||||||
seq2  GCATTCCCTTGTA-TTGGACATAT-GTTTTCAC-AGTTCAAGGCCCTCTC  47

seq1  CTCCCATTGATGGCCAACTAGGCCATCCTCTGCTACATATGCAGCCAGAG  100
      ||||||||||| ||||||||||||| ||||||||||||||||||||||||
seq2  CTCCCATTGAT-GCCAACTAGGCCA-CCTCTGCTACATATGCAGCCAGAG  95

seq1  ACACGAGCTATGGGGGTTACTGGTTAGTTCATATTGTTGTTCCTCCTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGAGCTATGGGGGTTACTGGTTAGTTCATATTGTTGTTCCTCCTATA  145

seq1  GAGTGCTGGAATCATTTTTACCAATTAGAGCCAACTGGGGGCAGGGTCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCTGGAATCATTTTTACCAATTAGAGCCAACTGGGGGCAGGGTCCC  195

seq1  TCAGTGTCTTACGGGCAGATACCACTGTAAGCAGTTTTGAGGCACAAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGTCTTACGGGCAGATACCACTGTAAGCAGTTTTGAGGCACAAACT  245

seq1  TAACATTATAACATAAGCATTAGGCCAACCCCACTTCATAAGAGAATATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATTATAACATAAGCATTAGGCCAACCCCACTTCATAAGAGAATATC  295

seq1  ATTAATGGCAGGGATTGGTGCTTGCCTAAGGGCAAACCATTCCTTAGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATGGCAGGGATTGGTGCTTGCCTAAGGGCAAACCATTCCTTAGATT  345

seq1  CTGCTCTCTCTCTCTCTCTGTGTCCTTGCATTTCATTTAGATGGAATAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCTCTCTCTCTCTCTGTGTCCTTGCATTTCATTTAGATGGAATAAA  395

seq1  TTTGGGGTTGAAAGTTTGTGGGTGGGTTGGTGTCTTTATTTATTCATTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGGTTGAAAGTTTGTGGGTGGGTTGGTGTCTTTATTTATTCATTAT  445

seq1  GGGTCCTGCTTGGTTACAGAAGGTGGCCTCCATCAAAATCTAGCGTACTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCCTGCTTGGTTACAGAAGGTGGCCTCCATCAAAATCTAGCGTACTC  495

seq1  AACTGAAATGTAGAAATTGCAACTGTAATGTTGAATGTCACTGAAAAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAAATGTAGAAATTGCAACTGTAATGTTGAATGTCACTGAAAAAAG  545

seq1  AACTGGGATGACAGAGAAGATAAGCATCTGGGCATGCCTGTGGGGGATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGGATGACAGAGAAGATAAGCATCTGGGCATGCCTGTGGGGGATGA  595

seq1  TCTACCTTATATTGATTAGGTAGGAAGACATACCTTAGCTGTAGATAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCTTATATTGATTAGGTAGGAAGACATACCTTAGCTGTAGATAATG  645

seq1  CAATGCCATGGCCTGGGTTCTTTTGAACTGAATAAAAAGAGGGAGATTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCCATGGCCTGGGTTCTTTTGAACTGAATAAAAAGAGGGAGATTGT  695

seq1  GGTTTTCTGTCTCTGCTTCCTGGCTGTGGATGCAATAGACAAGAAGCCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTCTGTCTCTGCTTCCTGGCTGTGGATGCAATAGACAAGAAGCCAC  745

seq1  ACACTACTGACATCATAATTATCCTTCTATAATGAACCATATCCTCAAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTACTGACATCATAATTATCCTTCTATAATGAACCATATCCTCAAAC  795

seq1  TGACCAACTAAATAAGCCAATTTCTCTTTCAAGTTAATTTGGCCATAGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCAACTAAATAAGCCAATTTCTCTTTCAAGTTAATTTGGCCATAGTA  845

seq1  TTTTTCAAAATTCTACACAAGAATTACAGTCTTTTTATGCTAGTACATCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCAAAATTCTACACAAGAATTACAGTCTTTTTATGCTAGTACATCA  895

seq1  AGAATTTTTCAATTTTTTTATTTATTTACATCCCAATGTTAACCAAATCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTTTCAATTTTTTTATTTATTTACATCCCAATGTTAACCAAATCT  945

seq1  TGTTCCCACTCCTGCAGAATTC  972
      ||||||||||||||||||||||
seq2  TGTTCCCACTCCTGCAGAATTC  967